prot_L-elsbetiae_contig16135.4214.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig16135.4214.1
Unique Name	prot_L-elsbetiae_contig16135.4214.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	116

Homology

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BLAST of mRNA_L-elsbetiae_contig16135.4214.1 vs. uniprot
Match: W7TR01_9STRA (Histone H4 n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7TR01_9STRA)

HSP 1 Score: 204 bits (518), Expect = 6.110e-66
Identity = 106/115 (92.17%), Postives = 108/115 (93.91%), Query Frame = 0

Query:    1 YLLSQQHNSLPDMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 115
            YL S  H +   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTA+DVVYALKRQGRTLYGFGG
Sbjct:   11 YLGSSTHPNSQIMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTALDVVYALKRQGRTLYGFGG 125

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BLAST of mRNA_L-elsbetiae_contig16135.4214.1 vs. uniprot
Match: A0A4D9CLB0_9STRA (Histone H4 n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CLB0_9STRA)

HSP 1 Score: 203 bits (516), Expect = 1.020e-65
Identity = 105/115 (91.30%), Postives = 108/115 (93.91%), Query Frame = 0

Query:    1 YLLSQQHNSLPDMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 115
            Y L    ++L  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTA+DVVYALKRQGRTLYGFGG
Sbjct:    5 YRLLPSRDNLTAMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTALDVVYALKRQGRTLYGFGG 119

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BLAST of mRNA_L-elsbetiae_contig16135.4214.1 vs. uniprot
Match: UPI000528D6F7 (histone H4-like isoform X2 n=2 Tax=Euteleostomi TaxID=117571 RepID=UPI000528D6F7)

HSP 1 Score: 202 bits (513), Expect = 2.180e-65
Identity = 105/113 (92.92%), Postives = 110/113 (97.35%), Query Frame = 0

Query:    3 LSQQHNSLPDMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 115
            ++QQH+S   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRD+VTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    1 MNQQHSS---MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 110

[Close]

BLAST of mRNA_L-elsbetiae_contig16135.4214.1 vs. uniprot
Match: UPI001ABDC554 (histone H4-like n=1 Tax=Bufo bufo TaxID=8384 RepID=UPI001ABDC554)

HSP 1 Score: 204 bits (519), Expect = 5.430e-65
Identity = 105/115 (91.30%), Postives = 109/115 (94.78%), Query Frame = 0

Query:    1 YLLSQQHNSLPDMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 115
            Y L +Q  +L  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRD+VTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   89 YALKRQGRTLYGMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 203

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BLAST of mRNA_L-elsbetiae_contig16135.4214.1 vs. uniprot
Match: A0A453J6R2_AEGTS (Histone H4 n=2 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453J6R2_AEGTS)

HSP 1 Score: 201 bits (512), Expect = 7.180e-65
Identity = 103/113 (91.15%), Postives = 107/113 (94.69%), Query Frame = 0

Query:    3 LSQQHNSLPDMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 115
            + Q+    P MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRD+VTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   24 IPQRRPQQPAMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 136

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BLAST of mRNA_L-elsbetiae_contig16135.4214.1 vs. uniprot
Match: A0A453N2X0_AEGTS (Histone H4 n=2 Tax=Mesangiospermae TaxID=1437183 RepID=A0A453N2X0_AEGTS)

HSP 1 Score: 200 bits (509), Expect = 1.110e-64
Identity = 104/114 (91.23%), Postives = 108/114 (94.74%), Query Frame = 0

Query:    2 LLSQQHNSLPDMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 115
            L  Q  ++ P MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRD+VTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    4 LHFQTPSAPPIMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 117

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BLAST of mRNA_L-elsbetiae_contig16135.4214.1 vs. uniprot
Match: A0A8J5LQK2_ZINOF (Histone H4 n=1 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5LQK2_ZINOF)

HSP 1 Score: 201 bits (511), Expect = 1.370e-64
Identity = 103/107 (96.26%), Postives = 105/107 (98.13%), Query Frame = 0

Query:    9 SLPDMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 115
            S  DMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRD+VTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   39 SFVDMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 145

[Close]

BLAST of mRNA_L-elsbetiae_contig16135.4214.1 vs. uniprot
Match: A0A7S3KWS3_9STRA (Histone H4 n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3KWS3_9STRA)

HSP 1 Score: 200 bits (509), Expect = 1.390e-64
Identity = 105/114 (92.11%), Postives = 107/114 (93.86%), Query Frame = 0

Query:    2 LLSQQHNSLPDMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 115
             L  QH  +  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQG+TLYGFGG
Sbjct:   13 FLRNQHQFI--MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGKTLYGFGG 124

[Close]

BLAST of mRNA_L-elsbetiae_contig16135.4214.1 vs. uniprot
Match: W5PHH3_SHEEP (Histone H4 n=4 Tax=Pecora TaxID=35500 RepID=W5PHH3_SHEEP)

HSP 1 Score: 199 bits (507), Expect = 1.580e-64
Identity = 102/106 (96.23%), Postives = 105/106 (99.06%), Query Frame = 0

Query:   10 LPDMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 115
            + DMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRD+VTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    1 VADMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 106

[Close]

BLAST of mRNA_L-elsbetiae_contig16135.4214.1 vs. uniprot
Match: A0A7J6GM37_CANSA (Histone H4 n=1 Tax=Cannabis sativa TaxID=3483 RepID=A0A7J6GM37_CANSA)

HSP 1 Score: 203 bits (516), Expect = 1.760e-64
Identity = 106/119 (89.08%), Postives = 110/119 (92.44%), Query Frame = 0

Query:    1 YLLSQQHNSL----PDMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 115
            Y L +Q  +L    P MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRD+VTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   89 YALKRQGRTLEGKEPKMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 207

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig16135.4214.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig16135.4214.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
W7TR01_9STRA	6.110e-66	92.17	Histone H4 n=4 Tax=Monodopsidaceae TaxID=425072 Re...	[more]
A0A4D9CLB0_9STRA	1.020e-65	91.30	Histone H4 n=1 Tax=Nannochloropsis salina CCMP1776...	[more]
UPI000528D6F7	2.180e-65	92.92	histone H4-like isoform X2 n=2 Tax=Euteleostomi Ta...	[more]
UPI001ABDC554	5.430e-65	91.30	histone H4-like n=1 Tax=Bufo bufo TaxID=8384 RepID...	[more]
A0A453J6R2_AEGTS	7.180e-65	91.15	Histone H4 n=2 Tax=Aegilops tauschii subsp. strang...	[more]
A0A453N2X0_AEGTS	1.110e-64	91.23	Histone H4 n=2 Tax=Mesangiospermae TaxID=1437183 R...	[more]
A0A8J5LQK2_ZINOF	1.370e-64	96.26	Histone H4 n=1 Tax=Zingiber officinale TaxID=94328...	[more]
A0A7S3KWS3_9STRA	1.390e-64	92.11	Histone H4 n=1 Tax=Amphora coffeiformis TaxID=2655...	[more]
W5PHH3_SHEEP	1.580e-64	96.23	Histone H4 n=4 Tax=Pecora TaxID=35500 RepID=W5PHH3...	[more]
A0A7J6GM37_CANSA	1.760e-64	89.08	Histone H4 n=1 Tax=Cannabis sativa TaxID=3483 RepI...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001951	Histone H4	PRINTS	PR00623	HISTONEH4	coord: 74..88 score: 91.96 coord: 32..51 score: 93.38 coord: 52..72 score: 93.56 coord: 89..101 score: 90.05 coord: 17..28 score: 95.59 coord: 101..112 score: 97.79
IPR001951	Histone H4	SMART	SM00417	h44	coord: 28..102 e-value: 1.8E-29 score: 113.9
IPR009072	Histone-fold	GENE3D	1.10.20.10		coord: 14..115 e-value: 3.4E-60 score: 202.5
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 15..114
IPR035425	CENP-T/Histone H4, histone fold	PFAM	PF15511	CENP-T_C	coord: 48..108 e-value: 2.8E-8 score: 33.8
None	No IPR available	PANTHER	PTHR10484:SF171		coord: 8..115
None	No IPR available	PANTHER	PTHR10484	HISTONE H4	coord: 8..115
IPR019809	Histone H4, conserved site	PROSITE	PS00047	HISTONE_H4	coord: 27..31

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig16135	contig	L-elsbetiae_contig16135:388..735 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig16135.4214.1	mRNA_L-elsbetiae_contig16135.4214.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig16135 388..735 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig16135.4214.1 ID=prot_L-elsbetiae_contig16135.4214.1|Name=mRNA_L-elsbetiae_contig16135.4214.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=116bp
YLLSQQHNSLPDMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRL
ARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVV
YALKRQGRTLYGFGG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001951	Histone_H4
IPR009072	Histone-fold
IPR035425	CENP-T/H4_C
IPR019809	Histone_H4_CS