prot_L-elsbetiae_contig15766.4023.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig15766.4023.1
Unique Name	prot_L-elsbetiae_contig15766.4023.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	505

Homology

[Close]

BLAST of mRNA_L-elsbetiae_contig15766.4023.1 vs. uniprot
Match: A0A6H5KIY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIY6_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 5.700e-15
Identity = 64/164 (39.02%), Postives = 72/164 (43.90%), Query Frame = 0

Query:    5 FLSQGKYEEAEPLYKRSLAIDEKVYGPDHPEVATDLNNWAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAPVAYTTPLLPTXXXXXXXXXXXXXXXXXXXXALSTRKWLRGSTTGQRSTTGRPLYARCQAIDEKVLGPEHPSLATTLNNRAALLEKQ 168
            F+ QGKY+EAEPLYKRSLAIDEKVYGPDHP+VAT LNNW                                       +A TT LLP                                  G+    G PLY R  AI EKV GP+HP +A +LNNRA LL  Q
Sbjct:  348 FMFQGKYDEAEPLYKRSLAIDEKVYGPDHPDVATALNNWVRLLSICSSALKYL-------------------------LALTT-LLPVVPFLIFQ--------------------------GKYDQAG-PLYDRSLAILEKVHGPDHPDVAQSLNNRAELLRAQ 458

[Close]

BLAST of mRNA_L-elsbetiae_contig15766.4023.1 vs. uniprot
Match: D7G180_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G180_ECTSI)

HSP 1 Score: 82.8 bits (203), Expect = 7.070e-14
Identity = 61/163 (37.42%), Postives = 72/163 (44.17%), Query Frame = 0

Query:    7 SQGKYEEAEPLYKRSLAIDEKVYGPDHPEVATDLNNWAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAPVAYTTPLLPTXXXXXXXXXXXXXXXXXXXXALSTRKWLRGSTTGQ-RSTTGRPLYARCQAIDEKVLGPEHPSLATTLNNRAALLEKQ 168
            SQGK+EEAEPLY+RSLAIDE+VYGPDHPEVATDLNN A                                            LL T                     +     LR     Q +     PL+ R  AIDE+V GP+HP++AT L+N A LLE Q
Sbjct:   80 SQGKHEEAEPLYRRSLAIDEEVYGPDHPEVATDLNNLAG-------------------------------------------LLETQIMTSVVRQSHSVNSHEPSTDVLG---LRQPDVAQGKYEEAEPLHRRSLAIDEEVYGPDHPNVATGLSNLAGLLESQ 196

[Close]

BLAST of mRNA_L-elsbetiae_contig15766.4023.1 vs. uniprot
Match: A0A6H5K5H9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5H9_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 1.170e-13
Identity = 91/163 (55.83%), Postives = 97/163 (59.51%), Query Frame = 0

Query:    8 QGKYEEAEPLYKRSLAIDEKVYGPDHPEVATDLNNWAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAPVAYTTPLLPTXXXXXXXXXXXXXXXXXXXXALSTRK---WLRGSTTGQRS-TTGRPLYARCQAIDEKVLGPEHPSLATTLNNRAALLE 166
            QGKYEEAEPLY  SLAIDEKVYGPDH EVA DLNN A      XXXXXXXXXXXXXXXXXXXXXXXXXXXXX         L                       A S R    WL      Q +    +PLY R QAI +KVLGP+HP +AT LNNRA LL+
Sbjct:   87 QGKYEEAEPLYMLSLAIDEKVYGPDHLEVAEDLNNCAGLLSIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL----ESQALNKRVGVEGKCLCLFATSYRPHFVWLNYEYICQGNYAEAKPLYERSQAIRKKVLGPDHPDVATVLNNRAGLLK 245

[Close]

BLAST of mRNA_L-elsbetiae_contig15766.4023.1 vs. uniprot
Match: A0A6H5LI51_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LI51_9PHAE)

HSP 1 Score: 80.1 bits (196), Expect = 1.030e-12
Identity = 57/161 (35.40%), Postives = 64/161 (39.75%), Query Frame = 0

Query:    8 QGKYEEAEPLYKRSLAIDEKVYGPDHPEVATDLNNWAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAPVAYTTPLLPTXXXXXXXXXXXXXXXXXXXXALSTRKWLRGSTTGQRSTTGRPLYARCQAIDEKVLGPEHPSLATTLNNRAALLEKQ 168
            QGK+ EAE LYKRSL+IDEKVYGPDHPEVA DLNN A                                           P  P                          +  + +          PLY R  AIDEKV GP+HP +AT LNN AAL E Q
Sbjct:    6 QGKFHEAESLYKRSLSIDEKVYGPDHPEVAADLNNMAVLMESQARRWGSSDKFLGSTSGKCVEAVPLHRQSLGIREKTLGPEHPDVAESLNNLAGVLRSQASVNPVFEILRNFQDA---------EPLYERSLAIDEKVYGPDHPEVATDLNNWAALYEVQ 157

[Close]

BLAST of mRNA_L-elsbetiae_contig15766.4023.1 vs. uniprot
Match: A0A6H5K3K8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3K8_9PHAE)

HSP 1 Score: 70.1 bits (170), Expect = 1.260e-11
Identity = 34/41 (82.93%), Postives = 37/41 (90.24%), Query Frame = 0

Query:  413 IQGKFSEAEPLYERSQAIREKVLGPEHPNVASSLNNRAGLL 453
            IQGK+ EAEPLYERSQAI+EKVLG EHP+VASSLNNR  LL
Sbjct:   17 IQGKYMEAEPLYERSQAIQEKVLGLEHPDVASSLNNRVELL 57

[Close]

BLAST of mRNA_L-elsbetiae_contig15766.4023.1 vs. uniprot
Match: A0A6H5KWM2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWM2_9PHAE)

HSP 1 Score: 73.9 bits (180), Expect = 1.020e-10
Identity = 89/162 (54.94%), Postives = 98/162 (60.49%), Query Frame = 0

Query:    4 LFLSQGKYEEAEPLYKRSLAIDEKVYGPDHPEVATDLNNWAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAPVAYTTPLLPTXXXXXXXXXXXXXXXXXXXXALSTRKWLRGSTTGQRSTTGRPLYARCQAIDEKVLGPEHPSLATTLNNRAALL 165
            L  +QGK  EAE LYKRSLAIDEKVYGP HPEVA DLNNW XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                 +      ++G+           LY R  AI EKVLGP+HP++A +LNNRA LL
Sbjct:   12 LLKAQGKLAEAESLYKRSLAIDEKVYGPHHPEVAKDLNNWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAQNVPPGGVVEHSFIRLPYSAHSFHPLHHIQGNYD-----QAGMLYKRSLAIREKVLGPDHPNVAQSLNNRAGLL 168

[Close]

BLAST of mRNA_L-elsbetiae_contig15766.4023.1 vs. uniprot
Match: A0A6H5JJK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJK0_9PHAE)

HSP 1 Score: 73.6 bits (179), Expect = 5.480e-10
Identity = 115/185 (62.16%), Postives = 119/185 (64.32%), Query Frame = 0

Query:    8 QGKYEEAEPLYKRSLAIDEKVYGPDHPEVATDLNNWAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAPVAYTTPLLPTXXXXXXXXXXXXXXXXXXXXALSTRK--------WLRG--STTGQ--------------RSTTGRPLYARCQAIDEKVLGPEHPSLATTLNNRAALLEKQ 168
            QGKYEEA PLY+RSLAI EKV GPDHP+VA  LNN A  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX             XXXXXXXXXXXXXXXXXXXX              W     ST  Q              + T   PLY RCQAI EK LGPEHP +ATTLNNRA LLE Q
Sbjct:  798 QGKYEEAGPLYERSLAIREKVLGPDHPDVAQSLNNRALLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWAXATPSTVPQLKLLLYCAVNCIKGKYTDAEPLYERCQAIYEKRLGPEHPYVATTLNNRAGLLEAQ 982

[Close]

BLAST of mRNA_L-elsbetiae_contig15766.4023.1 vs. uniprot
Match: A0A6H5L226_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L226_9PHAE)

HSP 1 Score: 72.4 bits (176), Expect = 8.100e-10
Identity = 37/52 (71.15%), Postives = 43/52 (82.69%), Query Frame = 0

Query:  402 LKHKLVTLRTYIQGKFSEAEPLYERSQAIREKVLGPEHPNVASSLNNRAGLL 453
            LK + +T  T +QGK +EAEPLYERSQAIREKVLGP+HP+VA  LNNRA LL
Sbjct:  355 LKFRSIT-DTAVQGKHAEAEPLYERSQAIREKVLGPKHPDVAEVLNNRATLL 405

[Close]

BLAST of mRNA_L-elsbetiae_contig15766.4023.1 vs. uniprot
Match: A0A6H5K4D0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4D0_9PHAE)

HSP 1 Score: 72.8 bits (177), Expect = 1.020e-9
Identity = 57/166 (34.34%), Postives = 66/166 (39.76%), Query Frame = 0

Query:    4 LFLSQGKYEEAEPLYKRSLAIDEKVYGPDHPEVATDLNNWAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAPVAYTTPLLPTXXXXXXXXXXXXXXXXXXXXALSTRKWLRGSTTGQRSTTGRPLYARCQAIDEKVLGPEHPSLATTLNNRAALLEKQG 169
            L  +QG Y+EA  LY+RSLAI EK  GPDHP+VA  LNNWA                                            LL                      AL+ R  L     G     G+ LY R  AI EK LGP+HP +A +LNN A LLE QG
Sbjct:  423 LLKAQGNYDEAGKLYERSLAIREKALGPDHPDVAQSLNNWA--------------------------------------------LLLEAQVRAIRIPGSFLWYPIDSEALNNRV-LFLKAQGNYDEAGK-LYERSLAISEKALGPDHPDVAQSLNNWALLLESQG 542

[Close]

BLAST of mRNA_L-elsbetiae_contig15766.4023.1 vs. uniprot
Match: A7C642_9GAMM (TPR repeat protein n=1 Tax=Beggiatoa sp. PS TaxID=422289 RepID=A7C642_9GAMM)

HSP 1 Score: 68.2 bits (165), Expect = 1.020e-9
Identity = 30/41 (73.17%), Postives = 38/41 (92.68%), Query Frame = 0

Query:    4 LFLSQGKYEEAEPLYKRSLAIDEKVYGPDHPEVATDLNNWA 44
            L  +QG+Y++A+PLY+R+LAIDEKVYGP+HPEVATDLNN A
Sbjct:    4 LHRTQGEYDQAKPLYERALAIDEKVYGPNHPEVATDLNNLA 44

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig15766.4023.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig15766.4023.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KIY6_9PHAE	5.700e-15	39.02	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7G180_ECTSI	7.070e-14	37.42	TPR repeat-containing protein n=1 Tax=Ectocarpus s...	[more]
A0A6H5K5H9_9PHAE	1.170e-13	55.83	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5LI51_9PHAE	1.030e-12	35.40	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K3K8_9PHAE	1.260e-11	82.93	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KWM2_9PHAE	1.020e-10	54.94	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JJK0_9PHAE	5.480e-10	62.16	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5L226_9PHAE	8.100e-10	71.15	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K4D0_9PHAE	1.020e-9	34.34	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A7C642_9GAMM	1.020e-9	73.17	TPR repeat protein n=1 Tax=Beggiatoa sp. PS TaxID=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002151	Kinesin light chain	PRINTS	PR00381	KINESINLIGHT	coord: 235..252 score: 43.89 coord: 170..188 score: 30.0 coord: 278..298 score: 40.0 coord: 312..333 score: 41.82
IPR019734	Tetratricopeptide repeat	SMART	SM00028	tpr_5	coord: 155..188 e-value: 0.011 score: 25.0 coord: 3..28 e-value: 240.0 score: 2.8 coord: 197..230 e-value: 0.0095 score: 25.1 coord: 443..476 e-value: 0.018 score: 24.2 coord: 280..312 e-value: 25.0 score: 11.5 coord: 321..356 e-value: 320.0 score: 1.7
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 1..28 score: 6.077
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 197..230 score: 7.051
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 155..188 score: 7.08
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 443..476 score: 8.142
None	No IPR available	PFAM	PF13374	TPR_10	coord: 43..71 e-value: 8.2E-8 score: 31.9 coord: 93..115 e-value: 0.011 score: 15.5
None	No IPR available	PFAM	PF13424	TPR_12	coord: 243..307 e-value: 1.6E-16 score: 60.4 coord: 335..377 e-value: 9.0E-10 score: 38.7 coord: 6..42 e-value: 9.2E-8 score: 32.3 coord: 412..474 e-value: 2.7E-15 score: 56.4 coord: 155..229 e-value: 8.1E-20 score: 70.9
None	No IPR available	PANTHER	PTHR45783	FAMILY NOT NAMED	coord: 180..305 coord: 133..194 coord: 252..376 coord: 414..486 coord: 5..79 coord: 307..392 coord: 45..114
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10		coord: 123..248 e-value: 2.0E-42 score: 147.2
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10		coord: 2..115 e-value: 1.2E-30 score: 108.5 coord: 397..491 e-value: 9.2E-29 score: 102.4 coord: 249..393 e-value: 3.9E-46 score: 159.4
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 149..298
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 251..473
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 5..112
IPR013026	Tetratricopeptide repeat-containing domain	PROSITE	PS50293	TPR_REGION	coord: 443..476 score: 9.631
IPR013026	Tetratricopeptide repeat-containing domain	PROSITE	PS50293	TPR_REGION	coord: 155..230 score: 11.046
IPR013026	Tetratricopeptide repeat-containing domain	PROSITE	PS50293	TPR_REGION	coord: 1..28 score: 9.362

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig15766	contig	L-elsbetiae_contig15766:839..3922 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig15766.4023.1	mRNA_L-elsbetiae_contig15766.4023.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig15766 839..3922 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig15766.4023.1 ID=prot_L-elsbetiae_contig15766.4023.1|Name=mRNA_L-elsbetiae_contig15766.4023.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=505bp
VNQLFLSQGKYEEAEPLYKRSLAIDEKVYGPDHPEVATDLNNWAQGKYDQ
AEPLYEHAIAIWEASLGIDHPQVATGLNNRAPVAYTTPLLPTQGKYDEAA
PLYLRAIRIWETALSTRKWLRGSTTGQRSTTGRPLYARCQAIDEKVLGPE
HPSLATTLNNRAALLEKQGKYDDAEPLYVRAIAIGDKALGPDHPDLAVWL
NNRAGLLKSQGKYEEAEPLYKRSLAIDEKVYGPDHPEVATDLNNWAFVEH
FGKYEEAGPLYERSLAIREKVYGPDHPAVATALNNRAQLLRNGKYSEAEP
LYERCQAIEEKVLGPEHPSLAITLNNRAGLLRKCSSGKYEEAGPLYERSL
AIREKVYGPDHPAVATVLNNRAGLLQSQVRAEFSGVVVERLFLRNYHFNL
TLKHKLVTLRTYIQGKFSEAEPLYERSQAIREKVLGPEHPNVASSLNNRA
GLLYKQGKYDEADPLYLRAIEIGEKTLGPDHPSVATRLKKAWLFSKCSRV
GLLE*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002151	Kinesin_light
IPR019734	TPR_repeat
IPR011990	TPR-like_helical_dom_sf
IPR013026	TPR-contain_dom