prot_L-elsbetiae_contig16402.4355.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig16402.4355.1
Unique Nameprot_L-elsbetiae_contig16402.4355.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length305
Homology
BLAST of mRNA_L-elsbetiae_contig16402.4355.1 vs. uniprot
Match: D8LEQ7_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEQ7_ECTSI)

HSP 1 Score: 144 bits (363), Expect = 2.810e-37
Identity = 78/124 (62.90%), Postives = 79/124 (63.71%), Query Frame = 0
Query:  135 AVAPAAGNDFGGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLSSLSLEEVPYDRDLRWCNTASDSRPRPKMDPSGGVFGRVGTAITQDTGDYERLDRHYQELWKDRE---------PRGGSS 249
            A AP AGN FGG A                            V  SLSLEEVPYDRDLRWCNTASDSRPRPKMDP GGVFGRVGTAIT DTGDYERLDRHYQELWKDRE         PRGG+S
Sbjct:  151 APAPVAGNGFGGGAVRKVHPGMLESEFLAATEQANGGVEGGVV--SLSLEEVPYDRDLRWCNTASDSRPRPKMDPQGGVFGRVGTAITHDTGDYERLDRHYQELWKDREENGPPPAGGPRGGNS 272          
BLAST of mRNA_L-elsbetiae_contig16402.4355.1 vs. uniprot
Match: A0A6H5KDB0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDB0_9PHAE)

HSP 1 Score: 144 bits (362), Expect = 5.720e-35
Identity = 77/122 (63.11%), Postives = 77/122 (63.11%), Query Frame = 0
Query:  135 AVAPAAGNDFGGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLSSLSLEEVPYDRDLRWCNTASDSRPRPKMDPSGGVFGRVGTAITQDTGDYERLDRHYQELWKDREPRGGSSGRGRNGG 256
            A AP AGN FGG A                            V  SLSLEEVPYDRDLRWCNTASDSRPRPKMDP GGVFGRVGTAIT DTGDYERLDRHYQELWKDRE  G     G  GG
Sbjct:  154 APAPVAGNGFGGGAVRKVHPGMLESEFLAATEQANGGVEGGAV--SLSLEEVPYDRDLRWCNTASDSRPRPKMDPQGGVFGRVGTAITHDTGDYERLDRHYQELWKDREENGPPPASGPRGG 273          
BLAST of mRNA_L-elsbetiae_contig16402.4355.1 vs. uniprot
Match: A0A6V1NUB3_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NUB3_HETAK)

HSP 1 Score: 60.5 bits (145), Expect = 9.890e-7
Identity = 27/58 (46.55%), Postives = 37/58 (63.79%), Query Frame = 0
Query:  181 LSLEEVPYDRDLRWCNTASDSRPRPKMDPSGGVFGRVGTAITQDTGDYERLDRHYQEL 238
            LSL+EVPYDRDL+WCN AS++RPR  +     +F +V         +Y +LD HY+ L
Sbjct:   39 LSLDEVPYDRDLKWCNQASNARPRRTVGKGHRMFQQVADITEGAVQEYGQLDSHYRAL 96          
BLAST of mRNA_L-elsbetiae_contig16402.4355.1 vs. uniprot
Match: A0A7S2RK49_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RK49_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 5.870e-6
Identity = 26/58 (44.83%), Postives = 36/58 (62.07%), Query Frame = 0
Query:  181 LSLEEVPYDRDLRWCNTASDSRPRPKMDPSGGVFGRVGTAITQDTGDYERLDRHYQEL 238
            LSL++V YDRD+RW N  SD+RPR  +      F ++  +I  DT +Y  LD HY+ L
Sbjct:   73 LSLDQVSYDRDMRWFNKPSDARPRRTLGKGSRAFNQI-ESIANDTREYAALDDHYRRL 129          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16402.4355.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LEQ7_ECTSI2.810e-3762.90Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KDB0_9PHAE5.720e-3563.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6V1NUB3_HETAK9.890e-746.55Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S2RK49_9STRA5.870e-644.83Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig16402contigL-elsbetiae_contig16402:53..1746 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig16402.4355.1mRNA_L-elsbetiae_contig16402.4355.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig16402 53..1748 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig16402.4355.1 ID=prot_L-elsbetiae_contig16402.4355.1|Name=mRNA_L-elsbetiae_contig16402.4355.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=305bp
QANSTGTAAHSSRRRRRGGSTAAPAAATATARQQQPTSLLQHTSGGRTTT
TTGGVSGGGAGGRGGGGGGGGGGGRGGGNRKIWEEHVAPAPAAAAAAATS
AGRGQASELPKGESGRRKGGGGGGGGAGAGVRRSAVAPAAGNDFGGAARG
AVHPGMLESEFLAATGQASGGAEGGAVLSSLSLEEVPYDRDLRWCNTASD
SRPRPKMDPSGGVFGRVGTAITQDTGDYERLDRHYQELWKDREPRGGSSG
RGRNGGRLRRVRGPGGGRNVDHLPAGFSTIAAATERAGRGAGAAGAAGVA
GRERW
back to top