prot_L-elsbetiae_contig163.4303.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig163.4303.1
Unique Nameprot_L-elsbetiae_contig163.4303.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length564
Homology
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BLAST of mRNA_L-elsbetiae_contig163.4303.1 vs. uniprot
Match: D8LJB7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJB7_ECTSI)

HSP 1 Score: 529 bits (1363), Expect = 1.040e-180
Identity = 352/532 (66.17%), Postives = 408/532 (76.69%), Query Frame = 0 
Query:   40 LNLEASALSPATARTTGALVGSSQALFPRAPAASLTNNRSSKSSELQAPLPAV---EPAASTTTARGGETVALTFEELLARCTAMLGAPEGVQARESLRRVLKIWSEGGSMDECIQTSQRPQGSSR-RRSKQRPALPVEARARPRAGGTP---VAAAVVGGTGERPLSLAVHGSQVDSSVNRDRQLAIAEAAAARWEKRYNQQVSATERALLEKRNANISLREIERVLEKERAEAARXXXXXXXXXXXXXXTLRDVADAEGEREGGPKVALSETVEHSLHSMVVRERCERQRRQRLQASEEKLTAATLEIGELREALAAAEKNRSLQPVVVGLGEILRECLASLGLVRGAPEGEFHSLVSRLRDRAEKAARGFVSVEGLHAAAEGARALDTVRDLRVKLADALLDASRQRARRVSADARLKEKETGEMERAFGKEDLLKARQEVDATRARMAVADAEMKQLKQCLKEEQERSAAARRAAARNRAAPIADLRGIFDEGHRLVEEKMRIKAQQIQQEVSEMQQDLSLEARLREL 564
            L++EAS    AT  T G L   S +L PRAP  SL+N R S++SEL+A L A    EPAA   ++R G   +LTF+ELL  C AMLG P GV+ARESLRRVLK WSE G   +C   S+RP  ++R RRSKQRP+LP+EAR     GGT      AA    T      LAV G+Q+DSS N DR+LA+AEAAAARWEKRYNQQ SATE+ALLE RNA ISLRE+ERVL +ERA+AAR   XXXXXXXXXXX        + E+EGG   ALSE+V HSL SM VRERCE+Q RQRLQ S+ KL  A  EIGELR+A  AAEKNRSLQPVVV LGEIL+ECLAS+G+VRG P+GEFH++VS LRDRAEKAA GF+SVEGLHAAAEGARALD +RDLRV+L +ALLDASRQRARRVSADAR+KEKETGEMER FGK++LLKAR+E   TRAR+AVADAE+KQLK+ LKEEQERSAAA  AA R+R+APIAD+RGIFDEGHRLV+EKM++KAQQIQQE        S EARLRE+
Sbjct:    3 LSVEASPAFQATTET-GTLASVSPSLLPRAPPPSLSN-RMSRTSELRASLVAAAGAEPAARVASSRTGRKSSLTFDELLVGCIAMLGVPGGVRARESLRRVLKAWSEDGDRHDCDDGSRRPTEAARPRRSKQRPSLPLEAR-----GGTSNFTTTAAGHSATDRSSSLLAVRGNQMDSSANNDRRLAVAEAAAARWEKRYNQQASATEKALLETRNAKISLREVERVLGEERADAARAARXXXXXXXXXXXXXXXXXXXQDEKEGGLTSALSESVAHSLQSMAVRERCEKQLRQRLQLSQAKLAEAETEIGELRKAAKAAEKNRSLQPVVVSLGEILKECLASMGIVRGVPDGEFHAMVSVLRDRAEKAATGFLSVEGLHAAAEGARALDAIRDLRVQLQEALLDASRQRARRVSADARVKEKETGEMERTFGKDELLKARKETGETRARLAVADAEVKQLKKSLKEEQERSAAAW-AATRHRSAPIADVRGIFDEGHRLVQEKMKLKAQQIQQEXXXXXXXXS-EARLREV 525
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig163.4303.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LJB7_ECTSI1.040e-18066.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 246..282
NoneNo IPR availableCOILSCoilCoilcoord: 469..510
NoneNo IPR availableCOILSCoilCoilcoord: 534..554
NoneNo IPR availableCOILSCoilCoilcoord: 328..355

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig163contigL-elsbetiae_contig163:16917..24305 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig163.4303.1mRNA_L-elsbetiae_contig163.4303.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig163 16917..24305 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig163.4303.1 ID=prot_L-elsbetiae_contig163.4303.1|Name=mRNA_L-elsbetiae_contig163.4303.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=564bp
MDESNATATGGTRTTTRECTKNARSTVRSVSDLGTACYTLNLEASALSPA
TARTTGALVGSSQALFPRAPAASLTNNRSSKSSELQAPLPAVEPAASTTT
ARGGETVALTFEELLARCTAMLGAPEGVQARESLRRVLKIWSEGGSMDEC
IQTSQRPQGSSRRRSKQRPALPVEARARPRAGGTPVAAAVVGGTGERPLS
LAVHGSQVDSSVNRDRQLAIAEAAAARWEKRYNQQVSATERALLEKRNAN
ISLREIERVLEKERAEAARAAHEASVAAAEAAETLRDVADAEGEREGGPK
VALSETVEHSLHSMVVRERCERQRRQRLQASEEKLTAATLEIGELREALA
AAEKNRSLQPVVVGLGEILRECLASLGLVRGAPEGEFHSLVSRLRDRAEK
AARGFVSVEGLHAAAEGARALDTVRDLRVKLADALLDASRQRARRVSADA
RLKEKETGEMERAFGKEDLLKARQEVDATRARMAVADAEMKQLKQCLKEE
QERSAAARRAAARNRAAPIADLRGIFDEGHRLVEEKMRIKAQQIQQEVSE
MQQDLSLEARLREL
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