prot_L-elsbetiae_contig1616.4233.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1616.4233.1
Unique Nameprot_L-elsbetiae_contig1616.4233.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length156
Homology
BLAST of mRNA_L-elsbetiae_contig1616.4233.1 vs. uniprot
Match: D7FL45_ECTSI (Plastoquinol--plastocyanin reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FL45_ECTSI)

HSP 1 Score: 275 bits (702), Expect = 7.870e-92
Identity = 137/154 (88.96%), Postives = 141/154 (91.56%), Query Frame = 0
Query:    1 GPLGVNVLSLAVPYIAFFVPXXXXXXXXXVTAKDAIGNEVTTESWLATHTAGSRELAEGIKGDATYLVVKEDKTIHDYGIVAVCTHLGCVVPWNKAEKTFMCPCHGSQYDQTGKVIRGPAPLSLALSHVEEVDGKVIFKQWSETDFRNGEKPWW 154
            G +GVNVL LAVPYIAFFVPXXXXXXXX VTAKDAIGNEVT ESWLATH  GSRELAEGIKGDATYLVV EDK + DYGIVAVCTHLGCVVPWNKAE  FMCPCHGSQYDQTGKVIRGPAPLSLALSHVEEVDGKVIFK+W ETDFR G+KPWW
Sbjct:   71 GSIGVNVLGLAVPYIAFFVPXXXXXXXXGVTAKDAIGNEVTVESWLATHGVGSRELAEGIKGDATYLVVTEDKKVQDYGIVAVCTHLGCVVPWNKAENKFMCPCHGSQYDQTGKVIRGPAPLSLALSHVEEVDGKVIFKEWKETDFRTGDKPWW 224          
BLAST of mRNA_L-elsbetiae_contig1616.4233.1 vs. uniprot
Match: A0A835YPA4_9STRA (Plastoquinol--plastocyanin reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPA4_9STRA)

HSP 1 Score: 234 bits (598), Expect = 4.900e-76
Identity = 107/154 (69.48%), Postives = 120/154 (77.92%), Query Frame = 0
Query:    1 GPLGVNVLSLAVPYIAFFVPXXXXXXXXXVTAKDAIGNEVTTESWLATHTAGSRELAEGIKGDATYLVVKEDKTIHDYGIVAVCTHLGCVVPWNKAEKTFMCPCHGSQYDQTGKVIRGPAPLSLALSHVEEVDGKVIFKQWSETDFRNGEKPWW 154
            G  GV VL LAVPYIAFFVP         V A+DA+G +VT E WL TH  GSREL EGIKGDATYL VK+DKTI D+GIVAVCTHLGCVVPW +AE  F+CPCHGSQY+  GKV+RGPAPLSLALSH++   GKV+FK W+ETDFR GE PWW
Sbjct:   68 GSAGVVVLGLAVPYIAFFVPKSAGNAGGGVIARDAVGQDVTVEGWLGTHLPGSRELVEGIKGDATYLTVKQDKTIQDFGIVAVCTHLGCVVPWVQAENKFICPCHGSQYNADGKVVRGPAPLSLALSHIDTESGKVVFKPWTETDFRTGEAPWW 221          
BLAST of mRNA_L-elsbetiae_contig1616.4233.1 vs. uniprot
Match: W7TXJ0_9STRA (Plastoquinol--plastocyanin reductase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TXJ0_9STRA)

HSP 1 Score: 234 bits (596), Expect = 1.610e-75
Identity = 103/154 (66.88%), Postives = 123/154 (79.87%), Query Frame = 0
Query:    1 GPLGVNVLSLAVPYIAFFVPXXXXXXXXXVTAKDAIGNEVTTESWLATHTAGSRELAEGIKGDATYLVVKEDKTIHDYGIVAVCTHLGCVVPWNKAEKTFMCPCHGSQYDQTGKVIRGPAPLSLALSHVEEVDGKVIFKQWSETDFRNGEKPWW 154
            G +G+NV  LAVPYIAFFVP         + AKDA+G++VT + WL+TH AG R L +G+KGDATYL+VKEDKTI +YG+ AVCTHLGCVVPWNKAE  F+CPCHGSQYD+TGKV+RGPAPLSLAL+HV+E DGKV+   W+ETDFR    PWW
Sbjct:   83 GSVGLNVAGLAVPYIAFFVPRTGGGAGGGLAAKDALGDDVTVQGWLSTHQAGDRSLVQGLKGDATYLIVKEDKTIENYGLNAVCTHLGCVVPWNKAESKFICPCHGSQYDKTGKVVRGPAPLSLALAHVKESDGKVLLTPWTETDFRTDTAPWW 236          
BLAST of mRNA_L-elsbetiae_contig1616.4233.1 vs. uniprot
Match: A0A836CBH8_9STRA (Plastoquinol--plastocyanin reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBH8_9STRA)

HSP 1 Score: 232 bits (592), Expect = 4.000e-75
Identity = 105/154 (68.18%), Postives = 120/154 (77.92%), Query Frame = 0
Query:    1 GPLGVNVLSLAVPYIAFFVPXXXXXXXXXVTAKDAIGNEVTTESWLATHTAGSRELAEGIKGDATYLVVKEDKTIHDYGIVAVCTHLGCVVPWNKAEKTFMCPCHGSQYDQTGKVIRGPAPLSLALSHVEEVDGKVIFKQWSETDFRNGEKPWW 154
            G  GV VL LA+PYI+FFVP         V A+DA+G +VT E W+ATH  GSREL EGIKGDATYL VK+DKTI D+GIVAVCTHLGCVVPW +AE  F+CPCHGSQY+  GKV+RGPAPLSLALSH+E   G V+FK W+ETDFR GE PWW
Sbjct:   68 GSAGVVVLGLAIPYISFFVPKSAGGAGGGVIARDAVGQDVTVEGWVATHLPGSRELVEGIKGDATYLTVKQDKTIQDFGIVAVCTHLGCVVPWVQAENKFICPCHGSQYNMDGKVVRGPAPLSLALSHIETDTGNVVFKPWTETDFRTGEAPWW 221          
BLAST of mRNA_L-elsbetiae_contig1616.4233.1 vs. uniprot
Match: A0A7S1U2M5_9STRA (Plastoquinol--plastocyanin reductase n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U2M5_9STRA)

HSP 1 Score: 226 bits (577), Expect = 8.620e-72
Identity = 99/152 (65.13%), Postives = 119/152 (78.29%), Query Frame = 0
Query:    3 LGVNVLSLAVPYIAFFVPXXXXXXXXXVTAKDAIGNEVTTESWLATHTAGSRELAEGIKGDATYLVVKEDKTIHDYGIVAVCTHLGCVVPWNKAEKTFMCPCHGSQYDQTGKVIRGPAPLSLALSHVEEVDGKVIFKQWSETDFRNGEKPWW 154
            +GV  L +AVPYI+FFVP           AKDA+GN+VT   WL TH AG+REL +G+KGDATYL+V +DKT+ +YG+ AVCTHLGCVVPWN A+  FMCPCHGSQY++ GKV+RGPAPLSLAL+HVE  DGKV+F  W+ETDFR GE PWW
Sbjct:  147 VGVAGLGMAVPYISFFVPAGSGGGGSGTIAKDALGNDVTESGWLGTHNAGARELVQGLKGDATYLIVNDDKTLENYGLSAVCTHLGCVVPWNAAQGKFMCPCHGSQYNKEGKVVRGPAPLSLALAHVENKDGKVVFTPWTETDFRTGEAPWW 298          
BLAST of mRNA_L-elsbetiae_contig1616.4233.1 vs. uniprot
Match: A0A835ZDT9_9STRA (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDT9_9STRA)

HSP 1 Score: 214 bits (546), Expect = 2.410e-68
Identity = 100/156 (64.10%), Postives = 116/156 (74.36%), Query Frame = 0
Query:    4 GVNVLSLAVPYIAFFVPXXXXXXXXX-VTAKDAIGNEVTTESWLATHTAGSRELAEGIKGDATYLVVKED----KTIHDYGIVAVCTHLGCVVPWNKAEKTFMCPCHGSQYDQTGKVIRGPAPLSLALSHVEEVDGKVIFKQWSETDFRNGEKPWW 154
            GV VL LA+PY+A FVP          V A+DA+G EVT+E WLATH  GSREL EG+KGDATYL+V +D    K I D GIVAVCTH+GCVVPWN AE  F+CPCH SQYD  G+V+RGPAPLSLALSHV+   GKV+ + W+ETDFR GE PWW
Sbjct:   52 GVTVLGLAIPYVALFVPKHAEGGRSGSVVARDALGQEVTSEGWLATHLPGSRELVEGMKGDATYLIVDKDELHGKAIRDLGIVAVCTHMGCVVPWNAAENKFICPCHASQYDANGRVVRGPAPLSLALSHVDTGSGKVLLRPWTETDFRTGEAPWW 207          
BLAST of mRNA_L-elsbetiae_contig1616.4233.1 vs. uniprot
Match: A0A2D5MSC7_9BACT (Cytochrome b6-f complex iron-sulfur subunit n=1 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A2D5MSC7_9BACT)

HSP 1 Score: 213 bits (541), Expect = 8.270e-68
Identity = 94/154 (61.04%), Postives = 115/154 (74.68%), Query Frame = 0
Query:    1 GPLGVNVLSLAVPYIAFFVPXXXXXXXXXVTAKDAIGNEVTTESWLATHTAGSRELAEGIKGDATYLVVKEDKTIHDYGIVAVCTHLGCVVPWNKAEKTFMCPCHGSQYDQTGKVIRGPAPLSLALSHVEEVDGKVIFKQWSETDFRNGEKPWW 154
            G L  +V  LA+PY+ FF+P         + A    G+ +T ESWL+TH +GSREL +G+KGDATYLVV EDK I DYGI AVCTHLGCVVPWNK+   FMCPCHGSQYD++GKV+RGPAPLSLAL+H+ + +G + F QW+ETDFR G  PWW
Sbjct:   37 GGLVPSVGGLAIPYVLFFIPRTSGKSEAGIPALTKSGDTITYESWLSTHASGSRELVQGLKGDATYLVVDEDKKIRDYGINAVCTHLGCVVPWNKSANKFMCPCHGSQYDESGKVVRGPAPLSLALAHITDTNGVLTFSQWTETDFRTGLNPWW 190          
BLAST of mRNA_L-elsbetiae_contig1616.4233.1 vs. uniprot
Match: A0A2K1KX88_PHYPA (Plastoquinol--plastocyanin reductase n=4 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1KX88_PHYPA)

HSP 1 Score: 211 bits (538), Expect = 8.820e-67
Identity = 94/155 (60.65%), Postives = 115/155 (74.19%), Query Frame = 0
Query:    1 GPLGVNVLSLAVPYIAFFVPXXXXXXXXXVTAKDAIGNEVTTESWLATHTAGSRELAEGIKGDATYLVVKEDKTIHDYGIVAVCTHLGCVVPWNKAEKTFMCPCHGSQYDQTGKVIRGPAPLSLALSHVEEVDGKVIFKQWSETDFRNGEKPWWT 155
            G + +    L  PY+ F VP         VTAKDA+GN++T+  WL TH AG R LA+G+KGD TYLVV+ D T+  YG+ AVCTHLGCVVP+NKAE  FMCPCHGSQY+  GKV+RGPAPLSLAL+HV+ VD KV+F  W+ETDFR GE+PWW+
Sbjct:   78 GAVSLPTAGLLGPYLYFLVPPSSGGGGLGVTAKDALGNDITSSGWLKTHPAGDRTLAQGLKGDPTYLVVENDGTLAPYGVNAVCTHLGCVVPFNKAENKFMCPCHGSQYNNQGKVVRGPAPLSLALAHVDVVDDKVVFSPWTETDFRTGEQPWWS 232          
BLAST of mRNA_L-elsbetiae_contig1616.4233.1 vs. uniprot
Match: F0YEX1_AURAN (Uncharacterized protein petC n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YEX1_AURAN)

HSP 1 Score: 209 bits (531), Expect = 1.300e-66
Identity = 98/146 (67.12%), Postives = 114/146 (78.08%), Query Frame = 0
Query:    9 SLAVPYIAFFVPXXXXXXXXXVTAKDAIGNEVTTESWLATHTAGSRELAEGIKGDATYLVVKEDKTIHDYGIVAVCTHLGCVVPWNKAEKTFMCPCHGSQYDQTGKVIRGPAPLSLALSHVEEVDGKVIFKQWSETDFRNGEKPWW 154
             LA+PY+ FF+P  XXXXXX + A    G+ VT +SWL +H  G REL +G+KGDATYL+V EDKTI DYGI AVCTHLGCVVPWNKA   +MCPCHGSQYDQTGKV+RGPAPLSLAL+H+ +  G V F  W+ETDFR G KPWW
Sbjct:   22 GLAIPYVLFFIPRGXXXXXXGLPALTKAGDAVTFDSWLGSHKVGDRELVQGLKGDATYLIVDEDKTIRDYGINAVCTHLGCVVPWNKAANKYMCPCHGSQYDQTGKVVRGPAPLSLALAHITDDKGVVTFSPWTETDFRTGLKPWW 167          
BLAST of mRNA_L-elsbetiae_contig1616.4233.1 vs. uniprot
Match: A0A7S3NJN7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NJN7_9STRA)

HSP 1 Score: 210 bits (535), Expect = 1.420e-66
Identity = 92/147 (62.59%), Postives = 108/147 (73.47%), Query Frame = 0
Query:    9 SLAVPYIAFFVPXXXXXXXXXVTAKDAIGNEVTTESWLATHTAGSRELAEGIKGDATYLVVKEDKTIHDYGIVAVCTHLGCVVPWNKAEKTFMCPCHGSQYDQTGKVIRGPAPLSLALSHVEEVDGKVIFKQWSETDFRNGEKPWWT 155
             L +PYI FF+P         V A    G+ VT E WL++H  G REL +G+KGDATYL+V E K I DYGI AVCTHLGCVVPWNKA   +MCPCHGSQYDQTGKV+RGPAPLSLAL+H+   DGK++F  W+ETDFR G KPWW+
Sbjct:   68 GLGIPYILFFIPRGTGGGGAGVPALTKAGDPVTAEGWLSSHNVGDRELVQGLKGDATYLIVDEGKVIRDYGINAVCTHLGCVVPWNKAANKYMCPCHGSQYDQTGKVVRGPAPLSLALAHLNNEDGKLLFSTWTETDFRTGLKPWWS 214          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1616.4233.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FL45_ECTSI7.870e-9288.96Plastoquinol--plastocyanin reductase n=2 Tax=Ectoc... [more]
A0A835YPA4_9STRA4.900e-7669.48Plastoquinol--plastocyanin reductase n=1 Tax=Tribo... [more]
W7TXJ0_9STRA1.610e-7566.88Plastoquinol--plastocyanin reductase n=2 Tax=Monod... [more]
A0A836CBH8_9STRA4.000e-7568.18Plastoquinol--plastocyanin reductase n=1 Tax=Tribo... [more]
A0A7S1U2M5_9STRA8.620e-7265.13Plastoquinol--plastocyanin reductase n=2 Tax=Phaeo... [more]
A0A835ZDT9_9STRA2.410e-6864.10Cytochrome b6-f complex iron-sulfur subunit, chlor... [more]
A0A2D5MSC7_9BACT8.270e-6861.04Cytochrome b6-f complex iron-sulfur subunit n=1 Ta... [more]
A0A2K1KX88_PHYPA8.820e-6760.65Plastoquinol--plastocyanin reductase n=4 Tax=Physc... [more]
F0YEX1_AURAN1.300e-6667.12Uncharacterized protein petC n=1 Tax=Aureococcus a... [more]
A0A7S3NJN7_9STRA1.420e-6662.59Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005805Rieske iron-sulphur protein, C-terminalPRINTSPR00162RIESKEcoord: 112..124
score: 59.42
coord: 79..90
score: 66.04
coord: 100..112
score: 63.46
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilyGENE3D2.102.10.10coord: 18..155
e-value: 1.4E-46
score: 159.4
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilySUPERFAMILY50022ISP domaincoord: 13..154
IPR017941Rieske [2Fe-2S] iron-sulphur domainPFAMPF00355Rieskecoord: 62..124
e-value: 1.9E-13
score: 50.1
IPR017941Rieske [2Fe-2S] iron-sulphur domainPROSITEPS51296RIESKEcoord: 48..138
score: 22.918
NoneNo IPR availablePANTHERPTHR10134:SF5CYTOCHROME B6-F COMPLEX IRON-SULFUR SUBUNIT, CHLOROPLASTICcoord: 2..155
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.455
NoneNo IPR availableTMHMMTMhelixcoord: 10..32
IPR014349Rieske iron-sulphur proteinPANTHERPTHR10134CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIALcoord: 2..155

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1616contigL-elsbetiae_contig1616:2454..2921 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1616.4233.1mRNA_L-elsbetiae_contig1616.4233.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1616 2454..2921 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1616.4233.1 ID=prot_L-elsbetiae_contig1616.4233.1|Name=mRNA_L-elsbetiae_contig1616.4233.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=156bp
GPLGVNVLSLAVPYIAFFVPPGGGAGGGGVTAKDAIGNEVTTESWLATHT
AGSRELAEGIKGDATYLVVKEDKTIHDYGIVAVCTHLGCVVPWNKAEKTF
MCPCHGSQYDQTGKVIRGPAPLSLALSHVEEVDGKVIFKQWSETDFRNGE
KPWWT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005805Rieske_Fe-S_prot_C
IPR036922Rieske_2Fe-2S_sf
IPR017941Rieske_2Fe-2S
IPR014349Rieske_Fe-S_prot