prot_L-elsbetiae_contig16170.4241.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig16170.4241.1
Unique Nameprot_L-elsbetiae_contig16170.4241.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length102
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig16170.4241.1 vs. uniprot
Match: D7FLF9_ECTSI (Flap endonuclease 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLF9_ECTSI)

HSP 1 Score: 202 bits (514), Expect = 3.210e-61
Identity = 99/101 (98.02%), Postives = 100/101 (99.01%), Query Frame = 0 
Query:    1 MGIQGLTKLLSDEAPNCMKEVDLDSLTGRKVAVDASMAMYQFLIAVRSGGEGQSQMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYIFDGKPPQLKGGEV 101
            MGI GLTKLLSDEAPNCMKEVDLDSLTGRKVAVDASMAMYQFLIAVRSGGEGQSQMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYIFDGKPPQLKGGE+
Sbjct:    1 MGIHGLTKLLSDEAPNCMKEVDLDSLTGRKVAVDASMAMYQFLIAVRSGGEGQSQMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYIFDGKPPQLKGGEL 101
[Close]
BLAST of mRNA_L-elsbetiae_contig16170.4241.1 vs. uniprot
Match: A0A835Z748_9STRA (Flap endonuclease 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z748_9STRA)

HSP 1 Score: 169 bits (429), Expect = 1.220e-48
Identity = 81/102 (79.41%), Postives = 93/102 (91.18%), Query Frame = 0 
Query:    1 MGIQGLTKLLSDEAPNCMKEVDLDSLTGRKVAVDASMAMYQFLIAVRSGGEG-QSQMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYIFDGKPPQLKGGEV 101
            MGIQGLTKLL+DE PNC+KE DL+SLTGRK+A+DASMAMYQFLIAVRSG EG  + MLTNEAGEVTSHIQGMFNRTI++L+ G+KP Y+FDGKPP LKGGE+
Sbjct:    1 MGIQGLTKLLNDECPNCIKEYDLNSLTGRKIAIDASMAMYQFLIAVRSGSEGVAATMLTNEAGEVTSHIQGMFNRTIKLLTSGLKPVYVFDGKPPTLKGGEL 102
[Close]
BLAST of mRNA_L-elsbetiae_contig16170.4241.1 vs. uniprot
Match: A0A7R9UCR1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UCR1_9STRA)

HSP 1 Score: 159 bits (403), Expect = 4.480e-46
Identity = 74/102 (72.55%), Postives = 90/102 (88.24%), Query Frame = 0 
Query:    1 MGIQGLTKLLSDEAPNCMKEVDLDSLTGRKVAVDASMAMYQFLIAVRSGGEG-QSQMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYIFDGKPPQLKGGEV 101
            MGI+GLTKLL+DEAP C+KE +L S TGRKVA+DASMA+YQF+IA+RSG EG  +Q+LTNE GE+TSHIQG+FNRTIRML+ G+KP Y+FDGKPP LK GE+
Sbjct:    1 MGIKGLTKLLNDEAPGCIKEAELSSYTGRKVAIDASMALYQFIIAIRSGSEGFAAQVLTNEQGEITSHIQGIFNRTIRMLTNGIKPVYVFDGKPPTLKSGEL 102
[Close]
BLAST of mRNA_L-elsbetiae_contig16170.4241.1 vs. uniprot
Match: A0A3R7CXE2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7CXE2_9STRA)

HSP 1 Score: 155 bits (391), Expect = 6.750e-45
Identity = 71/103 (68.93%), Postives = 90/103 (87.38%), Query Frame = 0 
Query:    1 MGIQGLTKLLSDEAPNCMKEVDLDSLTGRKVAVDASMAMYQFLIAVRSGGE--GQSQMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYIFDGKPPQLKGGEV 101
            MGI+GL KLL+DEAP C+KE+ + +L+GR VA+DASMA+YQFL+AVRS GE  G +QMLTN+AG+VTSHIQGMFNRTIR++  G+KP Y+FDGKPP +KGGE+
Sbjct:    1 MGIKGLMKLLTDEAPGCVKELQMSALSGRSVAIDASMALYQFLVAVRSNGEHGGAAQMLTNDAGDVTSHIQGMFNRTIRLMENGLKPVYVFDGKPPVMKGGEL 103
[Close]
BLAST of mRNA_L-elsbetiae_contig16170.4241.1 vs. uniprot
Match: A0A7R9W9K6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W9K6_9STRA)

HSP 1 Score: 149 bits (377), Expect = 2.040e-44
Identity = 71/102 (69.61%), Postives = 85/102 (83.33%), Query Frame = 0 
Query:    1 MGIQGLTKLLSDEAPNCMKEVDLDSLTGRKVAVDASMAMYQFLIAVRSGGEGQSQ-MLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYIFDGKPPQLKGGEV 101
            MGI+GL KLLSDEAP C++EV L SL GRKVA+DASMA+YQFLIAVRSGG   +  MLTN  GE TSHIQGMFNRTIR +++G++P ++FDGKPPQ K GE+
Sbjct:    1 MGIKGLAKLLSDEAPECIREVPLSSLQGRKVAIDASMAIYQFLIAVRSGGPNSAAAMLTNADGETTSHIQGMFNRTIRFMTEGIRPAFVFDGKPPQFKSGEL 102
[Close]
BLAST of mRNA_L-elsbetiae_contig16170.4241.1 vs. uniprot
Match: A0A397ET37_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397ET37_9STRA)

HSP 1 Score: 155 bits (391), Expect = 5.330e-44
Identity = 71/103 (68.93%), Postives = 90/103 (87.38%), Query Frame = 0 
Query:    1 MGIQGLTKLLSDEAPNCMKEVDLDSLTGRKVAVDASMAMYQFLIAVRSGGE--GQSQMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYIFDGKPPQLKGGEV 101
            MGI+GL KLL+DEAP C+KE+ + +L+GR VA+DASMA+YQFL+AVRS GE  G +QMLTN+AG+VTSHIQGMFNRTIR++  G+KP Y+FDGKPP +KGGE+
Sbjct:    1 MGIKGLMKLLTDEAPGCVKELQMSALSGRSVAIDASMALYQFLVAVRSNGEHGGAAQMLTNDAGDVTSHIQGMFNRTIRLMENGLKPVYVFDGKPPVMKGGEL 103
[Close]
BLAST of mRNA_L-elsbetiae_contig16170.4241.1 vs. uniprot
Match: A0A7S3HJ83_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HJ83_9STRA)

HSP 1 Score: 151 bits (381), Expect = 8.460e-44
Identity = 71/104 (68.27%), Postives = 89/104 (85.58%), Query Frame = 0 
Query:    1 MGIQGLTKLLSDEAPNCMKEVDLDSLTGRKVAVDASMAMYQFLIAVRS---GGEGQSQMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYIFDGKPPQLKGGEV 101
            MGI GL+KLL +E P  +KE +L++ TGRK+A+DASMAMYQFL+AVRS   GG GQ+ ML N+AGEVTSHIQGMFNRTIR+++ GV+P Y+FDGKPPQ+KGGE+
Sbjct:    6 MGIHGLSKLLQEECPAAIKEHELENFTGRKIAIDASMAMYQFLVAVRSAGPGGGGQAAMLMNDAGEVTSHIQGMFNRTIRIMTGGVRPVYVFDGKPPQMKGGEL 109
[Close]
BLAST of mRNA_L-elsbetiae_contig16170.4241.1 vs. uniprot
Match: W4FTR5_9STRA (Flap endonuclease 1 n=2 Tax=Aphanomyces TaxID=100860 RepID=W4FTR5_9STRA)

HSP 1 Score: 155 bits (391), Expect = 1.010e-43
Identity = 71/103 (68.93%), Postives = 90/103 (87.38%), Query Frame = 0 
Query:    1 MGIQGLTKLLSDEAPNCMKEVDLDSLTGRKVAVDASMAMYQFLIAVRSGGE--GQSQMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYIFDGKPPQLKGGEV 101
            MGI+GL KLL+DEAP C+KE+ + +L+GR VA+DASMA+YQFL+AVRS GE  G +QMLTN+AG+VTSHIQGMFNRTIR++  G+KP Y+FDGKPP +KGGE+
Sbjct:    1 MGIKGLMKLLTDEAPGCVKELQMSALSGRSVAIDASMALYQFLVAVRSNGEHGGAAQMLTNDAGDVTSHIQGMFNRTIRLMENGLKPVYVFDGKPPVMKGGEL 103
[Close]
BLAST of mRNA_L-elsbetiae_contig16170.4241.1 vs. uniprot
Match: A0A6G0WCI0_9STRA (Flap endonuclease 1 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WCI0_9STRA)

HSP 1 Score: 155 bits (391), Expect = 1.100e-43
Identity = 72/103 (69.90%), Postives = 89/103 (86.41%), Query Frame = 0 
Query:    1 MGIQGLTKLLSDEAPNCMKEVDLDSLTGRKVAVDASMAMYQFLIAVRSGGE--GQSQMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYIFDGKPPQLKGGEV 101
            MGI+GL KLL+DEAP C+KE+ + +L+GR VA+DASMA+YQFL+AVRS GE  G +QMLTNEAGEVTSHIQGMFNRTIR++  G+KP Y+FDGKPP +K GE+
Sbjct:    1 MGIKGLMKLLTDEAPGCVKELQMSALSGRSVAIDASMALYQFLVAVRSNGEHGGAAQMLTNEAGEVTSHIQGMFNRTIRLMENGLKPVYVFDGKPPVMKSGEL 103
[Close]
BLAST of mRNA_L-elsbetiae_contig16170.4241.1 vs. uniprot
Match: A0A1V9YW30_9STRA (Flap endonuclease 1 n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9YW30_9STRA)

HSP 1 Score: 154 bits (389), Expect = 2.180e-43
Identity = 73/103 (70.87%), Postives = 88/103 (85.44%), Query Frame = 0 
Query:    1 MGIQGLTKLLSDEAPNCMKEVDLDSLTGRKVAVDASMAMYQFLIAVRSGGEG--QSQMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYIFDGKPPQLKGGEV 101
            MGI+GL KLL+DEAP C+KE+ +  L+GR VA+DASMA+YQFLIAVRS G+G   +QMLTNEAGEVTSHIQGMFNRTIR++  GVKP Y+FDGKPP +K GE+
Sbjct:    1 MGIKGLMKLLTDEAPTCVKELQMAQLSGRSVAIDASMALYQFLIAVRSNGDGGGTAQMLTNEAGEVTSHIQGMFNRTIRLMENGVKPVYVFDGKPPVMKSGEL 103
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16170.4241.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLF9_ECTSI3.210e-6198.02Flap endonuclease 1 n=2 Tax=Ectocarpus TaxID=2879 ... [more]
A0A835Z748_9STRA1.220e-4879.41Flap endonuclease 1 n=1 Tax=Tribonema minus TaxID=... [more]
A0A7R9UCR1_9STRA4.480e-4672.55Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A3R7CXE2_9STRA6.750e-4568.93Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A7R9W9K6_9STRA2.040e-4469.61Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
A0A397ET37_9STRA5.330e-4468.93Uncharacterized protein n=4 Tax=Aphanomyces astaci... [more]
A0A7S3HJ83_9STRA8.460e-4468.27Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
W4FTR5_9STRA1.010e-4368.93Flap endonuclease 1 n=2 Tax=Aphanomyces TaxID=1008... [more]
A0A6G0WCI0_9STRA1.100e-4369.90Flap endonuclease 1 n=1 Tax=Aphanomyces euteiches ... [more]
A0A1V9YW30_9STRA2.180e-4370.87Flap endonuclease 1 n=4 Tax=Saprolegniaceae TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006084XPG/Rad2 endonucleasePRINTSPR00853XPGRADSUPERcoord: 85..101
score: 38.75
coord: 28..42
score: 49.79
IPR006084XPG/Rad2 endonucleasePANTHERPTHR11081FLAP ENDONUCLEASE FAMILY MEMBERcoord: 1..101
IPR006085XPG N-terminalSMARTSM00485xpgn3coord: 1..101
e-value: 3.6E-34
score: 129.5
IPR006085XPG N-terminalPFAMPF00752XPG_Ncoord: 1..100
e-value: 7.5E-26
score: 90.6
NoneNo IPR availableGENE3D3.40.50.1010coord: 1..101
e-value: 4.2E-34
score: 120.2
NoneNo IPR availablePANTHERPTHR11081:SF58FLAP ENDONUCLEASE 1coord: 1..101
IPR019974XPG conserved sitePROSITEPS00841XPG_1coord: 83..97
IPR029060PIN-like domain superfamilySUPERFAMILY88723PIN domain-likecoord: 2..100

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig16170contigL-elsbetiae_contig16170:463..1108 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig16170.4241.1mRNA_L-elsbetiae_contig16170.4241.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig16170 463..1108 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig16170.4241.1 ID=prot_L-elsbetiae_contig16170.4241.1|Name=mRNA_L-elsbetiae_contig16170.4241.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=102bp
MGIQGLTKLLSDEAPNCMKEVDLDSLTGRKVAVDASMAMYQFLIAVRSGG
EGQSQMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYIFDGKPPQLKGGE
V*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006084XPG/Rad2
IPR006085XPG_DNA_repair_N
IPR019974XPG_CS
IPR029060PIN-like_dom_sf