prot_L-elsbetiae_contig16128.4208.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig16128.4208.1
Unique Nameprot_L-elsbetiae_contig16128.4208.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length501
Homology
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BLAST of mRNA_L-elsbetiae_contig16128.4208.1 vs. uniprot
Match: A0A6H5KAA0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAA0_9PHAE)

HSP 1 Score: 66.2 bits (160), Expect = 1.020e-7
Identity = 62/174 (35.63%), Postives = 79/174 (45.40%), Query Frame = 0 
Query:  242 LHQTIGELEAYVALEASKRLEAECRAQNLEAGLQVLADRCDLEIAARETAESAAKRYMDLIAEARAAWQRTQDIVQNKERELA------------------------------------------AAETRXXXXXXXXXXXXXDPASLQRRLEDARKDKEMDRQHAASLKLALE 373
            L   I +LE     +ASK  EAE RA++LE  L+ LADRC LE AARE AE  A+R M + AEAR A +  + + + K+RELA                                          AAE R                SLQRRL DAR+ +E++RQ +   KLALE
Sbjct:  604 LRARIEQLEVSAQTQASKHGEAERRAESLEGELRGLADRCRLETAAREAAERDAQRCMGMFAEARVARKDARVVAEGKDRELASEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAEARMMKTEAGGGF-----CSLQRRLGDARRGRELNRQQSLEFKLALE 772
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16128.4208.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KAA0_9PHAE1.020e-735.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 288..308

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig16128contigL-elsbetiae_contig16128:1064..2585 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig16128.4208.1mRNA_L-elsbetiae_contig16128.4208.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig16128 708..2766 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig16128.4208.1 ID=prot_L-elsbetiae_contig16128.4208.1|Name=mRNA_L-elsbetiae_contig16128.4208.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=501bp
MVNKGQQPLKVGIMVQERQGGLQQGAGHRFGGGGWGGSQERDVGTPPLAV
KPPRRLGDPETLESRGGSGWVDRNSDCRAAAVAASAFQATDHGGRLGSGS
GGGSSSGSNSGSGGGSGGSGGGGGAADTLVSHDSDAELDRLWDRFNSLKG
ELPATSNMPPPPPAEHGCSGSGSGARRAGPAGGGGGGADEDATALKPFRE
REQEREAWAHRRDVAGKLEDIQRALAAKADDGRRRQDELEGLHQTIGELE
AYVALEASKRLEAECRAQNLEAGLQVLADRCDLEIAARETAESAAKRYMD
LIAEARAAWQRTQDIVQNKERELAAAETREERAAGGGGGGGGDPASLQRR
LEDARKDKEMDRQHAASLKLALERGSVSSSPGSAAAVTPVTLEPSLKAGR
RRSAGCVANVRARPERRASGTTKALPASRRQSLDDGRVAAAEVRLQVAID
QAAAAAATSNKTRDTSSPGSSSSSSSSSAATPVRPFPDPASSRRPRTGRS
*
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