prot_L-elsbetiae_contig16359.4326.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig16359.4326.1
Unique Nameprot_L-elsbetiae_contig16359.4326.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length63
Homology
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BLAST of mRNA_L-elsbetiae_contig16359.4326.1 vs. uniprot
Match: A0A6H5KKJ6_9PHAE (SMK-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKJ6_9PHAE)

HSP 1 Score: 93.2 bits (230), Expect = 1.170e-20
Identity = 43/60 (71.67%), Postives = 48/60 (80.00%), Query Frame = 0 
Query:    1 VAFRGQENVGCLEIWEQICDVQGRFGNEYGGGRGRSGGEALVPLPDPKMDSLAAVRKSLR 60
            +A   QENVGCLEIW+QICDVQGRFGNEYG  R R GGE  VPLPDPKMD+L A+ + LR
Sbjct:  184 LALSFQENVGCLEIWDQICDVQGRFGNEYG--RPRGGGEVAVPLPDPKMDTLGAILELLR 241
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BLAST of mRNA_L-elsbetiae_contig16359.4326.1 vs. uniprot
Match: D7FI53_ECTSI (SMK-1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI53_ECTSI)

HSP 1 Score: 89.4 bits (220), Expect = 2.600e-19
Identity = 41/54 (75.93%), Postives = 44/54 (81.48%), Query Frame = 0 
Query:    1 VAFRGQENVGCLEIWEQICDVQGRFGNEYGGGRGRSGGEALVPLPDPKMDSLAA 54
            +A   QENVGCLEIW+QICDVQGRFGNEYG  R R GGE  VPLPDPKMD+L A
Sbjct:   97 LALSFQENVGCLEIWDQICDVQGRFGNEYG--RPRGGGEVAVPLPDPKMDTLGA 148
[Close]
BLAST of mRNA_L-elsbetiae_contig16359.4326.1 vs. uniprot
Match: A0A7S3YI92_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YI92_HETAK)

HSP 1 Score: 52.8 bits (125), Expect = 1.970e-6
Identity = 25/59 (42.37%), Postives = 38/59 (64.41%), Query Frame = 0 
Query:    1 VAFRGQENVGCLEIWEQICDVQGRFGNEYGGGRGRSGGEALVPLPDPKMDSLAAVRKSL 59
            +A   QEN GCLEIW ++CDVQG++ +E+         E+   LP+ KMDSL+ + ++L
Sbjct:   85 LALSFQENAGCLEIWNKVCDVQGKY-SEF------RPDESKYSLPECKMDSLSEIGEAL 136
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16359.4326.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KKJ6_9PHAE1.170e-2071.67SMK-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
D7FI53_ECTSI2.600e-1975.93SMK-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A7S3YI92_HETAK1.970e-642.37Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig16359contigL-elsbetiae_contig16359:804..992 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig16359.4326.1mRNA_L-elsbetiae_contig16359.4326.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig16359 804..992 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig16359.4326.1 ID=prot_L-elsbetiae_contig16359.4326.1|Name=mRNA_L-elsbetiae_contig16359.4326.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=63bp
VAFRGQENVGCLEIWEQICDVQGRFGNEYGGGRGRSGGEALVPLPDPKMD
SLAAVRKSLRQQ*
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