prot_L-elsbetiae_contig16354.4325.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig16354.4325.1
Unique Name	prot_L-elsbetiae_contig16354.4325.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	92

Homology

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BLAST of mRNA_L-elsbetiae_contig16354.4325.1 vs. uniprot
Match: A0A6H5KH41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH41_9PHAE)

HSP 1 Score: 182 bits (461), Expect = 2.220e-51
Identity = 86/90 (95.56%), Postives = 87/90 (96.67%), Query Frame = 0

Query:    1 RTAADDVVCGVLDLFVEAEWDGAWHGGCLALAELARRGLLLPERLPRACPLVRRALAYDVRRGAGGVGAHVRDAACYVCWAFARAYSPKV 90
            R  ADDVVC VLDLFVEAEWDGAWHGGCLALAELARRGLLLPERLPRACPLVRRALAYDVRRGAGGVGAHVRDAACYVCWAFARAYSP+V
Sbjct:  360 RELADDVVCSVLDLFVEAEWDGAWHGGCLALAELARRGLLLPERLPRACPLVRRALAYDVRRGAGGVGAHVRDAACYVCWAFARAYSPRV 449

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BLAST of mRNA_L-elsbetiae_contig16354.4325.1 vs. uniprot
Match: D8LNX3_ECTSI (Tubulin folding cofactor D n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNX3_ECTSI)

HSP 1 Score: 182 bits (461), Expect = 2.660e-51
Identity = 86/90 (95.56%), Postives = 87/90 (96.67%), Query Frame = 0

Query:    1 RTAADDVVCGVLDLFVEAEWDGAWHGGCLALAELARRGLLLPERLPRACPLVRRALAYDVRRGAGGVGAHVRDAACYVCWAFARAYSPKV 90
            R  ADDVVC VLDLFVEAEWDGAWHGGCLALAELARRGLLLPERLPRACPLVRRALAYDVRRGAGGVGAHVRDAACYVCWAFARAYSP+V
Sbjct:  470 RELADDVVCSVLDLFVEAEWDGAWHGGCLALAELARRGLLLPERLPRACPLVRRALAYDVRRGAGGVGAHVRDAACYVCWAFARAYSPRV 559

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BLAST of mRNA_L-elsbetiae_contig16354.4325.1 vs. uniprot
Match: A0A7S2SV11_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SV11_9STRA)

HSP 1 Score: 143 bits (360), Expect = 4.990e-39
Identity = 68/89 (76.40%), Postives = 76/89 (85.39%), Query Frame = 0

Query:    4 ADDVVCGVLDLFVEAEWDGAWHGGCLALAELARRGLLLPERLPRACPLVRRALAYDVRRGAGGVGAHVRDAACYVCWAFARAYSPKVKK 92
            ADDVV  VL+LF ++E DGAWHGGCLALAELARRGLLLP RLP A P+V +A+ YDVRRG+  VGAHVRDAACYVCWAFARAYSP V +
Sbjct:   14 ADDVVASVLELFSDSEGDGAWHGGCLALAELARRGLLLPFRLPEAVPVVAKAIQYDVRRGSNSVGAHVRDAACYVCWAFARAYSPAVMR 102

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BLAST of mRNA_L-elsbetiae_contig16354.4325.1 vs. uniprot
Match: A0A835ZJS0_9STRA (Tubulin folding cofactor D n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJS0_9STRA)

HSP 1 Score: 144 bits (362), Expect = 5.930e-38
Identity = 70/85 (82.35%), Postives = 75/85 (88.24%), Query Frame = 0

Query:    4 ADDVVCGVLDLFVEAEWDGAWHGGCLALAELARRGLLLPERLPRACPLVRRALAYDVRRGAGGVGAHVRDAACYVCWAFARAYSP 88
            AD+VV  VLDLF +AE DG WHGGCLALAELARRGLLLP+RLP A P+V RA+AYDVRRG  GVGAHVRDAACYVCWAFARAYSP
Sbjct:  437 ADEVVGSVLDLFSDAESDGGWHGGCLALAELARRGLLLPQRLPVAVPVVIRAMAYDVRRGTTGVGAHVRDAACYVCWAFARAYSP 521

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BLAST of mRNA_L-elsbetiae_contig16354.4325.1 vs. uniprot
Match: A0A7S1CFH1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CFH1_9STRA)

HSP 1 Score: 136 bits (343), Expect = 2.130e-35
Identity = 68/92 (73.91%), Postives = 72/92 (78.26%), Query Frame = 0

Query:    1 RTAADDVVCGVLDLFVEAEWDGAWHGGCLALAELARRGLLLPERLPRACPLVRRALAYDVRRGAGGVGAHVRDAACYVCWAFARAYSPKVKK 92
            R  A DVV  VL L  + E DGAWHGGCLALAELARRGLLLP  LP A P+V +ALAYDVRRGA  VG HVRDAACYVCWAFARAYSP V +
Sbjct:   58 RDFAGDVVGAVLQLLCDEEGDGAWHGGCLALAELARRGLLLPSLLPEAVPVVVKALAYDVRRGAHSVGTHVRDAACYVCWAFARAYSPSVMR 149

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BLAST of mRNA_L-elsbetiae_contig16354.4325.1 vs. uniprot
Match: UPI0018D85098 (tubulin-specific chaperone D-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D85098)

HSP 1 Score: 135 bits (340), Expect = 5.480e-35
Identity = 65/89 (73.03%), Postives = 72/89 (80.90%), Query Frame = 0

Query:    1 RTAADDVVCGVLDLFVEAEWDGAWHGGCLALAELARRGLLLPERLPRACPLVRRALAYDVRRGAGGVGAHVRDAACYVCWAFARAYSPK 89
            R  AD VV  VL+LF   EWDGAWHGGCLALAEL RRGLLLPERLP   P+V +ALAYD ++G+  VGAHVRDAACYVCWAFARAY P+
Sbjct:  401 RELADQVVESVLELFNLREWDGAWHGGCLALAELGRRGLLLPERLPVVVPVVLKALAYDEKKGSCSVGAHVRDAACYVCWAFARAYDPE 489

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BLAST of mRNA_L-elsbetiae_contig16354.4325.1 vs. uniprot
Match: A0A836BXK6_9CHLO (TFCD_C domain-containing protein n=2 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836BXK6_9CHLO)

HSP 1 Score: 134 bits (337), Expect = 1.400e-34
Identity = 66/90 (73.33%), Postives = 70/90 (77.78%), Query Frame = 0

Query:    1 RTAADDVVCGVLDLFVEAEWDGAWHGGCLALAELARRGLLLPERLPRACPLVRRALAYDVRRGAGGVGAHVRDAACYVCWAFARAYSPKV 90
            R   D+VV GVL LF   E D AWHGGCLALAELARRGLLLPERLP   PLVR AL YDVRRG   +GAHVRDAA YVCWAFARAY P++
Sbjct:  413 RELGDEVVAGVLGLFGPTESDAAWHGGCLALAELARRGLLLPERLPAIIPLVREALHYDVRRGPHSIGAHVRDAAAYVCWAFARAYEPQL 502

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BLAST of mRNA_L-elsbetiae_contig16354.4325.1 vs. uniprot
Match: UPI001455CF17 (tubulin-specific chaperone D-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI001455CF17)

HSP 1 Score: 132 bits (333), Expect = 4.820e-34
Identity = 64/89 (71.91%), Postives = 71/89 (79.78%), Query Frame = 0

Query:    1 RTAADDVVCGVLDLFVEAEWDGAWHGGCLALAELARRGLLLPERLPRACPLVRRALAYDVRRGAGGVGAHVRDAACYVCWAFARAYSPK 89
            R  AD+V   +L+LF   E DGAWHGGCLALAEL RRGLLLPERLP   P+V +ALAYD +RG+  VGAHVRDAACYVCWAFARAY PK
Sbjct:  402 RELADEVTGSMLELFSLRESDGAWHGGCLALAELGRRGLLLPERLPEVVPVVLKALAYDEKRGSYSVGAHVRDAACYVCWAFARAYDPK 490

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BLAST of mRNA_L-elsbetiae_contig16354.4325.1 vs. uniprot
Match: A0A8B7ZYW5_ACAPL (Tubulin-specific chaperone D n=2 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7ZYW5_ACAPL)

HSP 1 Score: 132 bits (333), Expect = 4.830e-34
Identity = 64/89 (71.91%), Postives = 71/89 (79.78%), Query Frame = 0

Query:    1 RTAADDVVCGVLDLFVEAEWDGAWHGGCLALAELARRGLLLPERLPRACPLVRRALAYDVRRGAGGVGAHVRDAACYVCWAFARAYSPK 89
            R  AD VV  VL+LF   E DGAWHGGCLALAEL RRGLLLPERLP   P+V +ALAYD ++G+  VGAHVRDAACYVCWAFARAY P+
Sbjct:  401 RELADQVVESVLELFCLGELDGAWHGGCLALAELGRRGLLLPERLPEVVPVVLKALAYDEKKGSCSVGAHVRDAACYVCWAFARAYDPQ 489

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BLAST of mRNA_L-elsbetiae_contig16354.4325.1 vs. uniprot
Match: A0A6P8HPE4_ACTTE (tubulin-specific chaperone D-like n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8HPE4_ACTTE)

HSP 1 Score: 132 bits (332), Expect = 5.110e-34
Identity = 62/89 (69.66%), Postives = 71/89 (79.78%), Query Frame = 0

Query:    1 RTAADDVVCGVLDLFVEAEWDGAWHGGCLALAELARRGLLLPERLPRACPLVRRALAYDVRRGAGGVGAHVRDAACYVCWAFARAYSPK 89
            +  ADDVV  VL+LF   E DGAWHGGCLALAEL RRGLLLP+RLP   P+V +ALAYD RRG+  VG+HVRD ACYVCW+FARAY P+
Sbjct:  456 KDLADDVVGSVLELFTPNETDGAWHGGCLALAELGRRGLLLPQRLPEVVPVVLKALAYDERRGSYSVGSHVRDGACYVCWSFARAYDPR 544

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig16354.4325.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig16354.4325.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KH41_9PHAE	2.220e-51	95.56	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LNX3_ECTSI	2.660e-51	95.56	Tubulin folding cofactor D n=1 Tax=Ectocarpus sili...	[more]
A0A7S2SV11_9STRA	4.990e-39	76.40	Hypothetical protein (Fragment) n=1 Tax=Rhizochrom...	[more]
A0A835ZJS0_9STRA	5.930e-38	82.35	Tubulin folding cofactor D n=1 Tax=Tribonema minus...	[more]
A0A7S1CFH1_9STRA	2.130e-35	73.91	Hypothetical protein (Fragment) n=1 Tax=Bicosoecid...	[more]
UPI0018D85098	5.480e-35	73.03	tubulin-specific chaperone D-like n=1 Tax=Patiria ...	[more]
A0A836BXK6_9CHLO	1.400e-34	73.33	TFCD_C domain-containing protein n=2 Tax=Edaphochl...	[more]
UPI001455CF17	4.820e-34	71.91	tubulin-specific chaperone D-like n=1 Tax=Asterias...	[more]
A0A8B7ZYW5_ACAPL	4.830e-34	71.91	Tubulin-specific chaperone D n=2 Tax=Acanthaster p...	[more]
A0A6P8HPE4_ACTTE	5.110e-34	69.66	tubulin-specific chaperone D-like n=1 Tax=Actinia ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 16..88

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig16354	contig	L-elsbetiae_contig16354:1286..2455 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig16354.4325.1	mRNA_L-elsbetiae_contig16354.4325.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig16354 1286..2455 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig16354.4325.1 ID=prot_L-elsbetiae_contig16354.4325.1|Name=mRNA_L-elsbetiae_contig16354.4325.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=92bp
RTAADDVVCGVLDLFVEAEWDGAWHGGCLALAELARRGLLLPERLPRACP
LVRRALAYDVRRGAGGVGAHVRDAACYVCWAFARAYSPKVKK

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR016024	ARM-type_fold