prot_L-elsbetiae_contig162.4253.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig162.4253.1
Unique Nameprot_L-elsbetiae_contig162.4253.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length280
Homology
BLAST of mRNA_L-elsbetiae_contig162.4253.1 vs. uniprot
Match: A0A6H5JIV0_9PHAE (Thioredoxin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JIV0_9PHAE)

HSP 1 Score: 380 bits (977), Expect = 1.040e-130
Identity = 211/277 (76.17%), Postives = 229/277 (82.67%), Query Frame = 0
Query:    9 ALAVVMATCMTPTGL-AFLPPPA---ALTRSRASVT-AVGSGQGAAAPAAR-LASRLPAAREDCKSCMEAELLEEERKRADMDGEDGGKRVAARRAALEEANRREKARNLKIAFGSFMSAVGLFFFQHSVIAPAQANPVILLRAMETSSAPLATALTNGKPTVVDFYADWCENCKVMAPSMREIEEQFKNQINFVVVDGTAEKNYDLVDAFRVDGIPHLAMVNADGEVETAIIGAVPKDVVVDDIKALLAGRPLPYKGFDMFEGEDHNIKGQVQIDG 279
            ALAVV+  C  PT + +FLPPPA   AL R+++S + A G    A++ AA    SRL AAREDCKSCMEAELLE             G   A RR ALEE NRREKARN KIAFGSF+SAVGLFF QH+ IAPAQANPV+LLRAMET+SAPLATALTNGKPTVVDFYADWCENCK MAPSMREIEEQFKNQINFVVVDG+AEKNYDLVDAFRVDGIPHLAMVN  GEVETAI+GAVPKDVVVDDIKALLAGRPLP+KGFDMFEGEDHNIKGQ++IDG
Sbjct:    6 ALAVVLGLCRGPTAVVSFLPPPATALALARAKSSASEAAGPSIAASSVAAGGRGSRLAAAREDCKSCMEAELLEXXXXXXXXXXXXEG--AATRRGALEEFNRREKARNTKIAFGSFLSAVGLFFCQHAAIAPAQANPVVLLRAMETTSAPLATALTNGKPTVVDFYADWCENCKAMAPSMREIEEQFKNQINFVVVDGSAEKNYDLVDAFRVDGIPHLAMVNGKGEVETAIVGAVPKDVVVDDIKALLAGRPLPFKGFDMFEGEDHNIKGQIEIDG 280          
BLAST of mRNA_L-elsbetiae_contig162.4253.1 vs. uniprot
Match: A0A7S3XXL6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXL6_HETAK)

HSP 1 Score: 181 bits (458), Expect = 1.280e-53
Identity = 86/160 (53.75%), Postives = 115/160 (71.88%), Query Frame = 0
Query:  112 LKIAFGSFMSAVGLFFFQHSVIAPAQANPVILLRAMETSSAPLATALTNGKPTVVDFYADWCENCKVMAPSMREIEEQFKNQINFVVVDGTAEKNYDLVDAFRVDGIPHLAMVNADGEVETAIIGAVPKDVVVDDIKALLAGRPLPYKGFDMFEGEDHNI 271
            L+ A  S ++AVGLF +Q +        P+ LLRAM   S PLA  L NGKPTVVDFYADWC NCK MAP+MR +E+++  ++NF+ VDG   +N DLV  FRVDGIPHLA++ AD EVETA+IG VPK ++ +++ ALLA +PLP+ G+D F G+ H++
Sbjct:    9 LRAAAASALAAVGLFCYQRAH----PPEPLQLLRAMARESPPLAVCLANGKPTVVDFYADWCSNCKAMAPTMRALEKEYAGRVNFLAVDGADPRNADLVGRFRVDGIPHLALITADHEVETALIGMVPKPILEEEMDALLAAKPLPWVGYDAFRGKSHSM 164          
BLAST of mRNA_L-elsbetiae_contig162.4253.1 vs. uniprot
Match: I2CQS5_NANGC (Thioredoxin domain-containing protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQS5_NANGC)

HSP 1 Score: 174 bits (440), Expect = 2.690e-49
Identity = 89/182 (48.90%), Postives = 128/182 (70.33%), Query Frame = 0
Query:   93 VAARRAALEEANRREKARNLKIAFGSFMSAVGLFFFQHSVIAPAQANPVILLRAMETSSAPLATALTNGKPTVVDFYADWCENCKVMAPSMREIEEQFKNQINFVVVDGTA--EKNYDLVDAFRVDGIPHLAMVNADGEVETAIIGAVPKDVVVDDIKALLAGRPLPYKGFDMFEGEDHNIK 272
             ++R A L+E   +EK   +  A  S +SAV +FF+QH+   P +A  + LLR M+  S  + T   NG+PTVVDFYA+WCENCK MAP +R +E ++K+++NFVVV+G    E +  LV+ FRVDGIPHLA++  +GEV+TA+IG VP+ V+  DI +L++G+ LPY+G+D FE EDH +K
Sbjct:  115 ASSRMARLQEELTKEKRNKVVTAVASVLSAVAVFFYQHT--HPVEA--ITLLRQMQAESPNIRTVSGNGRPTVVDFYAEWCENCKEMAPVLRAVEGKYKDKVNFVVVNGDDRNEASSVLVERFRVDGIPHLALMTKEGEVKTALIGKVPRKVLEADIDSLISGQVLPYEGYDAFEDEDHFVK 292          
BLAST of mRNA_L-elsbetiae_contig162.4253.1 vs. uniprot
Match: A0A7S2MHY4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MHY4_9STRA)

HSP 1 Score: 170 bits (431), Expect = 1.730e-48
Identity = 89/173 (51.45%), Postives = 113/173 (65.32%), Query Frame = 0
Query:   99 ALEEANRREKARNLKIAFGSFMSAVGLFFFQHSVIAPAQANPVILLRAMETSSAPLATALTNGKPTVVDFYADWCENCKVMAPSMREIEEQFKNQINFVVVDGTAEKNYDLVDAFRVDGIPHLAMVNADGEVETAIIGAVPKDVVVDDIKALLAGRPLPYKGFDMFEGEDHNI 271
            A  EA   ++ RN+ IA GS     G F +  S   P QA  V +L+ + ++S PLA  L NGKPTVVDFYADWC NC  MAP M+ +E +FK ++NFV +DG    N   +D F+VDGIPHLA V ADGEV+TA+IG VPKDV+  D+KALL  + LPY G+D F G   N+
Sbjct:   75 AFAEAYESKRRRNMLIAVGSAAIGAGAFGWDRS--KPVQA--VGILKELASASPPLAEVLRNGKPTVVDFYADWCTNCLEMAPRMQLLERKFKGKVNFVAIDGDNRANERWIDDFKVDGIPHLAFVGADGEVQTALIGLVPKDVLEADMKALLEQKELPYLGYDAFRGRSRNV 243          
BLAST of mRNA_L-elsbetiae_contig162.4253.1 vs. uniprot
Match: A0A7S2V5P4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5P4_9STRA)

HSP 1 Score: 167 bits (423), Expect = 4.600e-48
Identity = 84/166 (50.60%), Postives = 112/166 (67.47%), Query Frame = 0
Query:  106 REKARNLKIAFGSFMSAVGLFFFQHSVIAPAQANPVILLRAMETSSAPLATALTNGKPTVVDFYADWCENCKVMAPSMREIEEQFKNQINFVVVDGTAEKNYDLVDAFRVDGIPHLAMVNADGEVETAIIGAVPKDVVVDDIKALLAGRPLPYKGFDMFEGEDHNI 271
            +E+  NL IA  S ++AV LF  Q     P   + + LLRAME  S PL    TNGKPTVVDFYADWC  CK MAPSMR +E++F  ++NFV V+G   KN DLV  F+VDGIPH+A ++ +G VETA +G VPKDV+ +++ AL   + LPY+G+D F+G   ++
Sbjct:   24 KERKNNLLIACSSVLAAVCLFATQR-FFPP---DSLSLLRAMEAESTPLIAVQTNGKPTVVDFYADWCGYCKTMAPSMRTVEKEFAGRVNFVTVNGADPKNADLVYKFKVDGIPHIAFMDGEGYVETAFVGLVPKDVLEEEVDALAKHKALPYEGYDAFQGRPRSV 185          
BLAST of mRNA_L-elsbetiae_contig162.4253.1 vs. uniprot
Match: A0A0G4EGV6_VITBC (Thioredoxin domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EGV6_VITBC)

HSP 1 Score: 167 bits (423), Expect = 7.040e-48
Identity = 87/179 (48.60%), Postives = 122/179 (68.16%), Query Frame = 0
Query:   92 RVAARRAALEEANRREKARNLKIAFGSFMSAVGLFFFQHSVIAPAQANPVILLRAMETSSAPL-ATALTNGKPTVVDFYADWCENCKVMAPSMREIEEQFKNQINFVVVDGTAE--KNYDLVDAFRVDGIPHLAMVNADGEVETAIIGAVPKDVVVDDIKALLAGRPLPYKGFDMFEGE 267
            R   R AA+E  N  E+  N+++A GS +    L+  Q   + P +A+P+++LR ME  S P+ A   TNG+PTV+DFYA WCENCK MAPSMR IE+++  ++NFV VDG+     +  LV  FRVD IPH+A+V+A GE+ TA+IG +PK+V+  D  ALL+ RPLPY G+D F+G+
Sbjct:   18 REREREAAVEALNV-ERRENMRVALGSGLGGALLYGGQR--LNPLRADPLVILREMERDSPPVDAQLFTNGRPTVIDFYAPWCENCKTMAPSMRTIEKEYSGRVNFVTVDGSRSDTSSQRLVQRFRVDAIPHIALVSARGEILTALIGLIPKEVLKADFDALLSDRPLPYIGYDAFDGD 193          
BLAST of mRNA_L-elsbetiae_contig162.4253.1 vs. uniprot
Match: A0A7S2ST54_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2ST54_9STRA)

HSP 1 Score: 167 bits (424), Expect = 1.030e-46
Identity = 83/194 (42.78%), Postives = 123/194 (63.40%), Query Frame = 0
Query:   83 DMDGEDGGKRVAARRAALEEANRREKARNLKIAFGSFMSAVGLFFFQHSVIAPAQANPVILLRAMETSSAPLATALTNGKPTVVDFYADWCENCKVMAPSMREIEEQFKNQINFVVVDGTAEKNYDLVDAFRVDGIPHLAMVNADGEVETAIIGAVPKDVVVDDIKALLAGRPLPYKGFDMFEGEDHNIKGQVQ 276
            +M  E+  +R+A R   L +  RR    NL  A GS ++ VG F+ + S       + V +L AME +S PLA  L NGKPT++DFYADWCENCK MAP M ++E ++  ++NFV ++G +  N D VD FRVDGIPH A V+  G+++T++IG +P D++   + ALL   PLPY+G+D F G+  ++   ++
Sbjct:   82 EMLAEESERRIAERVNKLADTKRR----NLFTAIGSALTGVGAFWRKRSQ----PTDSVAILHAMERNSPPLAQCLENGKPTIIDFYADWCENCKAMAPRMAQLESRYGTRVNFVTINGDSRANDDWVDLFRVDGIPHYAFVDQGGDIQTSLIGLIPADIMEKQLAALLRQEPLPYQGYDPFVGKPRHVMDYIR 267          
BLAST of mRNA_L-elsbetiae_contig162.4253.1 vs. uniprot
Match: A0A5J4YW86_PORPP (Thiol:disulfide interchange protein TxlA-like n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YW86_PORPP)

HSP 1 Score: 154 bits (389), Expect = 8.350e-43
Identity = 78/188 (41.49%), Postives = 114/188 (60.64%), Query Frame = 0
Query:   90 GKRVAARRAALEEANRREKARNLKIAFGSFMSA---VGLFFFQHSVIAPAQANPVILLRAMETSSAPLATALTNGKPTVVDFYADWCENCKVMAPSMREIEEQFKNQINFVVVDGTAEKNYDLVDAFRVDGIPHLAMVNADGEV-ETAIIGAVPKDVVVDDIKALLAGRPLPYKGFDMFEGEDHNIKG 273
            GK V + RAA     +  +A+  ++  G  +SA   VGL F  H V+  +Q +P +++  +E  + P+  AL+NGKPTV++FYADWC +CKVMAP + ++   F   +NFVVV+G A +N DLV  FRVDGIPH++ +     + +T  IG VP DV+   I AL A  PLPY+G +++  E     G
Sbjct:   12 GKNVDSTRAAFAAKVKASEAKEQRMQRGKILSALISVGLGFVIHFVLTHSQLSPTVIMHELEKKNPPIEVALSNGKPTVIEFYADWCTDCKVMAPKLSKLHATFSPTVNFVVVNGDAPENQDLVSQFRVDGIPHISFIYGGKRIPDTTFIGLVPADVMTQQIDALRARAPLPYQGLELYSDEFEEAYG 199          
BLAST of mRNA_L-elsbetiae_contig162.4253.1 vs. uniprot
Match: A0A0G4GQ67_9ALVE (Thioredoxin domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GQ67_9ALVE)

HSP 1 Score: 147 bits (370), Expect = 6.610e-39
Identity = 76/172 (44.19%), Postives = 114/172 (66.28%), Query Frame = 0
Query:  103 ANRREKARNLKIAFGSFMSAVGLFFFQHSVIAPAQANPVILLRAMETSSAPLATAL-TNGKPTVVDFYADWCENCKVMAPSMREIEEQFKNQINFVVVDGTAEKNYDLVDAFRVDGIPHLAMVNADGEVETAIIGAVPKDVVVDDIKALLAGRPLPYKGFDMFE--GEDHNI 271
            A+  E A N  +A  S +     +FFQ     P++ +P+++L+ +E +S  + T L +NGKPTV++FYA WCENCKVMAP M  +E+ ++ +INFV VDG   +N DLV + RVD IPHLAMV+  G+ +TA+ G +P+ V+  D  AL+ G  LPY G+D+F+  G+ H++
Sbjct:   74 ASSEETAGNKAVAIVSALFGFVFYFFQLVRGVPSE-DPLVILKRLEMNSPVVDTRLVSNGKPTVMEFYAPWCENCKVMAPLMASVEKSYEGRINFVTVDGGKPENADLVRSLRVDAIPHLAMVDRSGKFQTALTGLIPEKVLRFDFDALIKGDDLPYVGYDVFDQDGDSHSM 244          
BLAST of mRNA_L-elsbetiae_contig162.4253.1 vs. uniprot
Match: A0A7S1CTK7_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S1CTK7_9STRA)

HSP 1 Score: 143 bits (361), Expect = 1.210e-38
Identity = 82/191 (42.93%), Postives = 117/191 (61.26%), Query Frame = 0
Query:  102 EANRREKARNLKIAFGSFMSAVGLFFFQ--HSVIAPAQANPVILLRAMETSSAPLATALTNGKPTVVDFYADWCENCKVMAPSMREIEEQFKNQINFVVVDGTAEKNYDLVDAFRVDGIPHLAMVNADGEVETAIIGAVPKDVVVDDIKALLAGRP-----------LPYKGFDMF-EGEDHNIKGQVQID 278
            E  ++ K RN+ IA  SF  A+  F +Q  H V A      V +L +ME  SAPL +   NGKPTV+DF+A WC NCKV AP+++ +EEQ+ + +NF++V+G   KN+ L+  F VD IPHLA+++ +G+VETA+IG + ++V+  DI ALL  R            LPYK +D F + E  NI  Q  +D
Sbjct:    2 EIIKKNKLRNVIIAVSSFAFAIANFVWQLAHPVTA------VSILVSMENKSAPLTSIGNNGKPTVIDFWAPWCSNCKVAAPTLQAVEEQYGDSVNFIMVNGDDGKNWPLIQLFGVDAIPHLALLSDEGDVETALIGPMSRNVLRADIDALLTKRENCEAAPVCHEELPYKMYDAFSKRESRNINFQRAMD 186          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig162.4253.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JIV0_9PHAE1.040e-13076.17Thioredoxin domain-containing protein n=2 Tax=Ecto... [more]
A0A7S3XXL6_HETAK1.280e-5353.75Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
I2CQS5_NANGC2.690e-4948.90Thioredoxin domain-containing protein n=1 Tax=Nann... [more]
A0A7S2MHY4_9STRA1.730e-4851.45Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2V5P4_9STRA4.600e-4850.60Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A0G4EGV6_VITBC7.040e-4848.60Thioredoxin domain-containing protein n=1 Tax=Vitr... [more]
A0A7S2ST54_9STRA1.030e-4642.78Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A5J4YW86_PORPP8.350e-4341.49Thiol:disulfide interchange protein TxlA-like n=1 ... [more]
A0A0G4GQ67_9ALVE6.610e-3944.19Thioredoxin domain-containing protein n=1 Tax=Chro... [more]
A0A7S1CTK7_9STRA1.210e-3842.93Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 158..248
e-value: 1.0E-17
score: 64.0
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 133..252
score: 15.262
NoneNo IPR availableGENE3D3.40.30.10coord: 145..252
e-value: 3.3E-24
score: 87.0
NoneNo IPR availablePANTHERPTHR47353FAMILY NOT NAMEDcoord: 75..258
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 114..133
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 27..113
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..26
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 134..279
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.647
NoneNo IPR availableTMHMMTMhelixcoord: 114..136
NoneNo IPR availableTMHMMTMhelixcoord: 10..32
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 149..252

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig162contigL-elsbetiae_contig162:6376..13836 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig162.4253.1mRNA_L-elsbetiae_contig162.4253.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig162 6321..15532 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig162.4253.1 ID=prot_L-elsbetiae_contig162.4253.1|Name=mRNA_L-elsbetiae_contig162.4253.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=280bp
MKAPHVHAALAVVMATCMTPTGLAFLPPPAALTRSRASVTAVGSGQGAAA
PAARLASRLPAAREDCKSCMEAELLEEERKRADMDGEDGGKRVAARRAAL
EEANRREKARNLKIAFGSFMSAVGLFFFQHSVIAPAQANPVILLRAMETS
SAPLATALTNGKPTVVDFYADWCENCKVMAPSMREIEEQFKNQINFVVVD
GTAEKNYDLVDAFRVDGIPHLAMVNADGEVETAIIGAVPKDVVVDDIKAL
LAGRPLPYKGFDMFEGEDHNIKGQVQIDG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013766Thioredoxin_domain
IPR036249Thioredoxin-like_sf