prot_L-elsbetiae_contig16151.4230.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig16151.4230.1
Unique Nameprot_L-elsbetiae_contig16151.4230.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length121
Homology
BLAST of mRNA_L-elsbetiae_contig16151.4230.1 vs. uniprot
Match: A0A4Y5T7V9_9PHAE (NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A4Y5T7V9_9PHAE)

HSP 1 Score: 202 bits (513), Expect = 3.690e-65
Identity = 97/120 (80.83%), Postives = 111/120 (92.50%), Query Frame = 0
Query:    1 MYYFNEYYAILIFSGISIILAIIIFGASYALAIVKSDSEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVFLFPWALSLSQLPSLAYWSILDFLFELVIGFIYAWKIGSLDWE 120
            M+Y +EYY+ILIF  IS++LA IIFGASY LA+  SDSEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVF+FPWA+SLSQ+PS+ YWS++DFLFELV+GFIYAWKIGSL+W 
Sbjct:    1 MFYLHEYYSILIFLVISVLLAFIIFGASYLLALSNSDSEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVFVFPWAISLSQMPSIGYWSMMDFLFELVVGFIYAWKIGSLEWS 120          
BLAST of mRNA_L-elsbetiae_contig16151.4230.1 vs. uniprot
Match: A0A0U1XDC4_9PHAE (NADH-ubiquinone oxidoreductase chain 3 n=66 Tax=Phaeophyceae TaxID=2870 RepID=A0A0U1XDC4_9PHAE)

HSP 1 Score: 200 bits (509), Expect = 1.500e-64
Identity = 97/120 (80.83%), Postives = 108/120 (90.00%), Query Frame = 0
Query:    1 MYYFNEYYAILIFSGISIILAIIIFGASYALAIVKSDSEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVFLFPWALSLSQLPSLAYWSILDFLFELVIGFIYAWKIGSLDWE 120
            M++  EYY  LIF G S+ LA +IFGASY LAI  SDSEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIET+FLFPWA+SLSQLPS+ YWS++DFLFELV+GFIYAW+IGSLDWE
Sbjct:    1 MFFLKEYYPALIFLGFSLFLAALIFGASYILAISDSDSEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETIFLFPWAVSLSQLPSIGYWSMMDFLFELVVGFIYAWQIGSLDWE 120          
BLAST of mRNA_L-elsbetiae_contig16151.4230.1 vs. uniprot
Match: Q2TU99_DICDH (NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Dictyota dichotoma TaxID=2876 RepID=Q2TU99_DICDH)

HSP 1 Score: 196 bits (499), Expect = 4.870e-63
Identity = 94/119 (78.99%), Postives = 109/119 (91.60%), Query Frame = 0
Query:    1 MYYFNEYYAILIFSGISIILAIIIFGASYALAIVKSDSEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVFLFPWALSLSQLPSLAYWSILDFLFELVIGFIYAWKIGSLDW 119
            M+Y +EYY +L+F  ISI+LA +IFG SY LA  K+DSEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVF+FPWA+SLSQLPS+ YWS++DFLFEL++GFIYAWKIGSL+W
Sbjct:    1 MFYLHEYYPVLLFFLISILLAFLIFGLSYILAFSKADSEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVFVFPWAVSLSQLPSVGYWSMMDFLFELIVGFIYAWKIGSLEW 119          
BLAST of mRNA_L-elsbetiae_contig16151.4230.1 vs. uniprot
Match: E6ZET4_ECTSI (NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=E6ZET4_ECTSI)

HSP 1 Score: 196 bits (498), Expect = 7.140e-63
Identity = 93/120 (77.50%), Postives = 109/120 (90.83%), Query Frame = 0
Query:    1 MYYFNEYYAILIFSGISIILAIIIFGASYALAIVKSDSEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVFLFPWALSLSQLPSLAYWSILDFLFELVIGFIYAWKIGSLDWE 120
            M++  EYY +LIF G S+ LA +IFGAS+ LA+  +D+EKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIET+FLFPW++SLSQLPS+ YWS+LDFLFELV+GFIYAW+IGSLDWE
Sbjct:    1 MFFLKEYYPVLIFLGFSLALAGVIFGASFILAVSDADTEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETIFLFPWSVSLSQLPSIGYWSMLDFLFELVVGFIYAWQIGSLDWE 120          
BLAST of mRNA_L-elsbetiae_contig16151.4230.1 vs. uniprot
Match: Q94YZ1_PYLLI (NADH-ubiquinone oxidoreductase chain 3 n=3 Tax=Ectocarpales TaxID=2877 RepID=Q94YZ1_PYLLI)

HSP 1 Score: 195 bits (496), Expect = 1.440e-62
Identity = 95/120 (79.17%), Postives = 106/120 (88.33%), Query Frame = 0
Query:    1 MYYFNEYYAILIFSGISIILAIIIFGASYALAIVKSDSEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVFLFPWALSLSQLPSLAYWSILDFLFELVIGFIYAWKIGSLDWE 120
            M+   EYY  LIF   S +LA IIFGASY LA+  +DSEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIET+FLFPWA+SLSQLPS+ YWS++DFLFELV+GFIYAW+IGSLDWE
Sbjct:    1 MFLLKEYYPALIFLVFSFVLAAIIFGASYILAVSSADSEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETIFLFPWAVSLSQLPSIGYWSMMDFLFELVVGFIYAWQIGSLDWE 120          
BLAST of mRNA_L-elsbetiae_contig16151.4230.1 vs. uniprot
Match: A0A8F0K0X7_9PHAE (NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0K0X7_9PHAE)

HSP 1 Score: 191 bits (486), Expect = 4.670e-61
Identity = 91/119 (76.47%), Postives = 107/119 (89.92%), Query Frame = 0
Query:    1 MYYFNEYYAILIFSGISIILAIIIFGASYALAIVKSDSEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVFLFPWALSLSQLPSLAYWSILDFLFELVIGFIYAWKIGSLDW 119
            M+ F+EYY +L+F  +  ILA+IIFGASY L   K+D+EKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIET+FLFPWA++LSQLPSL YWS++DFL ELV+GFIYAW+IGSL+W
Sbjct:    1 MFCFHEYYPVLLFLVVGFILAVIIFGASYFLVFSKADNEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETIFLFPWAITLSQLPSLGYWSMMDFLLELVVGFIYAWQIGSLEW 119          
BLAST of mRNA_L-elsbetiae_contig16151.4230.1 vs. uniprot
Match: A0A0U1WNN7_SARFS (NADH-ubiquinone oxidoreductase chain 3 n=22 Tax=Sargassaceae TaxID=3014 RepID=A0A0U1WNN7_SARFS)

HSP 1 Score: 191 bits (485), Expect = 6.840e-61
Identity = 92/120 (76.67%), Postives = 106/120 (88.33%), Query Frame = 0
Query:    1 MYYFNEYYAILIFSGISIILAIIIFGASYALAIVKSDSEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVFLFPWALSLSQLPSLAYWSILDFLFELVIGFIYAWKIGSLDWE 120
            M++  EY   LI+   S+ILA +IFGASY LA+ +SD+EKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVF+FPWA SLSQLP + YWS++DFLFELV+GFIYAW+IGSLDWE
Sbjct:    1 MFFLREYSPALIYLCFSLILASVIFGASYTLALAESDNEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVFIFPWAASLSQLPPVGYWSVIDFLFELVVGFIYAWQIGSLDWE 120          
BLAST of mRNA_L-elsbetiae_contig16151.4230.1 vs. uniprot
Match: A0A8E8U4L6_9PHAE (NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Phaeophyceae sp. TaxID=2249243 RepID=A0A8E8U4L6_9PHAE)

HSP 1 Score: 182 bits (461), Expect = 3.110e-57
Identity = 85/115 (73.91%), Postives = 103/115 (89.57%), Query Frame = 0
Query:    6 EYYAILIFSGISIILAIIIFGASYALAIVKSDSEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVFLFPWALSLSQLPSLAYWSILDFLFELVIGFIYAWKIGSLDWE 120
            EYY IL+F   S+ L+++IFGASY  +I + D+EK+SSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVFLFPW ++LS+LP++ YWS++DF+ ELVIGFIYAW+IGSLDWE
Sbjct:    6 EYYPILLFITFSLFLSLLIFGASYTFSIAEPDNEKVSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVFLFPWVVTLSELPAVGYWSMVDFIIELVIGFIYAWQIGSLDWE 120          
BLAST of mRNA_L-elsbetiae_contig16151.4230.1 vs. uniprot
Match: A0A7S6UA31_9STRA (NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6UA31_9STRA)

HSP 1 Score: 176 bits (447), Expect = 4.660e-55
Identity = 87/117 (74.36%), Postives = 102/117 (87.18%), Query Frame = 0
Query:    5 NEYYAILIFSGISIILAIIIFGASYALAIVKSDSEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVFLFPWALSLSQLP-SLAYWSILDFLFELVIGFIYAWKIGSLDWE 120
             EYY IL+F+ +SI LA +IFGASYALA+ K D+EKLSSYECGFDPYEDARNAFDVRFYLVAILFL+FD+E VFLFPWA+ L Q   SL  WS++DFLFEL++GF+YAW+IGSLDWE
Sbjct:    7 QEYYPILVFTFLSIGLAGLIFGASYALALAKPDTEKLSSYECGFDPYEDARNAFDVRFYLVAILFLIFDLEAVFLFPWAVGLGQQSTSLGLWSMIDFLFELLVGFVYAWQIGSLDWE 123          
BLAST of mRNA_L-elsbetiae_contig16151.4230.1 vs. uniprot
Match: A0A0K2RWM0_9STRA (NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Triparma laevis TaxID=1534972 RepID=A0A0K2RWM0_9STRA)

HSP 1 Score: 169 bits (429), Expect = 2.570e-52
Identity = 78/116 (67.24%), Postives = 99/116 (85.34%), Query Frame = 0
Query:    5 NEYYAILIFSGISIILAIIIFGASYALAIVKSDSEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVFLFPWALSLSQLPSLAYWSILDFLFELVIGFIYAWKIGSLDWE 120
             EYY IL+F  ++IIL+ +I GASY LA+   D+EKLS+YECGFDPYEDAR+ FDVRFYLVAILF++FDIE +FLFPWA+SL Q+ SL +WS++DF+ EL +GFIYAWKIG+L+WE
Sbjct:    8 QEYYPILLFLSVAIILSAVILGASYLLAVQNPDTEKLSAYECGFDPYEDARHTFDVRFYLVAILFIIFDIEAMFLFPWAVSLDQIGSLGFWSMVDFILELGVGFIYAWKIGALEWE 123          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16151.4230.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4Y5T7V9_9PHAE3.690e-6580.83NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Dic... [more]
A0A0U1XDC4_9PHAE1.500e-6480.83NADH-ubiquinone oxidoreductase chain 3 n=66 Tax=Ph... [more]
Q2TU99_DICDH4.870e-6378.99NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Dic... [more]
E6ZET4_ECTSI7.140e-6377.50NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Ect... [more]
Q94YZ1_PYLLI1.440e-6279.17NADH-ubiquinone oxidoreductase chain 3 n=3 Tax=Ect... [more]
A0A8F0K0X7_9PHAE4.670e-6176.47NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Pro... [more]
A0A0U1WNN7_SARFS6.840e-6176.67NADH-ubiquinone oxidoreductase chain 3 n=22 Tax=Sa... [more]
A0A8E8U4L6_9PHAE3.110e-5773.91NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Pha... [more]
A0A7S6UA31_9STRA4.660e-5574.36NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Sch... [more]
A0A0K2RWM0_9STRA2.570e-5267.24NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Tri... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038430NADH:ubiquinone oxidoreductase, subunit 3 superfamilyGENE3D1.20.58.1610coord: 1..120
e-value: 8.7E-37
score: 127.8
IPR000440NADH:ubiquinone/plastoquinone oxidoreductase, chain 3PFAMPF00507Oxidored_q4coord: 22..119
e-value: 9.5E-33
score: 112.3
IPR000440NADH:ubiquinone/plastoquinone oxidoreductase, chain 3PANTHERPTHR11058NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 3coord: 5..120
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 92..112
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 35..59
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..6
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 113..120
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 81..91
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 7..34
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 60..80
NoneNo IPR availableTMHMMTMhelixcoord: 94..116
NoneNo IPR availableTMHMMTMhelixcoord: 62..84
NoneNo IPR availableTMHMMTMhelixcoord: 10..32
IPR023043NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastidHAMAPMF_01394NDH1_NuoAcoord: 3..120
score: 17.429

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig16151contigL-elsbetiae_contig16151:654..1016 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig16151.4230.1mRNA_L-elsbetiae_contig16151.4230.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig16151 654..1016 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig16151.4230.1 ID=prot_L-elsbetiae_contig16151.4230.1|Name=mRNA_L-elsbetiae_contig16151.4230.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=121bp
MYYFNEYYAILIFSGISIILAIIIFGASYALAIVKSDSEKLSSYECGFDP
YEDARNAFDVRFYLVAILFLLFDIETVFLFPWALSLSQLPSLAYWSILDF
LFELVIGFIYAWKIGSLDWE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038430NDAH_ubi_oxred_su3_sf
IPR000440NADH_UbQ/plastoQ_OxRdtase_su3
IPR023043NAD(P)H_OxRDtase_bac/plastid