prot_L-elsbetiae_contig1626.4279.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1626.4279.1
Unique Nameprot_L-elsbetiae_contig1626.4279.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length344
Homology
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BLAST of mRNA_L-elsbetiae_contig1626.4279.1 vs. uniprot
Match: D8LPI8_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPI8_ECTSI)

HSP 1 Score: 282 bits (722), Expect = 1.400e-92
Identity = 136/172 (79.07%), Postives = 151/172 (87.79%), Query Frame = 0 
Query:  168 VARALSPVDFREEAIFDDLDVDGRPSQIHGKGTFSKKGASEGDVLLSVLIPSKAVEKGFAFRG-GGYDCNQHVMHKDGLGVMFIDPATRMRGNFGACREDFKLGVLRLLNHSDDPNIAVSTREAATPAWYEAVGEPFPRWYECRLVASRRIGVDEEMTIQYAVAPKGVKAAK 338
            +A AL+PVDFR E IF DLDV+GRPSQIHG+GTFSK GAS+ DVLLSV++PSKAVEKGFA    GGYDCNQHVMHKDGLGVMFIDP  RMRGN GAC+EDFKLGVLRLLNHSDDPNIA+STREAA P WYEA+GE F  WYEC LVA+R IGVDEEMTI+YA+APKG++ AK
Sbjct:    1 MAPALTPVDFRGEDIFHDLDVEGRPSQIHGRGTFSKNGASKNDVLLSVILPSKAVEKGFASNSDGGYDCNQHVMHKDGLGVMFIDPGARMRGNLGACKEDFKLGVLRLLNHSDDPNIAISTREAAIPDWYEALGEKFTTWYECTLVATRAIGVDEEMTIEYALAPKGIRLAK 172
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1626.4279.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LPI8_ECTSI1.400e-9279.07N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepI... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 126..153
NoneNo IPR availableGENE3D2.170.270.10coord: 186..334
e-value: 1.4E-8
score: 36.4
NoneNo IPR availableSUPERFAMILY82199SET domaincoord: 191..332
IPR001214SET domainPFAMPF00856SETcoord: 108..327
e-value: 5.2E-8
score: 33.5
IPR001214SET domainPROSITEPS50280SETcoord: 186..328
score: 9.393

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1626contigL-elsbetiae_contig1626:19890..23611 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1626.4279.1mRNA_L-elsbetiae_contig1626.4279.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1626 19840..23711 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1626.4279.1 ID=prot_L-elsbetiae_contig1626.4279.1|Name=mRNA_L-elsbetiae_contig1626.4279.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=344bp
MSPAIEYAEGVTPAVADFIMAQAGASISVDEVQKKLFDRVVVDGDLKSLP
APKEFDPRFWPGLLSVLQEITRSPSPATEDAGKARGLHKEVVELRKLHSK
RMSWRRWDAKKKAADQAERAKGESERDALKRDVALLEGRFREVEERKLQA
EIRRTPRRLCNEREEVAVARALSPVDFREEAIFDDLDVDGRPSQIHGKGT
FSKKGASEGDVLLSVLIPSKAVEKGFAFRGGGYDCNQHVMHKDGLGVMFI
DPATRMRGNFGACREDFKLGVLRLLNHSDDPNIAVSTREAATPAWYEAVG
EPFPRWYECRLVASRRIGVDEEMTIQYAVAPKGVKAAKRKRRK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001214SET_dom