prot_L-elsbetiae_contig16382.4338.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig16382.4338.1
Unique Nameprot_L-elsbetiae_contig16382.4338.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length56
Homology
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BLAST of mRNA_L-elsbetiae_contig16382.4338.1 vs. uniprot
Match: A0A6H5KW24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW24_9PHAE)

HSP 1 Score: 104 bits (260), Expect = 7.570e-25
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 0 
Query:    1 QVSRSQLLQHAEQVMSMYTPSKAVLEFRFAGEKGLGAGVTASFYSAVAAELQRRSV 56
            QVSRSQLLQHAEQVMSMYTPSKAVLEFRFAGEKGLGAGVTASFYSAVAAELQRRSV
Sbjct: 3024 QVSRSQLLQHAEQVMSMYTPSKAVLEFRFAGEKGLGAGVTASFYSAVAAELQRRSV 3079
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BLAST of mRNA_L-elsbetiae_contig16382.4338.1 vs. uniprot
Match: D8LBS8_ECTSI (HECT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBS8_ECTSI)

HSP 1 Score: 103 bits (256), Expect = 2.630e-24
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0 
Query:    2 VSRSQLLQHAEQVMSMYTPSKAVLEFRFAGEKGLGAGVTASFYSAVAAELQRRSV 56
            VSRSQLLQHAEQVMSMYTPSKAVLEFRFAGEKGLGAGVTASFYSAVAAELQRRSV
Sbjct: 1426 VSRSQLLQHAEQVMSMYTPSKAVLEFRFAGEKGLGAGVTASFYSAVAAELQRRSV 1480
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BLAST of mRNA_L-elsbetiae_contig16382.4338.1 vs. uniprot
Match: A0A836CNJ7_9STRA (HECT domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNJ7_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 1.900e-11
Identity = 37/57 (64.91%), Postives = 43/57 (75.44%), Query Frame = 0 
Query:    1 QVSRSQLLQHAEQVMSMYTPSKA---VLEFRFAGEKGLGAGVTASFYSAVAAELQRR 54
            QVSR  LL+HA+Q+M  YT   +   VLEFRF GE+GLGAGVTASFYSAVAA +  R
Sbjct:  206 QVSRDHLLEHAQQIMLAYTTPTSLASVLEFRFQGERGLGAGVTASFYSAVAAAMHAR 262
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BLAST of mRNA_L-elsbetiae_contig16382.4338.1 vs. uniprot
Match: A0A2D4BHU9_PYTIN (HECT E3 ubiquitin ligase, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BHU9_PYTIN)

HSP 1 Score: 54.7 bits (130), Expect = 3.120e-7
Identity = 29/50 (58.00%), Postives = 36/50 (72.00%), Query Frame = 0 
Query:    2 VSRSQLLQHAEQVMSMYTPSKAVLEFRFAGEKGLGAGVTASFYSAVAAEL 51
            V R ++L  AE VM M++  KA+L+  FAGEKG G+GVTASFYSA A  L
Sbjct: 1163 VHRDKILSSAEAVMKMHSKRKAILDVVFAGEKGYGSGVTASFYSATAQAL 1212
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16382.4338.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KW24_9PHAE7.570e-25100.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LBS8_ECTSI2.630e-24100.00HECT domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A836CNJ7_9STRA1.900e-1164.91HECT domain-containing protein n=1 Tax=Tribonema m... [more]
A0A2D4BHU9_PYTIN3.120e-758.00HECT E3 ubiquitin ligase, putative n=1 Tax=Pythium... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR45670FAMILY NOT NAMEDcoord: 2..55
IPR035983HECT, E3 ligase catalytic domainSUPERFAMILY56204Hect, E3 ligase catalytic domaincoord: 2..54

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig16382contigL-elsbetiae_contig16382:1369..1536 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig16382.4338.1mRNA_L-elsbetiae_contig16382.4338.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig16382 1369..1536 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig16382.4338.1 ID=prot_L-elsbetiae_contig16382.4338.1|Name=mRNA_L-elsbetiae_contig16382.4338.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=56bp
QVSRSQLLQHAEQVMSMYTPSKAVLEFRFAGEKGLGAGVTASFYSAVAAE
LQRRSV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035983Hect_E3_ubiquitin_ligase