prot_L-elsbetiae_contig1623.4262.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1623.4262.1
Unique Nameprot_L-elsbetiae_contig1623.4262.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length436
Homology
BLAST of mRNA_L-elsbetiae_contig1623.4262.1 vs. uniprot
Match: A0A6H5L879_9PHAE (WSC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L879_9PHAE)

HSP 1 Score: 256 bits (654), Expect = 2.030e-76
Identity = 148/393 (37.66%), Postives = 196/393 (49.87%), Query Frame = 0
Query:   59 QAESGFECGGA-GFPGVRSSEGTGKICCAEECGTCGGSGCAGFATEHNMTASHCCTTEIRDLGVMCSDTMEAPCIIAHLSTHDEPEPETQAVQLAD-----YELVRCSEMETADGGETAFFYTKQDENLMLSTCSDECAEQAALYFAVLEGDVCGCGDSEEFL-----SADDRPVGECDMACPGNAAEICGGRTSYVLYEIFAGEPGSSDDGESGTGSGSXXXXXXXGETXXXXXXXXXXXXXDLPTCSTGITGVESESGDVCCDYKCVTCGGDKCRGNGDCCEHTIQLKHGLCSDTGTAPCVYNE-ADIDTPAPVA---IPEVEPRETRYCSNGLPGVESDDGITCCLEACVGCS-EKDEECVGASACCAQFIKEQEIYCQDEGVEAGPCIM 435
            +A +G  C  A G  G+ S+ G   +CC  ECG CGG  C   A    +    CC ++I   GV CSD+  APCI+       + E ET + Q+ +     Y  + C ++      E  F  +    +L +  C + CA +++LYFA++EGDVC CGD E F+     S +++  G C+ ACPG+  E CGG  ++ LY I                                           LPTC+ GI GVE+ SGDVCC + C  CGGDKC G G CCEHTIQ + GLC DT  APCV+N  A   TP P     +P   P     C+  +PG+ESDDG  CC+E C  C  E  +EC G  ACC + I    + C DEGVE GPCI+
Sbjct:  121 KASAGNTCSNANGVEGISSANG--DVCCPSECGLCGGRDCTQAALAAGLDDGDCCVSDITKEGVKCSDSGAAPCIVY------DSEDETGSNQVREASTPVYITLGCGKI---GDYEDPFTVSSTVSDLTVEACYELCASESSLYFALVEGDVCSCGDQETFVQTFLDSYEEQTAGTCNTACPGSPDETCGGAQAFDLYRI-------------------------------------------LPTCTGGIIGVEAASGDVCCPFSCGECGGDKCVGEGGCCEHTIQSREGLCEDTNAAPCVFNVVAPPPTPVPAPTTPMPTRPPGPVSTCTGDIPGLESDDGTVCCMEHCASCRIESADECAGVPACCQEKILLTGLMCSDEGVEEGPCIL 459          
BLAST of mRNA_L-elsbetiae_contig1623.4262.1 vs. uniprot
Match: D7FJ60_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ60_ECTSI)

HSP 1 Score: 242 bits (618), Expect = 8.860e-72
Identity = 140/388 (36.08%), Postives = 185/388 (47.68%), Query Frame = 0
Query:   59 QAESGFECGGA-GFPGVRSSEGTGKICCAEECGTCGGSGCAGFATEHNMTASHCCTTEIRDLGVMCSDTMEAPCIIAHLSTHDEPEPETQAVQLADYELVRCSEMETADGGETAFFYTKQDENLMLSTCSDECAEQAALYFAVLEGDVCGCGDSEEFLSA-----DDRPVGECDMACPGNAAEICGGRTSYVLYEIFAGEPGSSDDGESGTGSGSXXXXXXXGETXXXXXXXXXXXXXDLPTCSTGITGVESESGDVCCDYKCVTCGGDKCRGNGDCCEHTIQLKHGLCSDTGTAPCVYNE-ADIDTPAPVA---IPEVEPRETRYCSNGLPGVESDDGITCCLEACVGCS-EKDEECVGASACCAQFIKEQEIYCQDEGVEAGPCIM 435
            Q  +G  C    G  G+  S G G +CC  EC  CGG  C   A    +    CC ++I   GV CSD+  APC+ A+ S  +   P  Q      Y  + C ++      E  F  +    +L    C + CA +++LYF ++EG+VC CGD E F+       D++    C  ACPG+  E CGG  ++ LY+I                                           LPTC+ GI GVE+ SGDVCC + C  CGGD+C G G CCEHTIQ +  LC  T  APCV+N  A   TP P     +P   P     C+  +PG+ESDDG  CC+E C  C  E  ++CVG  ACC + I    + C DEGVE GPCI+
Sbjct:  121 QESAGDTCSNTDGVEGI--SSGDGDVCCPSECVLCGGRDCTEAALAAGLADGDCCVSDITKEGVKCSDSGAAPCV-AYDSEDETGSPLVQEASTPVYIALGCGKI---GDYEDPFTVSSTVSDLTAEACYELCASESSLYFGLVEGNVCSCGDEETFVETFLDTYDEQTAATCSTACPGSPDETCGGAQAFDLYQI-------------------------------------------LPTCTGGIVGVEAASGDVCCPFSCGECGGDRCVGEGGCCEHTIQSREDLCEYTNAAPCVFNVVAPPPTPVPAPTTPMPTRPPGPVSTCTGDIPGLESDDGTVCCMEHCSSCRIESADQCVGVPACCQEKILLTGVKCSDEGVEEGPCIL 459          
BLAST of mRNA_L-elsbetiae_contig1623.4262.1 vs. uniprot
Match: D7FJ68_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ68_ECTSI)

HSP 1 Score: 117 bits (294), Expect = 1.690e-24
Identity = 133/399 (33.33%), Postives = 170/399 (42.61%), Query Frame = 0
Query:   70 GFPGVRSSEGTGKICCAEECGTCGGSGCAGFATEHNMTASHCCTTEIRDLGVMCSDTMEAPCIIAHLSTHDEPEPETQAVQLADYELVRCSEMETADGGETAFFYTKQDENLMLSTCSDECAE-QAALYFAVLEGDVCGCGDSEEF---LSADDRPVGECDMACPGNAAEICGGRTSYVLYEIFAGEPGSSDDGESGTGSGSXXXXXXXGETXXXXXXXXXXXXXDLPTCSTGITGVESESGDVCCDYKCVTCGGDKCR-------GNGDCCEHTIQLKHGLCSDTGTAPCVYNEADIDTPAPVAIPEVEPRE------------------TRYCSNGLPGVESDDGITCCLEACVGCSEKDEE----CVGASACCAQFIKEQEIYCQDEGVEAGPCIM 435
            G PG++S    G  CC  ECG CGGS CA +     + A +CC + I + G +CS  +EAPC++    +   P P T                                      TCS+     Q+     + E   CG  D +EF   L AD+  V   D+   G    I      Y+     A  P +           + XXXXXX   XXXXXXXXXXXXX  PTCSTGI G+ES  G VCC   C  CGG  C        G   CC   I      CS+TG APCV  +  + TPAPVA P                        T  CSNG+PG++S  G++CCL  C  C   D +     +GA  CC   I+E    C  + +EA PC++
Sbjct: 1168 GIPGIQS----GVSCCLAECGECGGSDCAEYGD--GLGADNCCQSNIEEYGELCSIKLEAPCVVD--DSAPAPSPVTMPTAXXXXXXXXXX---XXXXXXXXXXXXXXXXXXXTDTCSNGIPGIQSDNACCLAECGACGGSDCDEFGGGLGADNCCVS--DIVEHGEPCSIALEAPCYIDDSAPAPSPVAMP---------TAXXXXXXXXXXXXXXXXXXXXXXTEPTCSTGIPGIESSDGAVCCPTGCTMCGGSGCSTVGMPDYGPESCCSSDILSTGASCSETGEAPCVLADVVL-TPAPVAEPTXXXXXXXXXXXXXXXXXXXXXXXTDVCSNGIPGIQS--GVSCCLADCGECGGSDCDEFGGGLGADNCCESDIEEYGELCSIK-LEA-PCVV 1539          
BLAST of mRNA_L-elsbetiae_contig1623.4262.1 vs. uniprot
Match: A0A6H5JG29_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG29_9PHAE)

HSP 1 Score: 84.3 bits (207), Expect = 1.460e-13
Identity = 108/413 (26.15%), Postives = 149/413 (36.08%), Query Frame = 0
Query:   70 GFPGVRSSEGTGKICCAEECGTCGGSGCAGFATEHNMTASHCCTTEIRDLGVMCSDTMEAPCII-AHLSTHDEPEPETQAVQLADYELVRCSEMETADGGETAFFYTKQDENLMLSTCSDECAE-QAALYFAVLEGDVCGCGDSEEF---LSADDRPVGECDMACPGNAAEICGGRTSYVLYEIFAGEPGSSDDGESGTGSGSXXXXXXXGETXXXXXXXXXXXXXDLPTCSTGITGVESESGDVCCDYKCVTCGGDKCR------GNGDCCEHTIQLKHGLCSDTGTAPCVYNEADIDTPAPVAIPEVEPRE--------------------------------TRYCSNGLPGVESDDGITCCLEACVGC--SEKDE--ECVGASACCAQFIKEQEIYCQDEGVEAGPCIM 435
            G PG+RS    G  CC  ECG CGGSGC  F     + A +CC   I + G +CS T+EAPC++   L     P P    V L+++ L     +         F  + +  +L    CS+     Q+     + E   CG  D +EF   L AD+     C ++      E+C    S  L                                             + P    G++         CC  +C  CGG  C       G  +CCE  I+    LCS    APCV  +  +  P+PVA+P                                      T  CSNG+PG+++D+   CCL  C  C  S  DE    +GA  CC   I E    C    +EA PC +
Sbjct:  814 GIPGIRS----GNACCLAECGACGGSGCDEFGG--GLGADNCCEGNIEEHGELCSITLEAPCVVDGRLVADTVPCPSCLMVCLSEHGLTLPPSL---------FRISSRYSSLPPDMCSNGIPGIQSGSACCLAECGACGGLDCDEFGGGLGADN-----CCVSDIVEHGELC----SIAL---------------------------------------------EAPCYIDGVS---------CCLTECGECGGSGCAEYGGGLGADNCCESNIEEYGELCSIKLEAPCVV-DGTVPAPSPVAMPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDVCSNGIPGIQTDNA--CCLAECGACGGSGCDEFGGGLGADNCCVSDIVEYGELCSI-ALEA-PCYI 1143          
BLAST of mRNA_L-elsbetiae_contig1623.4262.1 vs. uniprot
Match: A0A6H5JJ37_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ37_9PHAE)

HSP 1 Score: 74.3 bits (181), Expect = 2.050e-10
Identity = 55/174 (31.61%), Postives = 71/174 (40.80%), Query Frame = 0
Query:  291 DLPTCSTGITGVESESGDVCCDYKCVTCGGDKCR-------GNGDCCEHTIQLKHGLCSDTGTAPCVYNEADIDTPAPVAIPEVEPRETRY-----------------CSNGLPGVESDDGITCCLEAC-----VGCSEKDEECVGASACCAQFIKEQEIYCQDEGVEAGPCIM 435
            ++  CSTGI G+ES  G VCC   C  CGG  C        G   CC+  +      CS +  APCV +    + PA    PE                         CSNG+PG++S  G +CCL  C      GC+E     +G   CCA  I+E    C      A PC +
Sbjct:  340 EVIVCSTGIPGIESSDGAVCCPINCTQCGGAGCATVGLPEYGAESCCQSDVLSAGVSCSVSEEAPCVLDAPATEMPAMAPTPEXXXXXXXXXXXXXXXXXXXXXXGDVCSNGIPGIQS--GDSCCLAECGACGGSGCAEFGGG-LGEDNCCAVRIEEYGELCSV--ALAAPCYV 508          
BLAST of mRNA_L-elsbetiae_contig1623.4262.1 vs. uniprot
Match: D7FRE8_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRE8_ECTSI)

HSP 1 Score: 70.1 bits (170), Expect = 4.810e-9
Identity = 60/200 (30.00%), Postives = 75/200 (37.50%), Query Frame = 0
Query:  291 DLPTCSTGITGVESESGDVCCDYKCVTCGGDKCR-------GNGDCCEHTIQLKHGLCSDTGTAPCVYNEA-----------------------DIDTPAPVAIPEVE--------------------PRETRYCSNGLPGVESDDGITCC---LEAC--VGCSEKDEECVGASACCAQFIKEQEIYCQDEGVEAGPCIM 435
            ++  CSTGI G+ES  G VCC   C  CGG+ C        G   CCE  +Q     CS +  APCV ++                           TP P A P  E                          CSNG PG++S  G +CC    EAC   GC+E     +G   CCA  I+E    C      A PC +
Sbjct:  408 EVIVCSTGIPGIESSDGTVCCPINCTQCGGEGCSTVGLPEYGAESCCELDVQSAGVSCSVSEEAPCVLDDVLSPTETPXXXXXXXXXXXXXXXXXXXTPEPTAAPATEMPAMAXXXXXXXXXXXXXXXXXXXDVCSNGFPGIQS--GDSCCHAECEACGGFGCAEFGGG-LGEDNCCAVRIEEYGELCST--ALAAPCYV 602          
BLAST of mRNA_L-elsbetiae_contig1623.4262.1 vs. uniprot
Match: A0A3M7RA80_BRAPC (Transmembrane receptor n=1 Tax=Brachionus plicatilis TaxID=10195 RepID=A0A3M7RA80_BRAPC)

HSP 1 Score: 56.6 bits (135), Expect = 6.460e-5
Identity = 38/102 (37.25%), Postives = 47/102 (46.08%), Query Frame = 0
Query:  154 YELVRCSEMETADGGETAFFYTKQDENL------MLSTCSDECAEQAALYFAVLEGDVCGCGDSEEFLSADDRPVGECDMACPGNAAEICGGRTSYV-LYEI 248
            Y L   SE  T        FYT    N        LS C   C ++ A +FA+  G  C C +   F S  D  +  CD+ CPGNA+EICGG    + LYEI
Sbjct:  255 YRLKGGSEFSTPSASFKGCFYTDSAFNSNYLGRNTLSLCLKYCIKKNAKFFAISNGFECFCENENNFGSQVDTRL--CDIKCPGNASEICGGYFGLMSLYEI 354          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1623.4262.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5L879_9PHAE2.030e-7637.66WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FJ60_ECTSI8.860e-7236.08WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FJ68_ECTSI1.690e-2433.33WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JG29_9PHAE1.460e-1326.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JJ37_9PHAE2.050e-1031.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRE8_ECTSI4.810e-930.00EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A3M7RA80_BRAPC6.460e-537.25Transmembrane receptor n=1 Tax=Brachionus plicatil... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002889Carbohydrate-binding WSCSMARTSM00321SLG_2coord: 153..249
e-value: 2.1E-5
score: 34.0
IPR002889Carbohydrate-binding WSCPFAMPF01822WSCcoord: 170..239
e-value: 1.6E-9
score: 37.8
IPR002889Carbohydrate-binding WSCPROSITEPS51212WSCcoord: 153..249
score: 9.732
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..40
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 21..32
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 41..435
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 33..40
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..20
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..32
score: 0.585
NoneNo IPR availableTMHMMTMhelixcoord: 21..40

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1623contigL-elsbetiae_contig1623:17704..23182 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1623.4262.1mRNA_L-elsbetiae_contig1623.4262.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1623 17350..24147 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1623.4262.1 ID=prot_L-elsbetiae_contig1623.4262.1|Name=mRNA_L-elsbetiae_contig1623.4262.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=436bp
MAYNMAVPGGKTLRTNMMTRLILLGMVPLCATGKIQGVLGREEVDGRLFL
RKESGRNLQAESGFECGGAGFPGVRSSEGTGKICCAEECGTCGGSGCAGF
ATEHNMTASHCCTTEIRDLGVMCSDTMEAPCIIAHLSTHDEPEPETQAVQ
LADYELVRCSEMETADGGETAFFYTKQDENLMLSTCSDECAEQAALYFAV
LEGDVCGCGDSEEFLSADDRPVGECDMACPGNAAEICGGRTSYVLYEIFA
GEPGSSDDGESGTGSGSASGSASAGETGDDGSDGESGGDGDLPTCSTGIT
GVESESGDVCCDYKCVTCGGDKCRGNGDCCEHTIQLKHGLCSDTGTAPCV
YNEADIDTPAPVAIPEVEPRETRYCSNGLPGVESDDGITCCLEACVGCSE
KDEECVGASACCAQFIKEQEIYCQDEGVEAGPCIM*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002889WSC_carb-bd