prot_L-elsbetiae_contig16124.4206.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig16124.4206.1
Unique Nameprot_L-elsbetiae_contig16124.4206.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length244
Homology
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BLAST of mRNA_L-elsbetiae_contig16124.4206.1 vs. uniprot
Match: D7G8I4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8I4_ECTSI)

HSP 1 Score: 323 bits (829), Expect = 5.700e-107
Identity = 173/245 (70.61%), Postives = 194/245 (79.18%), Query Frame = 0 
Query:    1 MGRYRP-RVFAVVSTCCCVCICRGWNPATLHHIANRQPPARGTAWSRTARVAPPWRPDHPKADTALAAAARAPRDPWEAAAAEQEAQKNGSEGEKRVIPRLKMDDSPIPEHLIDMLKESGDIDEDGNPVNDFFDPDEDDTFGTQRERDRFTEEQNYYNDVPFGDMLFEGKAGDDNSEFTGSLMDTSINNAAFEFGFPVEFFLDMLCRWEVTLPINQDCRLGDMIDAEQAAALCEALTGLDASDVR 244
            M R RP  + A  +TCCC+   +GWNP    +       AR T WSR ARVA      H +A  A+AAA  APRDPWEAA   QEA++   +G+K+ +PRLKMDDSPIPE+LIDMLKESGD+DEDG PVNDFFDPDEDDTFGTQRERDR  EE+ YYNDVPFGDMLFEGKAG +N++ TGSLMDTSINNA FE+GFPVEFFLDMLCRW VTLPINQD RLGDMIDAEQAAALCEALTGLDA+DVR
Sbjct:    1 MRRCRPCALAAAATTCCCLRFSQGWNPVATLNPGLTSAAARATPWSRAARVASARPSQHTRARAAIAAAV-APRDPWEAAG--QEAKEGDEKGKKKAMPRLKMDDSPIPEYLIDMLKESGDVDEDGKPVNDFFDPDEDDTFGTQRERDRLKEEELYYNDVPFGDMLFEGKAGGENAQDTGSLMDTSINNAVFEYGFPVEFFLDMLCRWGVTLPINQDRRLGDMIDAEQAAALCEALTGLDAADVR 242
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16124.4206.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G8I4_ECTSI5.700e-10770.61Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..244

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig16124contigL-elsbetiae_contig16124:766..3756 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig16124.4206.1mRNA_L-elsbetiae_contig16124.4206.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig16124 766..3756 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig16124.4206.1 ID=prot_L-elsbetiae_contig16124.4206.1|Name=mRNA_L-elsbetiae_contig16124.4206.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=244bp
MGRYRPRVFAVVSTCCCVCICRGWNPATLHHIANRQPPARGTAWSRTARV
APPWRPDHPKADTALAAAARAPRDPWEAAAAEQEAQKNGSEGEKRVIPRL
KMDDSPIPEHLIDMLKESGDIDEDGNPVNDFFDPDEDDTFGTQRERDRFT
EEQNYYNDVPFGDMLFEGKAGDDNSEFTGSLMDTSINNAAFEFGFPVEFF
LDMLCRWEVTLPINQDCRLGDMIDAEQAAALCEALTGLDASDVR
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