prot_L-elsbetiae_contig1598.4121.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1598.4121.1
Unique Nameprot_L-elsbetiae_contig1598.4121.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length806
Homology
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BLAST of mRNA_L-elsbetiae_contig1598.4121.1 vs. uniprot
Match: D7FRN6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRN6_ECTSI)

HSP 1 Score: 80.1 bits (196), Expect = 2.610e-13
Identity = 66/157 (42.04%), Postives = 82/157 (52.23%), Query Frame = 0 
Query:  630 LGKSSREETFDVATARNGFSGIQPCDVGGAT--KVCRTPKPRGRWRRTSVSNGHWRRATDVKRGLAGPGLRGTGAA-ATTSNASFPRPAA-QGVHPFL--ASAGVRRGHGIVTGGVNEEEGARRDGMDHTPERRPIRPKAIKSPMYARRGRSEERNV 780
            +GK+  E+TFDVATARNGFSGI+     G +  K C TP PRGR  R     G+  R  D  +      +    AA AT  N S   P   +GVH FL    A  RR  G     + EE+   RD  D TPERRP RP AIKSP+  +R   ++R +
Sbjct:    1 MGKACTEDTFDVATARNGFSGIRSLQALGLSEEKGCSTPTPRGR--RCDAWAGN--RGGDRGQASHRAAMHVVSAAVATAENGSSSEPRCMRGVHAFLNPGEAATRRAAGSKF--LPEEDEKTRDWRDRTPERRPARPPAIKSPIGEKRVGQKDRTM 151
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1598.4121.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FRN6_ECTSI2.610e-1342.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 394..414
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 577..806
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..554
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 555..576
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 77..89

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1598contigL-elsbetiae_contig1598:12381..18819 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1598.4121.1mRNA_L-elsbetiae_contig1598.4121.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1598 12381..18955 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1598.4121.1 ID=prot_L-elsbetiae_contig1598.4121.1|Name=mRNA_L-elsbetiae_contig1598.4121.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=806bp
MAWQPRWQGSFGELCRDVNGTDRQVDGRVLHACEALGLCQGRFVPTILLA
KRLRGFSLAWHSFTLEECEAFVEVELDADEDGQVTVQDIFEFLHNWQLQA
QRAQRVSSDRSSRPSALVGGSTLASQRRREARRQTGLVATGKFPRGLREK
LLAAARQARSRGENVLRMLRVASPDGLEGDRNEKGSPSIGAEGACRFLRQ
LGVDCDSSATATRASGGSACALQGERACYLHQERTQELDTTRGPNHSREG
ISCLRPREHFHRGRSMYIPLSRQHCWGGCADKHNLNRAGTPSSYAGPWSA
GCEQSPTAGARPLSDARTTGSTKYTTARLVPEGSNPSDSPMLPSKSKWVV
HGEGDPRHHHKGVDSASEETKGVNDVDVDEDRRTSSGTGMSQRLRRAAED
LKRMQTEYKELQTQVYGRREERPSAPPEANAQPTDDHTGEEVGRFSYHTT
SRSPYHRPSSFQHGHRNLRHDDTNYFEKKQQSSPDFQGGGRKHGEKWETD
KEQTVKSSPIPLSSSGEETKNSPDAARYEASTAACGGLFVCGLVSAASVE
VSFRLITPMFSVVAAVDSSASPLLFYRRRQHAPRTSRYRRYARSTAEEIS
SAGARAGVSGWPRHGPDTCRCRALLLLAALGKSSREETFDVATARNGFSG
IQPCDVGGATKVCRTPKPRGRWRRTSVSNGHWRRATDVKRGLAGPGLRGT
GAAATTSNASFPRPAAQGVHPFLASAGVRRGHGIVTGGVNEEEGARRDGM
DHTPERRPIRPKAIKSPMYARRGRSEERNVWDRRSGRWARPRPHSGGCVR
SRSADH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018247EF_Hand_1_Ca_BS