prot_L-elsbetiae_contig1606.4174.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1606.4174.1
Unique Nameprot_L-elsbetiae_contig1606.4174.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length168
Homology
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BLAST of mRNA_L-elsbetiae_contig1606.4174.1 vs. uniprot
Match: D7FV65_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV65_ECTSI)

HSP 1 Score: 150 bits (380), Expect = 1.700e-43
Identity = 84/134 (62.69%), Postives = 101/134 (75.37%), Query Frame = 0 
Query:    1 MDIVNHLLASALESLREGEVEAAEAGFGEAASACCQAYGEIDVVTARTLAHLARVSSLRGKKEFAIQMYEKILRIHEALPEPLSYDHAIALSELAEIREESGSHEEADTLRRRADEIVNELSYQVQQASATSAG 134
            M+IVN LLA+AL  L++G  E AE  F +A SAC  A+GE D+VTARTLAHLARV  L+GK + AIQMYE+ILRIHEALPEPL+ DHA+AL ELA IREE GS   AD LRRRAD I+ EL+ + Q A ++  G
Sbjct:    1 MEIVNPLLANALGVLKQGSTEIAEKEFTKAVSACLTAFGETDIVTARTLAHLARVCRLQGKVDVAIQMYERILRIHEALPEPLNSDHAVALGELAAIREEGGSQGSADILRRRADVIMVELAARAQTAESSEDG 134
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1606.4174.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FV65_ECTSI1.700e-4362.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 2..165
e-value: 2.5E-13
score: 51.7
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 5..120

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1606contigL-elsbetiae_contig1606:1278..2958 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1606.4174.1mRNA_L-elsbetiae_contig1606.4174.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1606 1047..3014 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1606.4174.1 ID=prot_L-elsbetiae_contig1606.4174.1|Name=mRNA_L-elsbetiae_contig1606.4174.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=168bp
MDIVNHLLASALESLREGEVEAAEAGFGEAASACCQAYGEIDVVTARTLA
HLARVSSLRGKKEFAIQMYEKILRIHEALPEPLSYDHAIALSELAEIREE
SGSHEEADTLRRRADEIVNELSYQVQQASATSAGRESSDDSSDESDDDDD
DATESSSSERSEDHPNS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf