prot_L-elsbetiae_contig16239.4267.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig16239.4267.1
Unique Nameprot_L-elsbetiae_contig16239.4267.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length293
Homology
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BLAST of mRNA_L-elsbetiae_contig16239.4267.1 vs. uniprot
Match: D8LQU0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQU0_ECTSI)

HSP 1 Score: 149 bits (377), Expect = 9.580e-38
Identity = 84/140 (60.00%), Postives = 96/140 (68.57%), Query Frame = 0 
Query:   53 HPPTYFPCNKGKSCLFEADAAHLSRALRLPGALTLMVASKLSKRQAAIHGSCPINLSTFSPDLELSRSLPRAVSSWGHYTHRVESKDPRGRTVATADLTVSLSCLGAAGALFQ--------------PNNSPAATASPQP 178
            HP  +F C+KGKSC+F A+ A LSRAL+   ALT +VASKLS RQAAIHGSC I+LSTF P+ ELS SLPRAVS WGH T  VESKD +G TVA A LTVSLSCLGA G+L                 N SP+A A P+P
Sbjct:  142 HPKPFF-CSKGKSCIFTANPADLSRALQTQSALTFLVASKLSLRQAAIHGSCAIDLSTFGPNAELSHSLPRAVSCWGHRTTCVESKDLKGATVARAGLTVSLSCLGATGSLIHLTPVRTGVASYRASGNGSPSAAAPPRP 280
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16239.4267.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQU0_ECTSI9.580e-3860.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig16239contigL-elsbetiae_contig16239:1273..3022 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig16239.4267.1mRNA_L-elsbetiae_contig16239.4267.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig16239 1273..3022 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig16239.4267.1 ID=prot_L-elsbetiae_contig16239.4267.1|Name=mRNA_L-elsbetiae_contig16239.4267.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=293bp
TRLFSDKTSALPSILLCLLDFEPLVFEGLQKEEGYTCSQDTNSNSNEDGQ
DGHPPTYFPCNKGKSCLFEADAAHLSRALRLPGALTLMVASKLSKRQAAI
HGSCPINLSTFSPDLELSRSLPRAVSSWGHYTHRVESKDPRGRTVATADL
TVSLSCLGAAGALFQPNNSPAATASPQPPRTLSTAAVAPPPPPCCTPETA
QNNPRPVQSPESGGPSGDGGRKGREKQPAAAAGKRGRCAAAEEEQADRTR
PSRGGGGRRFGRQEPGGGASWTCEFNPQDGSLAEVVTSTGTAL
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