prot_L-elsbetiae_contig1638.4336.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1638.4336.1
Unique Nameprot_L-elsbetiae_contig1638.4336.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length201
Homology
BLAST of mRNA_L-elsbetiae_contig1638.4336.1 vs. uniprot
Match: A0A6H5JDE4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDE4_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 4.930e-17
Identity = 48/78 (61.54%), Postives = 53/78 (67.95%), Query Frame = 0
Query:    4 VQFNSGTWTDEEHQGFLRGLEVHGRGSWEAIGGFVSTRSPLQIEEHAQQHFAAVEPV---HPEEVPVAQPARSGEAHL 78
            V FN GTWTD EHQGFLRGLEV+G G+ +AIG FV +RSPLQIE +AQ H A VE V   H   V    PAR G A L
Sbjct:   10 VPFNCGTWTDVEHQGFLRGLEVYGYGNCDAIGIFVPSRSPLQIEAYAQWHLAEVEAVRHLHQVGVQGTSPARRGWALL 87          
BLAST of mRNA_L-elsbetiae_contig1638.4336.1 vs. uniprot
Match: D7G877_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G877_ECTSI)

HSP 1 Score: 80.1 bits (196), Expect = 2.190e-16
Identity = 37/59 (62.71%), Postives = 44/59 (74.58%), Query Frame = 0
Query:    3 RVQFNSGTWTDEEHQGFLRGLEVHGRGSWEAIGGFVSTRSPLQIEEHAQQHFAAVEPVH 61
            RV  NSGTWTDEEH+GFLRGLEV+G G+W A+  FV +RSP QIE +AQ + A  E  H
Sbjct:    2 RVPLNSGTWTDEEHKGFLRGLEVYGHGNWNAMAVFVLSRSPPQIEAYAQDYMAEKETAH 60          
BLAST of mRNA_L-elsbetiae_contig1638.4336.1 vs. uniprot
Match: A0A6H5K163_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K163_9PHAE)

HSP 1 Score: 80.1 bits (196), Expect = 5.840e-16
Identity = 38/57 (66.67%), Postives = 43/57 (75.44%), Query Frame = 0
Query:    4 VQFNSGTWTDEEHQGFLRGLEVHGRGSWEAIGGFVSTRSPLQIEEHAQQHFAAVEPV 60
            VQ N G WTDEEHQGFL GLEV+G G+W AI  FV TRSP QIE +A+Q+FA  E V
Sbjct:   16 VQLNGGRWTDEEHQGFLSGLEVYGHGNWNAIAVFVPTRSPPQIEAYARQYFALGEAV 72          
BLAST of mRNA_L-elsbetiae_contig1638.4336.1 vs. uniprot
Match: D7G878_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G878_ECTSI)

HSP 1 Score: 78.6 bits (192), Expect = 5.530e-15
Identity = 39/57 (68.42%), Postives = 45/57 (78.95%), Query Frame = 0
Query:    4 VQFNSGTWTDEEHQGFLRGLEVHGRGSWEAIGGFVSTRSPLQIEEHAQQHFAAVEPV 60
            V FN GTWTD EHQGFLRGLEV+G G+ +AIG FV +RSPLQIE +AQ +FA  E V
Sbjct:   15 VPFNCGTWTDVEHQGFLRGLEVYGYGNCDAIGIFVPSRSPLQIEAYAQWYFAEGEAV 71          
BLAST of mRNA_L-elsbetiae_contig1638.4336.1 vs. uniprot
Match: D7G876_ECTSI (MYB DNA binding protein/ transcription factor-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G876_ECTSI)

HSP 1 Score: 74.3 bits (181), Expect = 3.490e-14
Identity = 34/53 (64.15%), Postives = 41/53 (77.36%), Query Frame = 0
Query:    7 NSGTWTDEEHQGFLRGLEVHGRGSWEAIGGFVSTRSPLQIEEHAQQHFAAVEP 59
            + G WTDEEHQGFL GLEV+G G+W+AI  FV +RSP QIE +AQQ+ A V P
Sbjct:   22 SGGRWTDEEHQGFLHGLEVYGYGNWDAIAVFVPSRSPPQIEAYAQQYVAQVRP 74          
BLAST of mRNA_L-elsbetiae_contig1638.4336.1 vs. uniprot
Match: D7FPI5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPI5_ECTSI)

HSP 1 Score: 67.0 bits (162), Expect = 2.110e-11
Identity = 32/63 (50.79%), Postives = 43/63 (68.25%), Query Frame = 0
Query:    3 RVQFNSGTWTDEEHQGFLRGLEVHGRGSWEAIGGFVSTRSPLQIEEHAQQHFAAVEPVHPEEV 65
            R+   +  WT++EH GFL GLEV+G G+W+AI  FV +RS  QIE +AQQ+ A  E VH  +V
Sbjct:    5 RIPLTTEGWTEDEHNGFLHGLEVYGYGNWDAIAVFVPSRSSPQIEAYAQQYVAQGESVHSPQV 67          
BLAST of mRNA_L-elsbetiae_contig1638.4336.1 vs. uniprot
Match: D2V1P6_NAEGR (SANT domain-containing protein n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2V1P6_NAEGR)

HSP 1 Score: 65.1 bits (157), Expect = 7.430e-9
Identity = 29/53 (54.72%), Postives = 38/53 (71.70%), Query Frame = 0
Query:    2 TRVQFNSGTWTDEEHQGFLRGLEVHGRGSWEAIGGFVSTRSPLQIEEHAQQHF 54
            T+  +  G WT EEH  FL+GLE+HG+GSW+ I   V TRSP QI+ HAQ++F
Sbjct:  356 TKKPYKQG-WTKEEHILFLKGLELHGKGSWKEISAIVGTRSPTQIQSHAQKYF 407          
BLAST of mRNA_L-elsbetiae_contig1638.4336.1 vs. uniprot
Match: A0A1B6P6D9_SORBI (Uncharacterized protein n=1 Tax=Sorghum bicolor TaxID=4558 RepID=A0A1B6P6D9_SORBI)

HSP 1 Score: 62.4 bits (150), Expect = 4.910e-8
Identity = 29/45 (64.44%), Postives = 35/45 (77.78%), Query Frame = 0
Query:   11 WTDEEHQGFLRGLEVHGRGSWEAIGG-FVSTRSPLQIEEHAQQHF 54
            WT +EH+ FLRGLEVHGRGSW+ I   FV TR+P QI  HAQ++F
Sbjct:  137 WTQDEHKNFLRGLEVHGRGSWKNISRYFVPTRTPNQICSHAQKYF 181          
BLAST of mRNA_L-elsbetiae_contig1638.4336.1 vs. uniprot
Match: A0A2P6NH67_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NH67_9EUKA)

HSP 1 Score: 61.6 bits (148), Expect = 7.780e-8
Identity = 24/44 (54.55%), Postives = 32/44 (72.73%), Query Frame = 0
Query:   11 WTDEEHQGFLRGLEVHGRGSWEAIGGFVSTRSPLQIEEHAQQHF 54
            WT EEH  FL+GL +HGRG W+ I   V T++P QI+ HAQ++F
Sbjct:   89 WTKEEHAKFLQGLRIHGRGRWKEIASIVGTKTPTQIQSHAQKYF 132          
BLAST of mRNA_L-elsbetiae_contig1638.4336.1 vs. uniprot
Match: UPI001CFEF800 (uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001CFEF800)

HSP 1 Score: 62.0 bits (149), Expect = 8.510e-8
Identity = 27/53 (50.94%), Postives = 38/53 (71.70%), Query Frame = 0
Query:    2 TRVQFNSGTWTDEEHQGFLRGLEVHGRGSWEAIGGFVSTRSPLQIEEHAQQHF 54
            T+  +  G WT EEH  FL+GLE+HG+G+W+ I   V TR+P QI+ HAQ++F
Sbjct:  356 TKKPYKQG-WTKEEHILFLKGLELHGKGNWKEISNIVVTRTPTQIQSHAQKYF 407          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1638.4336.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JDE4_9PHAE4.930e-1761.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G877_ECTSI2.190e-1662.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K163_9PHAE5.840e-1666.67MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D7G878_ECTSI5.530e-1568.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G876_ECTSI3.490e-1464.15MYB DNA binding protein/ transcription factor-like... [more]
D7FPI5_ECTSI2.110e-1150.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D2V1P6_NAEGR7.430e-954.72SANT domain-containing protein n=1 Tax=Naegleria g... [more]
A0A1B6P6D9_SORBI4.910e-864.44Uncharacterized protein n=1 Tax=Sorghum bicolor Ta... [more]
A0A2P6NH67_9EUKA7.780e-854.55Uncharacterized protein n=1 Tax=Planoprotostelium ... [more]
UPI001CFEF8008.510e-850.94uncharacterized protein n=1 Tax=Naegleria lovanien... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 7..56
e-value: 5.3E-8
score: 42.6
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 9..53
e-value: 2.1E-9
score: 37.4
NoneNo IPR availableGENE3D1.10.10.60coord: 8..60
e-value: 1.6E-13
score: 52.6
NoneNo IPR availablePANTHERPTHR44191FAMILY NOT NAMEDcoord: 10..56
NoneNo IPR availablePANTHERPTHR44191:SF12coord: 10..56
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 3..58
score: 11.655
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 11..57

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1638contigL-elsbetiae_contig1638:18880..21865 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1638.4336.1mRNA_L-elsbetiae_contig1638.4336.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1638 18628..23239 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1638.4336.1 ID=prot_L-elsbetiae_contig1638.4336.1|Name=mRNA_L-elsbetiae_contig1638.4336.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=201bp
MTRVQFNSGTWTDEEHQGFLRGLEVHGRGSWEAIGGFVSTRSPLQIEEHA
QQHFAAVEPVHPEEVPVAQPARSGEAHLSLSATSSSPSPPLGNGGGGGGG
DAGSDAGSDRETPVVATGASGDVVPAGLVPVANDGASEQQQQQQQQQQTF
VHEEGHQAGEPIGSLMAHTVPYPDPLVWEEPALGAELRRYFGVVDYCGIL
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR017930Myb_dom
IPR009057Homeobox-like_sf