prot_L-elsbetiae_contig16154.4231.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig16154.4231.1
Unique Nameprot_L-elsbetiae_contig16154.4231.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length80
Homology
BLAST of mRNA_L-elsbetiae_contig16154.4231.1 vs. uniprot
Match: D8LQ01_ECTSI (Structural maintenance of chromosomes protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ01_ECTSI)

HSP 1 Score: 128 bits (321), Expect = 1.220e-32
Identity = 65/73 (89.04%), Postives = 71/73 (97.26%), Query Frame = 0
Query:    6 RESAAGKSGALRALLEAAAPGGALHGAGVCGRLGDLGVIGAAYDVAVSSCTGQMDNIVVQTAEGASACVEYLR 78
            RESAAGK+GALRALLEA++PGGALHGAG+CGRLGDLG IGA YDVAVSSCTGQMDNIVVQ+AEGA+ACVEYLR
Sbjct:  596 RESAAGKTGALRALLEASSPGGALHGAGICGRLGDLGAIGADYDVAVSSCTGQMDNIVVQSAEGATACVEYLR 668          
BLAST of mRNA_L-elsbetiae_contig16154.4231.1 vs. uniprot
Match: I2CQB6_NANGC (Nuclear condensin complex subunit smc4 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQB6_NANGC)

HSP 1 Score: 79.7 bits (195), Expect = 1.720e-17
Identity = 45/78 (57.69%), Postives = 57/78 (73.08%), Query Frame = 0
Query:    1 QAKASRESAAGKSGALRALLEAAAPGGALHGAGVCGRLGDLGVIGAAYDVAVSSCTGQMDNIVVQTAEGASACVEYLR 78
            +AKAS +  A  S   +AL +A+ PGGAL  AG+ GRLGDLG I AAYDVAVS+    +D +VV+TA+G SACV+YLR
Sbjct:   11 EAKASLQRTASLSSTHKALFQASLPGGALASAGIRGRLGDLGGIAAAYDVAVSTAGAALDFLVVETAQGGSACVQYLR 88          
BLAST of mRNA_L-elsbetiae_contig16154.4231.1 vs. uniprot
Match: A0A1W0A1W6_9STRA (Structural maintenance of chromosomes protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A1W6_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 3.580e-13
Identity = 38/72 (52.78%), Postives = 52/72 (72.22%), Query Frame = 0
Query:    7 ESAAGKSGALRALLEAAAPGGALHGAGVCGRLGDLGVIGAAYDVAVSSCTGQMDNIVVQTAEGASACVEYLR 78
            +S A +S  L++L++AA PG  L GAG+ GRLGDLG I   YDVA+S+  G +DN+VV+T  GA  CV++LR
Sbjct:  584 QSHATQSRMLKSLMDAARPGFPLDGAGLLGRLGDLGAIDEKYDVAISTACGALDNLVVETTSGAQRCVDHLR 655          
BLAST of mRNA_L-elsbetiae_contig16154.4231.1 vs. uniprot
Match: A0A485LJE1_9STRA (Structural maintenance of chromosomes protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LJE1_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 9.120e-13
Identity = 36/63 (57.14%), Postives = 46/63 (73.02%), Query Frame = 0
Query:   16 LRALLEAAAPGGALHGAGVCGRLGDLGVIGAAYDVAVSSCTGQMDNIVVQTAEGASACVEYLR 78
            L++L+ AA PG  L  AG+ GRLGDLG I A YDVA+S+  G +DN+VV+T +GA  CV YLR
Sbjct:  630 LKSLMTAARPGLELEHAGLLGRLGDLGAIDAKYDVAISTACGALDNLVVETTQGAQQCVAYLR 692          
BLAST of mRNA_L-elsbetiae_contig16154.4231.1 vs. uniprot
Match: F0YFI0_AURAN (Structural maintenance of chromosomes protein 4 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YFI0_AURAN)

HSP 1 Score: 67.8 bits (164), Expect = 2.080e-11
Identity = 35/65 (53.85%), Postives = 46/65 (70.77%), Query Frame = 0
Query:   14 GALRALLEAAAPGGALHGAGVCGRLGDLGVIGAAYDVAVSSCTGQMDNIVVQTAEGASACVEYLR 78
            GA+  +L+AA   G L  AGVCGRLGDLG + AAYDVA S+    +D++VV+TA G   C+E+LR
Sbjct: 1374 GAVGEVLKAAK--GPLKAAGVCGRLGDLGAVDAAYDVAASTAADMLDHVVVETAAGGQKCIEFLR 1436          
BLAST of mRNA_L-elsbetiae_contig16154.4231.1 vs. uniprot
Match: A0A1V9YVG2_9STRA (Structural maintenance of chromosomes protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YVG2_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 7.200e-11
Identity = 36/78 (46.15%), Postives = 52/78 (66.67%), Query Frame = 0
Query:    1 QAKASRESAAGKSGALRALLEAAAPGGALHGAGVCGRLGDLGVIGAAYDVAVSSCTGQMDNIVVQTAEGASACVEYLR 78
            +A AS +S   K+  ++ L++A   GG L GAG+ GRLGDLG I   YDVAV++  G +DN+VV+T  GA   ++YL+
Sbjct:  595 EATASVQSQVSKNRMIQKLMDATKAGGPLSGAGLRGRLGDLGAIDEQYDVAVTTACGALDNLVVETTSGAQMVIKYLK 672          
BLAST of mRNA_L-elsbetiae_contig16154.4231.1 vs. uniprot
Match: A0A7S1TQT9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TQT9_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 8.560e-11
Identity = 30/55 (54.55%), Postives = 39/55 (70.91%), Query Frame = 0
Query:   24 APGGALHGAGVCGRLGDLGVIGAAYDVAVSSCTGQMDNIVVQTAEGASACVEYLR 78
            AP G L GAGV GR+GDLG I A YDVAVS+  G ++N++V+  +G   C+ YLR
Sbjct:    1 APRGPLSGAGVIGRIGDLGAIDAKYDVAVSTACGVLENVLVEDGDGGKMCINYLR 55          
BLAST of mRNA_L-elsbetiae_contig16154.4231.1 vs. uniprot
Match: A0A507FQD7_9FUNG (Structural maintenance of chromosomes protein n=1 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507FQD7_9FUNG)

HSP 1 Score: 64.3 bits (155), Expect = 3.420e-10
Identity = 29/46 (63.04%), Postives = 36/46 (78.26%), Query Frame = 0
Query:   33 GVCGRLGDLGVIGAAYDVAVSSCTGQMDNIVVQTAEGASACVEYLR 78
            G+CGRLGDLGVI   YDVAV++  GQ+DNIVV T E A  C+E+L+
Sbjct:  587 GICGRLGDLGVIDDKYDVAVTTACGQLDNIVVDTVETAQRCIEFLK 632          
BLAST of mRNA_L-elsbetiae_contig16154.4231.1 vs. uniprot
Match: UPI0015684F87 (structural maintenance of chromosomes protein 4 n=2 Tax=Maniola TaxID=111919 RepID=UPI0015684F87)

HSP 1 Score: 64.3 bits (155), Expect = 3.430e-10
Identity = 30/46 (65.22%), Postives = 36/46 (78.26%), Query Frame = 0
Query:   33 GVCGRLGDLGVIGAAYDVAVSSCTGQMDNIVVQTAEGASACVEYLR 78
            G+ GRLGDLG I A YDVA+S+C G +DNIVV T + A ACVEYL+
Sbjct:  594 GIFGRLGDLGGIDAKYDVAISTCCGALDNIVVDTVDTAQACVEYLK 639          
BLAST of mRNA_L-elsbetiae_contig16154.4231.1 vs. uniprot
Match: A0A196S9W2_BLAHN (Structural maintenance of chromosomes protein n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196S9W2_BLAHN)

HSP 1 Score: 64.3 bits (155), Expect = 3.430e-10
Identity = 36/67 (53.73%), Postives = 47/67 (70.15%), Query Frame = 0
Query:   12 KSGALRALLEAAAPGGALHGAGVCGRLGDLGVIGAAYDVAVSSCTGQMDNIVVQTAEGASACVEYLR 78
            +SG L+ L++A+   G L  A + GRLGDLG I  AYDVAVS+ +  +D IVV TAEGA  C+EYL+
Sbjct:  544 RSGVLKLLMKAS-KNGELSQAQIFGRLGDLGEIDGAYDVAVSTASSALDYIVVDTAEGAQRCIEYLK 609          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16154.4231.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQ01_ECTSI1.220e-3289.04Structural maintenance of chromosomes protein n=2 ... [more]
I2CQB6_NANGC1.720e-1757.69Nuclear condensin complex subunit smc4 (Fragment) ... [more]
A0A1W0A1W6_9STRA3.580e-1352.78Structural maintenance of chromosomes protein n=1 ... [more]
A0A485LJE1_9STRA9.120e-1357.14Structural maintenance of chromosomes protein n=1 ... [more]
F0YFI0_AURAN2.080e-1153.85Structural maintenance of chromosomes protein 4 n=... [more]
A0A1V9YVG2_9STRA7.200e-1146.15Structural maintenance of chromosomes protein n=1 ... [more]
A0A7S1TQT9_9STRA8.560e-1154.55Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A507FQD7_9FUNG3.420e-1063.04Structural maintenance of chromosomes protein n=1 ... [more]
UPI0015684F873.430e-1065.22structural maintenance of chromosomes protein 4 n=... [more]
A0A196S9W2_BLAHN3.430e-1053.73Structural maintenance of chromosomes protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1060.20coord: 1..79
e-value: 1.3E-10
score: 42.8
NoneNo IPR availablePANTHERPTHR43939FAMILY NOT NAMEDcoord: 2..79
NoneNo IPR availablePANTHERPTHR43939:SF1STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 4coord: 2..79
IPR010935SMCs flexible hingePFAMPF06470SMC_hingecoord: 33..78
e-value: 8.1E-6
score: 26.1
IPR036277SMCs flexible hinge superfamilySUPERFAMILY75553Smc hinge domaincoord: 2..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig16154contigL-elsbetiae_contig16154:1338..2046 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig16154.4231.1mRNA_L-elsbetiae_contig16154.4231.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig16154 1338..2046 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig16154.4231.1 ID=prot_L-elsbetiae_contig16154.4231.1|Name=mRNA_L-elsbetiae_contig16154.4231.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=80bp
QAKASRESAAGKSGALRALLEAAAPGGALHGAGVCGRLGDLGVIGAAYDV
AVSSCTGQMDNIVVQTAEGASACVEYLRT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010935SMC_hinge
IPR036277SMC_hinge_sf