prot_L-elsbetiae_contig1597.4114.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1597.4114.1
Unique Nameprot_L-elsbetiae_contig1597.4114.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length562
Homology
BLAST of mRNA_L-elsbetiae_contig1597.4114.1 vs. uniprot
Match: D7G1J8_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1J8_ECTSI)

HSP 1 Score: 521 bits (1342), Expect = 2.200e-176
Identity = 295/393 (75.06%), Postives = 331/393 (84.22%), Query Frame = 0
Query:   86 GDKSRSLAALGLSQSRGGGTFSGSYERLPSWVDEEAGAXXXXXXXXXXXXXXGSTFVPRSISVNSDXXXXXXXXXXAGMRSLSVNSDATPGTDLGAAALPAIKR-VPKANVRGAGAAGAGRGAGYAGHNWFLSTEDRRILKRRTILARFTPIVLLSSFVGDLDLITDWTFLHYGLAGQGYVIQRLALFFAIVGTVMWALSVTEFSLMSRLKNMWRGNLLSRLQHVGLGWQLLANVFLEDLPQFIITIITRPTSVTGVLNLCASGLSLCAKIVHGVSSQRAPSLSTQFKMIDQDPAVTRNLFRLRDEAKKEAKAAEKLVYLAWTNRCSTGEKKAAAVFQVLQMDPTFVNGDLEYMRADLFTGSRLYITSCALTGSIPRQLGDLSLLRTVVLARN 477
            GDKSR+LA LGLS S+GGGTFSGSY+RLPSW  +    XXXXXXXXXXX       VPRS+S+NSD        XX      +  +  +  T+LG    PAIKR  P    RG GA+G GRG+G  GH+WFLS +DR++LKRRTIL+R TPIVLLSSFVGDLDLITDWTFL YGLAGQG++I++LALFFAIVGTVMWALS TEFSLMS+LKNMW+GN LSRLQHVGLGWQLLANVFLED+PQFIIT+ITRPTSVTGVLNLCASGLSLCAKIVHG SSQRAPSLSTQFKMIDQDPAVTRNLF+LRDEAKK+AKAAEKLVYLAW NRCSTGE+KAAAVFQVLQMDPTFV GDLEYMRADLF+GSRLYIT+ +LTG IP Q+GD+++LR VVL+ N
Sbjct:   27 GDKSRALAGLGLSASKGGGTFSGSYQRLPSWGGDXXXXXXXXXXXXXXXDGGD---VPRSLSINSDGGGFGAGTXXXXXXXXAAATARS--TELG----PAIKRRAPGKTSRGLGASG-GRGSG--GHSWFLSAKDRQVLKRRTILSRITPIVLLSSFVGDLDLITDWTFLKYGLAGQGFLIRKLALFFAIVGTVMWALSTTEFSLMSKLKNMWKGNPLSRLQHVGLGWQLLANVFLEDVPQFIITVITRPTSVTGVLNLCASGLSLCAKIVHGYSSQRAPSLSTQFKMIDQDPAVTRNLFKLRDEAKKKAKAAEKLVYLAWANRCSTGEQKAAAVFQVLQMDPTFVGGDLEYMRADLFSGSRLYITASSLTGPIPSQVGDMTILRAVVLSGN 407          
BLAST of mRNA_L-elsbetiae_contig1597.4114.1 vs. uniprot
Match: A0A6H5JNU7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNU7_9PHAE)

HSP 1 Score: 432 bits (1112), Expect = 2.370e-145
Identity = 269/403 (66.75%), Postives = 303/403 (75.19%), Query Frame = 0
Query:    1 MMYLLFLGLLYKLQGGRFRSFVRAVMGYDVEADMTPTSPTTSGQGATTIKKPKVVAGYVSDGAASDCSAPGDFGIASATXXXXXVGDKSRSLAALGLSQSRGGGTFSGSYERLPSWVDEEAGAXXXXXXXXXXXXXXGSTFVPRSISVNSDXXXXXXXXXXAGMRSLSVNSD---ATPGTDLGAAALPAIKR-VPKANVRGAGAAGAGRGAGYAGHNWFLSTEDRRILKRRTILARFTPIVLLSSFVGDLDLITDWTFLHYGLAGQG-----------YVIQRLALFFAIVGTVMWALSVTEFSLMSRLKNMWRGNLLSRLQHVGLGWQLLANVFLEDLPQFIITIITRPTSVTGVLNLCASGLSLCAKIVHGVSSQRAPSLSTQFKMIDQDPAVTRNLFRLR 388
            MMYL+FL  LYKLQGGRFRSFVRAV+G+DVEADMTPTS   S +   +      VAGY+SDGAASD SAPG+   A+       +GDKSR+LA LGLS S+GGGTFSGSY+RLPSW     G  XXXXXXXXXXXXX    VPRS+S+NSD          AG R              T+LG    PAIKR  P    RG GA+GA RG+G  GH+W+LS +DR++LKRRTIL+R TPIVLLSSFVGDLDLITDW FL YGLAGQG           ++I++LALFFAIVGTVMWALS TEFSLMS+LKNMW+      LQHVGLGWQLLANVFLED+PQFIIT+ITRPTSVTGVLNLCASGLSLCAKI+HG+SSQRAPSLSTQFKMIDQDPAVTRNLF+LR
Sbjct:    1 MMYLVFLAFLYKLQGGRFRSFVRAVLGHDVEADMTPTSHNASDEKGVSKPVKPAVAGYISDGAASDVSAPGEPAAAA-------LGDKSRALAGLGLSASKGGGTFSGSYQRLPSW-----GGDXXXXXXXXXXXXXDGGDVPRSLSINSDGGGFE-----AGTRXXXXXXXXXATARSTELG----PAIKRRAPGKTSRGLGASGA-RGSG--GHSWYLSAKDRQVLKRRTILSRITPIVLLSSFVGDLDLITDWMFLKYGLAGQGENTKAEGCLQRFLIRKLALFFAIVGTVMWALSTTEFSLMSKLKNMWKV-----LQHVGLGWQLLANVFLEDVPQFIITVITRPTSVTGVLNLCASGLSLCAKIIHGISSQRAPSLSTQFKMIDQDPAVTRNLFKLR 374          
BLAST of mRNA_L-elsbetiae_contig1597.4114.1 vs. uniprot
Match: D7FK13_ECTSI (Hypothetical leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FK13_ECTSI)

HSP 1 Score: 178 bits (452), Expect = 1.070e-45
Identity = 111/261 (42.53%), Postives = 152/261 (58.24%), Query Frame = 0
Query:  217 STED-RRILKRRTILARFTPIVLLSSFVGDLDLITDWTFLHYGLAGQGYVIQRLALFFAIVGTVMWALSVTEFSLMSRLKNMW--RGNLLSRLQHVGLGWQLLANVFLEDLPQFIITIITRPTSVTGVLNLCASGLSLCAKIVHGVSSQRAPSLSTQFKMIDQDPAVTRNLFRLRDEAKKEAKAAEKLVYLA----WTNRCSTGEKKA----AAVFQVLQMDPTFVNGDLEYMRADLFTGSRLYITSCALTGSIPRQLGDL 466
            ++ED RR LKR  I  + TP+ +L+S V DLDL  DW FL  GL     ++  +A    +VGTVM+ L   EF  +S     W  RG  LS LQHV LGWQLL NV +ED+PQ +IT +T PTSV GVLN+  +G +L AK+  G +++    +S+Q +MID DP V ++L   R +A++ A  A  L  L       N     E+ +    A  FQV+Q+DP F+NG+L Y+R  L   SRL +    L GS+P  LGD+
Sbjct:  117 NSEDLRRTLKRSAIWEKVTPLTVLTSVVSDLDLFADWYFLQEGLEDAQELVADVAFVLTVVGTVMYVLLTLEFHPVSEAWT-WCRRGRALSPLQHVPLGWQLLLNVVVEDIPQLVITWVTSPTSVAGVLNIATAGFALLAKMAEGFATRTDLPMSSQLRMIDTDPGVVQHLLNARHKAEELAANAASLAVLVNRFGAENAAMPTERNSKRLLATAFQVMQVDPGFLNGELGYIREKLEV-SRLNLGRFGLKGSLPPSLGDV 375          
BLAST of mRNA_L-elsbetiae_contig1597.4114.1 vs. uniprot
Match: A0A6H5JP38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP38_9PHAE)

HSP 1 Score: 95.1 bits (235), Expect = 1.820e-20
Identity = 47/56 (83.93%), Postives = 51/56 (91.07%), Query Frame = 0
Query:  401 LVYLAWTNRCSTGEKKAAAVFQVLQMDPTFVNGDLEYMRADLFTGSRLYITSCALT 456
            +V L  T RCSTGE+KAAAVFQVLQMDPTFV GDLEYMRADLF+GSRLYITSC+LT
Sbjct:    1 MVPLHDTGRCSTGEQKAAAVFQVLQMDPTFVGGDLEYMRADLFSGSRLYITSCSLT 56          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1597.4114.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G1J8_ECTSI2.200e-17675.06Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5JNU7_9PHAE2.370e-14566.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FK13_ECTSI1.070e-4542.53Hypothetical leucine rich repeat protein n=2 Tax=E... [more]
A0A6H5JP38_9PHAE1.820e-2083.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 432..560
e-value: 3.5E-32
score: 113.3
NoneNo IPR availablePANTHERPTHR46662:SF3LEUCINE-RICH REPEAT (LRR) FAMILY PROTEINcoord: 447..555
NoneNo IPR availablePANTHERPTHR46662FAMILY NOT NAMEDcoord: 447..555
NoneNo IPR availablePANTHERPTHR46662:SF3LEUCINE-RICH REPEAT (LRR) FAMILY PROTEINcoord: 441..503
NoneNo IPR availablePANTHERPTHR46662FAMILY NOT NAMEDcoord: 441..503
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 250..268
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 291..561
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 229..249
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 269..290
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..228
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..15
score: 0.529
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 446..554
NoneNo IPR availableTMHMMTMhelixcoord: 269..291

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1597contigL-elsbetiae_contig1597:204..11052 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1597.4114.1mRNA_L-elsbetiae_contig1597.4114.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1597 204..14204 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1597.4114.1 ID=prot_L-elsbetiae_contig1597.4114.1|Name=mRNA_L-elsbetiae_contig1597.4114.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=562bp
MMYLLFLGLLYKLQGGRFRSFVRAVMGYDVEADMTPTSPTTSGQGATTIK
KPKVVAGYVSDGAASDCSAPGDFGIASATATATAVGDKSRSLAALGLSQS
RGGGTFSGSYERLPSWVDEEAGAAAGGGGGGGGGGGSGSTFVPRSISVNS
DGGGYGAGAGAAGMRSLSVNSDATPGTDLGAAALPAIKRVPKANVRGAGA
AGAGRGAGYAGHNWFLSTEDRRILKRRTILARFTPIVLLSSFVGDLDLIT
DWTFLHYGLAGQGYVIQRLALFFAIVGTVMWALSVTEFSLMSRLKNMWRG
NLLSRLQHVGLGWQLLANVFLEDLPQFIITIITRPTSVTGVLNLCASGLS
LCAKIVHGVSSQRAPSLSTQFKMIDQDPAVTRNLFRLRDEAKKEAKAAEK
LVYLAWTNRCSTGEKKAAAVFQVLQMDPTFVNGDLEYMRADLFTGSRLYI
TSCALTGSIPRQLGDLSLLRTVVLARNQLSGPIPPELAKLTNITVLDLSE
NILSGPIPKELARLGSLTVLNLSTNALTGPIPVELSGLKLLTKMTLAGNR
LTGERLASVVR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf