prot_L-elsbetiae_contig16109.4199.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig16109.4199.1
Unique Nameprot_L-elsbetiae_contig16109.4199.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length158
Homology
BLAST of mRNA_L-elsbetiae_contig16109.4199.1 vs. uniprot
Match: A0A6H5KY84_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY84_9PHAE)

HSP 1 Score: 75.9 bits (185), Expect = 4.900e-13
Identity = 36/72 (50.00%), Postives = 47/72 (65.28%), Query Frame = 0
Query:    1 WSDLLDKFQPDDQQYRRELIAELNSISMKEGTDPDTFLAEVQDLANKLEYLGEGVSDARLADIVLQGLPPSY 72
            W +L  KFQP D+  RR L  EL S +M+ GTDPD F+  V  LA +L ++G  V+D +L DI+LQGLP  Y
Sbjct:  236 WKELESKFQPADEHRRRNLERELESATMRTGTDPDIFITHVWHLAEQLRFIGGTVTDEKLGDIILQGLPAEY 307          
BLAST of mRNA_L-elsbetiae_contig16109.4199.1 vs. uniprot
Match: A0A6H5JLQ5_9PHAE (CCHC-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLQ5_9PHAE)

HSP 1 Score: 72.0 bits (175), Expect = 1.350e-12
Identity = 43/137 (31.39%), Postives = 68/137 (49.64%), Query Frame = 0
Query:   17 RELIAELNSISMKEGTDPDTFLAEVQDLANKLEYLGEGVSDARLADIVLQGLPPSYDQLRLMADMDSGFTFAKIERTARNMYKSHSRGRQQQRHGHQRDTHVRDSGMVAFSSKPHGSTQLTCHSCGEPGHVQRLCPR 153
            R  + EL +  M  G +PD +  +   L  +L+ +GE +SD R  DI +QG    Y  ++L+   D  F    ++ T RN++       +Q R G +     R   MV  +S      ++ CHSC EPGH++R CP+
Sbjct:   68 RAKMEELENNPMNPGENPDDYFNQKHLLRTQLDKMGEPISDRRFKDICVQGFSDEYKDVKLIVLRDPTFNVLDMQSTMRNIFLD-----EQSRKGWKGRIAGRGFSMVTTAS------EIICHSCYEPGHIRRNCPK 193          
BLAST of mRNA_L-elsbetiae_contig16109.4199.1 vs. uniprot
Match: A0A6H5JZ53_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ53_9PHAE)

HSP 1 Score: 73.9 bits (180), Expect = 2.020e-12
Identity = 43/134 (32.09%), Postives = 66/134 (49.25%), Query Frame = 0
Query:   20 IAELNSISMKEGTDPDTFLAEVQDLANKLEYLGEGVSDARLADIVLQGLPPSYDQLRLMADMDSGFTFAKIERTARNMYKSHSRGRQQQRHGHQRDTHVRDSGMVAFSSKPHGSTQLTCHSCGEPGHVQRLCPR 153
            + EL +  M  G +PD +  +   L  +L+ +GE +SD R  DI +QG    Y+ ++LM   D  F    ++ T RN+Y       +Q R G +     R   M   +S       + CHSC EPGH++R CP+
Sbjct:    1 MEELENNPMNPGENPDDYFNQKHPLCVQLDKMGEPISDRRFKDICVQGFSDEYEDVKLMLFRDPTFNVLDMQSTMRNIYLD-----EQSRKGWKGRIAGRGFAMATTAS------DIICHSCYEPGHIRRNCPK 123          
BLAST of mRNA_L-elsbetiae_contig16109.4199.1 vs. uniprot
Match: A0A6H5JF66_9PHAE (CCHC-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF66_9PHAE)

HSP 1 Score: 72.0 bits (175), Expect = 7.370e-12
Identity = 43/137 (31.39%), Postives = 66/137 (48.18%), Query Frame = 0
Query:   17 RELIAELNSISMKEGTDPDTFLAEVQDLANKLEYLGEGVSDARLADIVLQGLPPSYDQLRLMADMDSGFTFAKIERTARNMYKSHSRGRQQQRHGHQRDTHVRDSGMVAFSSKPHGSTQLTCHSCGEPGHVQRLCPR 153
            R  + EL +  M  G +PD +  +   L  +L+ +GE +SD R  DI +QG    Y  ++LM   D  F    ++ T RN++       +Q R G +     R   M   +S       + CHSC EPGH++R CP+
Sbjct:  135 RAKMEELENNPMNPGENPDNYFNQKHLLRTQLDKMGEPISDRRFKDICVQGFSDEYKDVKLMVFRDPTFNVLDMQSTMRNIFLD-----EQSRKGWKGRIAGRGFAMATTAS------DIICHSCYEPGHIRRNCPK 260          
BLAST of mRNA_L-elsbetiae_contig16109.4199.1 vs. uniprot
Match: A0A6H5L580_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L580_9PHAE)

HSP 1 Score: 69.7 bits (169), Expect = 6.350e-11
Identity = 43/137 (31.39%), Postives = 65/137 (47.45%), Query Frame = 0
Query:   17 RELIAELNSISMKEGTDPDTFLAEVQDLANKLEYLGEGVSDARLADIVLQGLPPSYDQLRLMADMDSGFTFAKIERTARNMYKSHSRGRQQQRHGHQRDTHVRDSGMVAFSSKPHGSTQLTCHSCGEPGHVQRLCPR 153
            R  + EL +  M  G +PD +  +   L  +L+ +GE +SD R  DI +QG    Y  ++LM   D  F    +  T RN++       +Q R G +     R   M   +S       + CHSC EPGH++R CP+
Sbjct:  153 RAKMEELENNPMNPGENPDDYFNQKHLLRTQLDKMGEPISDRRFKDICVQGFSDEYKDVKLMVFRDPTFNVLDMLSTMRNIFLD-----EQSRKGWKGRIAGRGFAMATTAS------DIICHSCYEPGHIRRNCPK 278          
BLAST of mRNA_L-elsbetiae_contig16109.4199.1 vs. uniprot
Match: A0A6H5KT84_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT84_9PHAE)

HSP 1 Score: 69.3 bits (168), Expect = 8.640e-11
Identity = 43/137 (31.39%), Postives = 65/137 (47.45%), Query Frame = 0
Query:   17 RELIAELNSISMKEGTDPDTFLAEVQDLANKLEYLGEGVSDARLADIVLQGLPPSYDQLRLMADMDSGFTFAKIERTARNMYKSHSRGRQQQRHGHQRDTHVRDSGMVAFSSKPHGSTQLTCHSCGEPGHVQRLCPR 153
            R  + EL +  M  G +PD +  +   L  +L+ +GE +SD R  DI +QG    Y  ++LM   D  F    ++ T RN++       +Q R G +     R   M   +S         CHSC EPGH++R CP+
Sbjct:  111 RTKMEELENNPMNLGENPDDYFNQKHLLRTQLDKMGEPISDRRFKDICVQGFSDEYKDVKLMVFRDPTFNVLDMQSTMRNIFLD-----EQSRKGWKGRIAGRGFAMATTAS------DSICHSCYEPGHIRRNCPK 236          
BLAST of mRNA_L-elsbetiae_contig16109.4199.1 vs. uniprot
Match: A0A6H5KZM5_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZM5_9PHAE)

HSP 1 Score: 68.2 bits (165), Expect = 1.350e-10
Identity = 41/134 (30.60%), Postives = 64/134 (47.76%), Query Frame = 0
Query:   20 IAELNSISMKEGTDPDTFLAEVQDLANKLEYLGEGVSDARLADIVLQGLPPSYDQLRLMADMDSGFTFAKIERTARNMYKSHSRGRQQQRHGHQRDTHVRDSGMVAFSSKPHGSTQLTCHSCGEPGHVQRLCPR 153
            + EL +  M  G +PD +  +   L  +L+ +GE +SD R  DI +QG    Y  ++LM   D  F    ++ T RN++       +Q R   +     R   M   +S       + CHSC EPGH++R CP+
Sbjct:    1 MEELENNPMNPGENPDDYFNQKHLLRTQLDKMGEPISDRRFKDICVQGFSDEYKDVKLMVFRDPTFNVLDMQSTMRNIFLD-----EQSRKEWKGRIAGRGFAMATTAS------DIICHSCYEPGHIRRNCPK 123          
BLAST of mRNA_L-elsbetiae_contig16109.4199.1 vs. uniprot
Match: A0A6H5JQ58_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ58_9PHAE)

HSP 1 Score: 66.2 bits (160), Expect = 4.330e-10
Identity = 39/126 (30.95%), Postives = 61/126 (48.41%), Query Frame = 0
Query:   28 MKEGTDPDTFLAEVQDLANKLEYLGEGVSDARLADIVLQGLPPSYDQLRLMADMDSGFTFAKIERTARNMYKSHSRGRQQQRHGHQRDTHVRDSGMVAFSSKPHGSTQLTCHSCGEPGHVQRLCPR 153
            M+   +PD F  E+  L + L  +GE +S  R  DI +QG    Y  +++M   D  F   +++ T RN++       +Q R G +     R   M   +S       + CHSC EPGH++R CP+
Sbjct:    1 MEPVENPDDFFNEIHRLRSHLAKIGETISGRRFKDICVQGFSEDYKDIKMMVFRDPSFDEQQMQSTMRNIFLD-----EQSRKGWKGRIAGRGFAMATTASN------IICHSCYEPGHIRRNCPK 115          
BLAST of mRNA_L-elsbetiae_contig16109.4199.1 vs. uniprot
Match: A0A6H5K8X5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8X5_9PHAE)

HSP 1 Score: 66.6 bits (161), Expect = 7.500e-10
Identity = 41/137 (29.93%), Postives = 65/137 (47.45%), Query Frame = 0
Query:   17 RELIAELNSISMKEGTDPDTFLAEVQDLANKLEYLGEGVSDARLADIVLQGLPPSYDQLRLMADMDSGFTFAKIERTARNMYKSHSRGRQQQRHGHQRDTHVRDSGMVAFSSKPHGSTQLTCHSCGEPGHVQRLCPR 153
            R  + EL +  M  G +PD +  +   L   L+ +GE +SD R  +I +QG    Y   +LM   D  F    ++ T RN++       +Q R G +     R+    + +S       + CHSC EPGH++R CP+
Sbjct:  135 RAKMEELENKPMNPGENPDDYFNQKHLLRAHLDKMGEPISDRRFKNICVQGFSDEYKGFKLMVVRDPTFNALDMQSTMRNIFSD-----EQSRKGWKGRIGGREFATASTAS------DIICHSCYEPGHIRRNCPK 260          
BLAST of mRNA_L-elsbetiae_contig16109.4199.1 vs. uniprot
Match: A0A6H5KXR7_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXR7_9PHAE)

HSP 1 Score: 66.2 bits (160), Expect = 8.430e-10
Identity = 43/137 (31.39%), Postives = 65/137 (47.45%), Query Frame = 0
Query:   17 RELIAELNSISMKEGTDPDTFLAEVQDLANKLEYLGEGVSDARLADIVLQGLPPSYDQLRLMADMDSGFTFAKIERTARNMYKSHSRGRQQQRHGHQRDTHVRDSGMVAFSSKPHGSTQLTCHSCGEPGHVQRLCPR 153
            R  + EL +  M  G +PD +  +   +  +L+ +GE +SD R  DI +QG    Y  ++LM   D  F    ++ T RN     S   +Q R G +     R   M   +S       + CHSC EPGH++R CP+
Sbjct:   93 RAKMEELENNPMNPGENPDDYFNQKHLIRAQLDKMGEPISDRRCKDIWVQGFSDEYRDVKLMVFRDPTFNALGMQSTIRNT----SWTNEQSRKGWKGRIAGRGFAMATTAS------DIICHSCYEPGHIRRNCPK 219          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16109.4199.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
A0A6H5KY84_9PHAE4.900e-1350.00Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JLQ5_9PHAE1.350e-1231.39CCHC-type domain-containing protein (Fragment) n=1... [more]
A0A6H5JZ53_9PHAE2.020e-1232.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JF66_9PHAE7.370e-1231.39CCHC-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5L580_9PHAE6.350e-1131.39CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KT84_9PHAE8.640e-1131.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KZM5_9PHAE1.350e-1030.60CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JQ58_9PHAE4.330e-1030.95CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K8X5_9PHAE7.500e-1029.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KXR7_9PHAE8.430e-1031.39CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 1..81
e-value: 1.5E-13
score: 50.6
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 137..152
e-value: 1.2E-4
score: 22.0
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 138..153
score: 9.785
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 117..156

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig16109contigL-elsbetiae_contig16109:1047..1520 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig16109.4199.1mRNA_L-elsbetiae_contig16109.4199.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig16109 1047..1520 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig16109.4199.1 ID=prot_L-elsbetiae_contig16109.4199.1|Name=mRNA_L-elsbetiae_contig16109.4199.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=158bp
WSDLLDKFQPDDQQYRRELIAELNSISMKEGTDPDTFLAEVQDLANKLEY
LGEGVSDARLADIVLQGLPPSYDQLRLMADMDSGFTFAKIERTARNMYKS
HSRGRQQQRHGHQRDTHVRDSGMVAFSSKPHGSTQLTCHSCGEPGHVQRL
CPRRQQRR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
IPR036875Znf_CCHC_sf