prot_L-elsbetiae_contig1578.4028.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1578.4028.1
Unique Nameprot_L-elsbetiae_contig1578.4028.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length476
Homology
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BLAST of mRNA_L-elsbetiae_contig1578.4028.1 vs. uniprot
Match: A0A6H5L1V9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1V9_9PHAE)

HSP 1 Score: 58.5 bits (140), Expect = 1.450e-5
Identity = 30/63 (47.62%), Postives = 44/63 (69.84%), Query Frame = 0 
Query:   13 SSRVSLVSARRLTWELPVEVLLQNAATELWSRVEFLQISDMTLSTETLSSIVWPKELKQLVLD 75
            S+RV  V A  LTW  P E  L +A++ELW+R+E LQ+  ++L T  L S+VWP+ L++LV+D
Sbjct:   77 STRVPAVQAVGLTWARPTESPLGSASSELWTRLESLQLQ-VSLCTANLDSVVWPQGLQRLVMD 138
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1578.4028.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L1V9_9PHAE1.450e-547.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008615FNIPPFAMPF05725FNIPcoord: 275..317
e-value: 4.0E-6
score: 26.9
coord: 407..449
e-value: 1.5E-5
score: 25.1
coord: 319..360
e-value: 1.5E-6
score: 28.3
coord: 155..186
e-value: 9.4E-5
score: 22.5
coord: 189..232
e-value: 3.5E-7
score: 30.3
coord: 363..404
e-value: 9.3E-7
score: 28.9
coord: 123..150
e-value: 2.0E-4
score: 21.4
NoneNo IPR availablePANTHERPTHR32134:SF114INACTIVE SERINE/THREONINE-PROTEIN KINASE FNKC-RELATEDcoord: 89..310
NoneNo IPR availablePANTHERPTHR32134:SF114INACTIVE SERINE/THREONINE-PROTEIN KINASE FNKC-RELATEDcoord: 306..470
coord: 198..426
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 306..470
coord: 89..310
coord: 198..426
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 158..450

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1578contigL-elsbetiae_contig1578:17700..19127 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1578.4028.1mRNA_L-elsbetiae_contig1578.4028.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1578 17498..20188 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1578.4028.1 ID=prot_L-elsbetiae_contig1578.4028.1|Name=mRNA_L-elsbetiae_contig1578.4028.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=476bp
MPPGFLGSKVRISSRVSLVSARRLTWELPVEVLLQNAATELWSRVEFLQI
SDMTLSTETLSSIVWPKELKQLVLDADLRGATMSGVAWPPRLQQLSVRGR
FNQPIAEAAWPASLQQLSFGLKFNQPIVGVTWPPLLQRLLFGRDFNQPIA
GVLWPSSLQQLSFEDRFNQPLAGVVWPDSLQQLSFGMEFSRPIKGVVWPV
SLQQLSFGRDFNQSINGVVWPPSLLQLSFGGFDRSITGILWPNSIRKLTF
QYYTQPIAGVVWPESLQELSFGGRFNRPIADAVWPDSLAKLSLGMEFNQP
IDEVVWPPSLRQVSFGQYFNKPIISVVWPDSLQRLSFEDRFNQPVTGAAW
PDSLQQLSFGAEFNQPIGGVLWPRSLQRLSFGRCFNQPVIELKLPASVQT
LSFGHRFNQPVIGVEWPASLQQFSFGLDFNQPVAGVSWPASLKNLSFGRC
FKQPVAGVVWPASLRKLTRGETSLM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008615FNIP