prot_L-elsbetiae_contig1610.4194.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1610.4194.1
Unique Nameprot_L-elsbetiae_contig1610.4194.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length181
Homology
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BLAST of mRNA_L-elsbetiae_contig1610.4194.1 vs. uniprot
Match: A0A6H5JLT2_9PHAE (GPS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLT2_9PHAE)

HSP 1 Score: 201 bits (511), Expect = 7.620e-57
Identity = 107/180 (59.44%), Postives = 127/180 (70.56%), Query Frame = 0 
Query:    2 SHKSELMPCMDAVNHSYMATVHMVKHYGTPAK-PNDHNHVSIVAEINISALRESAAVKIQAVVRMHQAYSRTMRRQEVKVWHGPIVLDMRKRLTFRAYASLAIYTLVIAWINLCYVASYDTAAIRGWVASTAVTVLADILLRKPLSVLAIATFYTIRHYVRVPETVYVGKGRSQRPIGQL 180
            SHK+ELMPCMDAVN  YM+ + M K Y  P K  + H HVS    I++  LR +AAVKIQ +VRM+QA  R +RRQEV  W  P V  MRKRLTFRAY  L ++T  +AWINLCYVA YD  AIR W+A+T + VL DI+LRKPLSVL +AT  TIR   RVP TVY+GKG  QRPIG+ 
Sbjct:  725 SHKNELMPCMDAVNQRYMSQISMAKMYRPPPKVDHSHQHVSSWT-IDLCILRNTAAVKIQTLVRMYQARQRAVRRQEVVAWQSPHVRSMRKRLTFRAYTCLIVFTASVAWINLCYVALYDGPAIRNWIAATGIAVLVDIVLRKPLSVLVVATVNTIRDSARVPGTVYIGKGPFQRPIGKF 903
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BLAST of mRNA_L-elsbetiae_contig1610.4194.1 vs. uniprot
Match: D7FLP9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLP9_ECTSI)

HSP 1 Score: 138 bits (347), Expect = 6.010e-37
Identity = 73/125 (58.40%), Postives = 89/125 (71.20%), Query Frame = 0 
Query:    2 SHKSELMPCMDAVNHSYMATVHMVKHYGTPAK-PNDHNHVSIVAEINISALRESAAVKIQAVVRMHQAYSRTMRRQEVKVWHGPIVLDMRKRLTFRAYASLAIYTLVIAWINLCYVASYDTAAIR 125
            SHK+ELMPCMDAVN  YM+ + M K Y  P K  + H HVS  + I++  LR +AAVKIQ +VRM+QA+ R +RRQEV VW  P V  MR+RLTFRAYA L ++T  +AWINLCYV  YD  AIR
Sbjct:  151 SHKNELMPCMDAVNQRYMSQISMAKMYRPPPKVDHSHQHVSS-STIDLCILRNTAAVKIQTLVRMYQAHQRAVRRQEVVVWQCPRVKSMRRRLTFRAYACLIVFTASVAWINLCYVVMYDGPAIR 274
[Close]
BLAST of mRNA_L-elsbetiae_contig1610.4194.1 vs. uniprot
Match: D7G4X3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4X3_ECTSI)

HSP 1 Score: 136 bits (343), Expect = 6.810e-34
Identity = 72/125 (57.60%), Postives = 88/125 (70.40%), Query Frame = 0 
Query:    2 SHKSELMPCMDAVNHSYMATVHMVKHYGTPAK-PNDHNHVSIVAEINISALRESAAVKIQAVVRMHQAYSRTMRRQEVKVWHGPIVLDMRKRLTFRAYASLAIYTLVIAWINLCYVASYDTAAIR 125
            SHK+ELMPCMDAVN  YM+ + M K Y  P K  + H HVS  + I++  LR +AAVKIQ +VRM+QA+ R +RRQEV VW  P V  MR+RLTFRAY  L ++T  +AWINLCYV  YD  AIR
Sbjct: 1659 SHKNELMPCMDAVNQRYMSQISMAKMYRPPPKVDHSHQHVSS-STIDLCILRNTAAVKIQTLVRMYQAHQRAVRRQEVVVWQCPRVKSMRRRLTFRAYTCLIVFTASVAWINLCYVVMYDGPAIR 1782
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1610.4194.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JLT2_9PHAE7.620e-5759.44GPS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FLP9_ECTSI6.010e-3758.40Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G4X3_ECTSI6.810e-3457.60Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000048IQ motif, EF-hand binding sitePFAMPF00612IQcoord: 54..68
e-value: 0.0022
score: 17.6
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 52..79
score: 7.291
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 119..123
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 142..180
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 124..141
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 97..118
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..96
NoneNo IPR availableTMHMMTMhelixcoord: 97..119
NoneNo IPR availableTMHMMTMhelixcoord: 134..156

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1610contigL-elsbetiae_contig1610:19955..21487 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1610.4194.1mRNA_L-elsbetiae_contig1610.4194.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1610 18223..22780 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1610.4194.1 ID=prot_L-elsbetiae_contig1610.4194.1|Name=mRNA_L-elsbetiae_contig1610.4194.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=181bp
MSHKSELMPCMDAVNHSYMATVHMVKHYGTPAKPNDHNHVSIVAEINISA
LRESAAVKIQAVVRMHQAYSRTMRRQEVKVWHGPIVLDMRKRLTFRAYAS
LAIYTLVIAWINLCYVASYDTAAIRGWVASTAVTVLADILLRKPLSVLAI
ATFYTIRHYVRVPETVYVGKGRSQRPIGQL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000048IQ_motif_EF-hand-BS