prot_L-elsbetiae_contig1606.4173.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1606.4173.1
Unique Nameprot_L-elsbetiae_contig1606.4173.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length122
Homology
BLAST of mRNA_L-elsbetiae_contig1606.4173.1 vs. uniprot
Match: D7FV66_ECTSI (Postmeiotic segregation increased 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV66_ECTSI)

HSP 1 Score: 223 bits (568), Expect = 7.520e-66
Identity = 111/120 (92.50%), Postives = 112/120 (93.33%), Query Frame = 0
Query:    2 VDDSQPTTKKLKITAIPFSKGTQFGVDDVHELASIVADTNTPGEMVRLPKARAMFASRACRSSIMIGKALDKGQMARVVAKMATIEQPWNCPHGRPTMRHLADVSKSLRAAAGLEPLLEA 121
            +DD QPTTKKLKITAIPFSKGTQFGVDDVHELASIVAD   PGEMVRLPKARAMFASRACRSS MIGKALDKGQMARVVAKMATIEQPWNCPHGRPTMRHLADVS SLR AAGLEPLL A
Sbjct:  788 IDDDQPTTKKLKITAIPFSKGTQFGVDDVHELASIVADNTNPGEMVRLPKARAMFASRACRSSFMIGKALDKGQMARVVAKMATIEQPWNCPHGRPTMRHLADVSASLRTAAGLEPLLTA 907          
BLAST of mRNA_L-elsbetiae_contig1606.4173.1 vs. uniprot
Match: A0A7S2RTW0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RTW0_9STRA)

HSP 1 Score: 140 bits (352), Expect = 1.140e-39
Identity = 66/109 (60.55%), Postives = 85/109 (77.98%), Query Frame = 0
Query:    2 VDDSQPTTKKLKITAIPFSKGTQFGVDDVHELASIVADTNTPGEM----VRLPKARAMFASRACRSSIMIGKALDKGQMARVVAKMATIEQPWNCPHGRPTMRHLADVS 106
            VD++ P T++LK+  +PFSK TQFGVDD+HELASI+AD  +        ++LPK R MFASRACRSS+MIG ALD   MA++V K+ +IEQPWNCPHGRPTMRHL +++
Sbjct:   74 VDEAAPPTQRLKLEKVPFSKTTQFGVDDIHELASIIADLPSDSAAGYSDLQLPKIRMMFASRACRSSVMIGTALDVPAMAKIVRKLESIEQPWNCPHGRPTMRHLTELT 182          
BLAST of mRNA_L-elsbetiae_contig1606.4173.1 vs. uniprot
Match: I2CR37_NANGC (MutL_C domain-containing protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CR37_NANGC)

HSP 1 Score: 135 bits (341), Expect = 1.280e-37
Identity = 65/116 (56.03%), Postives = 84/116 (72.41%), Query Frame = 0
Query:    1 QVDDSQPTTKKLKITAIPFSKGTQFGVDDVHELASIVADTNT----------PGEMVRLPKARAMFASRACRSSIMIGKALDKGQMARVVAKMATIEQPWNCPHGRPTMRHLADVS 106
            ++D      +++K+ ++P+SKG QFG+ D+HELAS++ D++           P   VRLPK RAMFASRACR SIMIGKAL + QM +VVA +A IEQPWNCPHGRPTMRHL D+S
Sbjct:  106 RLDPEAGPMERIKLLSLPYSKGIQFGLQDIHELASLLGDSSFCGGVEEGAEGPAPSVRLPKIRAMFASRACRMSIMIGKALTRSQMQKVVANLAEIEQPWNCPHGRPTMRHLVDLS 221          
BLAST of mRNA_L-elsbetiae_contig1606.4173.1 vs. uniprot
Match: A0A6A5AM97_9STRA (MutL_C domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AM97_9STRA)

HSP 1 Score: 133 bits (335), Expect = 4.910e-37
Identity = 62/110 (56.36%), Postives = 83/110 (75.45%), Query Frame = 0
Query:    1 QVDDSQPTTKKLKITAIPFSKGTQFGVDDVHELASIVADTN--TPGEMVRLPKARAMFASRACRSSIMIGKALDKGQMARVVAKMATIEQPWNCPHGRPTMRHLADVSKS 108
            QVD + P T+KL++ ++PFSK TQ+GVDDV EL S+V ++        +RLPK  AMFASRACRS++MIG AL +  M ++V ++A +EQPWNCPHGRPTMRHL D+S +
Sbjct:   84 QVDPAAPVTQKLRLISVPFSKHTQWGVDDVRELVSLVLESPHAAAAATIRLPKTLAMFASRACRSAVMIGTALKREDMQKIVVQLAELEQPWNCPHGRPTMRHLVDLSST 193          
BLAST of mRNA_L-elsbetiae_contig1606.4173.1 vs. uniprot
Match: A0A485LCN4_9STRA (Aste57867_19480 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LCN4_9STRA)

HSP 1 Score: 142 bits (358), Expect = 5.840e-37
Identity = 64/107 (59.81%), Postives = 84/107 (78.50%), Query Frame = 0
Query:    1 QVDDSQPTTKKLKITAIPFSKGTQFGVDDVHELASIVADTNTPGEMVRLPKARAMFASRACRSSIMIGKALDKGQMARVVAKMATIEQPWNCPHGRPTMRHLADVSK 107
            QVD+  P T+KLK+ ++PFSK TQ+GVDDV EL S++ +   P   +RLPK  AMFASRACRS++MIG AL K +M ++V ++A +EQPWNCPHGRPTMRHL D+S+
Sbjct:  657 QVDEGAPVTQKLKLISLPFSKHTQWGVDDVRELVSLLLENPHPPSTIRLPKTLAMFASRACRSAVMIGTALKKEEMQKIVGQLADLEQPWNCPHGRPTMRHLVDLSE 763          
BLAST of mRNA_L-elsbetiae_contig1606.4173.1 vs. uniprot
Match: A0A835YM26_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM26_9STRA)

HSP 1 Score: 142 bits (357), Expect = 8.240e-37
Identity = 75/147 (51.02%), Postives = 93/147 (63.27%), Query Frame = 0
Query:    2 VDDSQPTTKKLKITAIPFSKGTQFGVDDVHELASIVAD-----------------------------TNTPG--------EMVRLPKARAMFASRACRSSIMIGKALDKGQMARVVAKMATIEQPWNCPHGRPTMRHLADVSKSLRA 111
            V++ +P  ++L++TA+PFSKG QFG  DVHELASIVAD                             T+TP         + +RLPK  AMFA RACRSSIM+G ALD  QM R+VA +A +EQPWNCPHGRPT+RHLADVS+SLR+
Sbjct:  634 VEEGEPAGRRLRLTAVPFSKGAQFGARDVHELASIVADAHGSRARIRRNPHFYSHITRAPESHTYLHTHTPPPHTRARRLDEIRLPKLHAMFAMRACRSSIMVGTALDAAQMGRLVAALAGVEQPWNCPHGRPTLRHLADVSRSLRS 780          
BLAST of mRNA_L-elsbetiae_contig1606.4173.1 vs. uniprot
Match: A0A024UUQ3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UUQ3_9STRA)

HSP 1 Score: 139 bits (351), Expect = 5.690e-36
Identity = 64/114 (56.14%), Postives = 87/114 (76.32%), Query Frame = 0
Query:    1 QVDDSQPTTKKLKITAIPFSKGTQFGVDDVHELASIVADTNTPGEMVRLPKARAMFASRACRSSIMIGKALDKGQMARVVAKMATIEQPWNCPHGRPTMRHLADVSKSLRAAAG 114
            QVD S   T+KLK+ ++PFSK TQ+GVDDV EL S+V ++      +RLPK  AMFASRACRS++MIG AL + +M +++ ++A +EQPWNCPHGRPTMRHL D+S +L++  G
Sbjct:  713 QVDPSAAATQKLKLISVPFSKHTQWGVDDVRELVSLVLESPHAASTIRLPKTLAMFASRACRSAVMIGTALKRDEMQKILLQLAELEQPWNCPHGRPTMRHLVDLSCTLQSQKG 826          
BLAST of mRNA_L-elsbetiae_contig1606.4173.1 vs. uniprot
Match: A0A8K1C3K6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C3K6_PYTOL)

HSP 1 Score: 137 bits (346), Expect = 2.630e-35
Identity = 63/106 (59.43%), Postives = 81/106 (76.42%), Query Frame = 0
Query:    2 VDDSQPTTKKLKITAIPFSKGTQFGVDDVHELASIVADTNTPGEMVRLPKARAMFASRACRSSIMIGKALDKGQMARVVAKMATIEQPWNCPHGRPTMRHLADVSK 107
            V    P TKKL++ ++PFSK TQFGVDD+ ELAS++ +T      ++LPK  AM ASRACRSSIMIG AL K +M R+V  + T+EQPWNCPHGRPT+RHLAD+++
Sbjct:  684 VQKEAPPTKKLQLVSLPFSKQTQFGVDDIRELASLLMETPLQRSAIQLPKRMAMLASRACRSSIMIGTALHKEEMTRIVRNLTTLEQPWNCPHGRPTLRHLADLAQ 789          
BLAST of mRNA_L-elsbetiae_contig1606.4173.1 vs. uniprot
Match: A0A6G0XYA5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XYA5_9STRA)

HSP 1 Score: 137 bits (345), Expect = 3.530e-35
Identity = 65/108 (60.19%), Postives = 87/108 (80.56%), Query Frame = 0
Query:    1 QVDDSQPTTKKLKITAIPFSKGTQFGVDDVHELASIVADT-NTPGEMVRLPKARAMFASRACRSSIMIGKALDKGQMARVVAKMATIEQPWNCPHGRPTMRHLADVSK 107
            QVD+S   T+KLK+ ++PFSK TQ+GVDDV EL S++ ++ NTP   +RLPK  AMFASRACRS++MIG AL + +M ++V ++A +EQPWNCPHGRPTMRHL D+S+
Sbjct:  671 QVDESANVTEKLKLISVPFSKQTQWGVDDVRELVSLLLESPNTPAT-IRLPKTLAMFASRACRSAVMIGTALKRDEMQKIVLQLAELEQPWNCPHGRPTMRHLVDLSE 777          
BLAST of mRNA_L-elsbetiae_contig1606.4173.1 vs. uniprot
Match: A0A1V9ZL08_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZL08_9STRA)

HSP 1 Score: 137 bits (345), Expect = 3.910e-35
Identity = 62/105 (59.05%), Postives = 83/105 (79.05%), Query Frame = 0
Query:    2 VDDSQPTTKKLKITAIPFSKGTQFGVDDVHELASIVADTNTPGEMVRLPKARAMFASRACRSSIMIGKALDKGQMARVVAKMATIEQPWNCPHGRPTMRHLADVS 106
            VD S P T+KL++TA+PFSK T FGV DV ELAS++ +     + +RLPK  AMFASRACRS++MIG AL K +M ++V ++A+++QPWNCPHGRPTMRHL D++
Sbjct:  662 VDASAPATEKLRLTAVPFSKHTTFGVADVRELASLLLEAPHQAQTLRLPKVTAMFASRACRSAVMIGTALHKEEMLKIVTQLASLDQPWNCPHGRPTMRHLVDLN 766          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1606.4173.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FV66_ECTSI7.520e-6692.50Postmeiotic segregation increased 2 n=2 Tax=Ectoca... [more]
A0A7S2RTW0_9STRA1.140e-3960.55Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
I2CR37_NANGC1.280e-3756.03MutL_C domain-containing protein (Fragment) n=1 Ta... [more]
A0A6A5AM97_9STRA4.910e-3756.36MutL_C domain-containing protein (Fragment) n=1 Ta... [more]
A0A485LCN4_9STRA5.840e-3759.81Aste57867_19480 protein n=1 Tax=Aphanomyces stella... [more]
A0A835YM26_9STRA8.240e-3751.02Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A024UUQ3_9STRA5.690e-3656.14Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A8K1C3K6_PYTOL2.630e-3559.43Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A6G0XYA5_9STRA3.530e-3560.19Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A1V9ZL08_9STRA3.910e-3559.05Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014790MutL, C-terminal, dimerisationPFAMPF08676MutL_Ccoord: 6..71
e-value: 5.4E-6
score: 26.2
IPR042120MutL, C-terminal domain, dimerisation subdomainGENE3D2.30.42.20coord: 21..111
e-value: 2.7E-14
score: 54.9
NoneNo IPR availablePANTHERPTHR10073:SF52MISMATCH REPAIR ENDONUCLEASE PMS2-RELATEDcoord: 2..107
IPR038973DNA mismatch repair protein MutL/Mlh/PmsPANTHERPTHR10073DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTLcoord: 2..107
IPR037198MutL, C-terminal domain superfamilySUPERFAMILY118116DNA mismatch repair protein MutLcoord: 10..102

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1606contigL-elsbetiae_contig1606:440..805 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1606.4173.1mRNA_L-elsbetiae_contig1606.4173.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1606 440..805 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1606.4173.1 ID=prot_L-elsbetiae_contig1606.4173.1|Name=mRNA_L-elsbetiae_contig1606.4173.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=122bp
QVDDSQPTTKKLKITAIPFSKGTQFGVDDVHELASIVADTNTPGEMVRLP
KARAMFASRACRSSIMIGKALDKGQMARVVAKMATIEQPWNCPHGRPTMR
HLADVSKSLRAAAGLEPLLEA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014790MutL_C
IPR042120MutL_C_dimsub
IPR038973MutL/Mlh/Pms
IPR037198MutL_C_sf