prot_L-elsbetiae_contig1634.4317.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1634.4317.1
Unique Nameprot_L-elsbetiae_contig1634.4317.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length156
Homology
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BLAST of mRNA_L-elsbetiae_contig1634.4317.1 vs. uniprot
Match: D8LF57_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF57_ECTSI)

HSP 1 Score: 199 bits (507), Expect = 6.610e-63
Identity = 104/161 (64.60%), Postives = 119/161 (73.91%), Query Frame = 0 
Query:    5 GYIALCCMVGAGAFIVPIPPPLQAYSPRSPRFNSRS--AV--GGESD----EVSVFDAGEAAVSWDDYKKQKPNEYKLDEVDEMQCWKTDECPVEDASKFTKAWQVHSAERNPTTETHFDSEGEWEEETK--WSKKWHEDVGEDDLHEEIASPPAKDGFGI 155
            G + L       AF    P P   +  R+ R  + +  AV  GG+ D    E+SVFDAGE AVSW+DYKKQKP+E+KLD VDEMQCWKTDECPVED  KFTKAW++HSAERNPT ETHFDSEGEWEEE+K  WSKKWHEDVGEDDLHE+  SP AKDG+GI
Sbjct:   13 GVVLLVLAASGEAFFTAAPAPA-VFKSRAYRITTTNVNAVRHGGQQDQQDPELSVFDAGETAVSWEDYKKQKPDEFKLDAVDEMQCWKTDECPVEDEKKFTKAWEIHSAERNPTMETHFDSEGEWEEESKGAWSKKWHEDVGEDDLHEDTVSPAAKDGYGI 172
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1634.4317.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LF57_ECTSI6.610e-6364.60Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..28
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..155
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1634contigL-elsbetiae_contig1634:11687..14994 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1634.4317.1mRNA_L-elsbetiae_contig1634.4317.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1634 10768..15094 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1634.4317.1 ID=prot_L-elsbetiae_contig1634.4317.1|Name=mRNA_L-elsbetiae_contig1634.4317.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=156bp
MKKTGYIALCCMVGAGAFIVPIPPPLQAYSPRSPRFNSRSAVGGESDEVS
VFDAGEAAVSWDDYKKQKPNEYKLDEVDEMQCWKTDECPVEDASKFTKAW
QVHSAERNPTTETHFDSEGEWEEETKWSKKWHEDVGEDDLHEEIASPPAK
DGFGI*
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