prot_L-elsbetiae_contig1576.4019.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig1576.4019.1
Unique Name	prot_L-elsbetiae_contig1576.4019.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	90

Homology

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BLAST of mRNA_L-elsbetiae_contig1576.4019.1 vs. uniprot
Match: D7G1V3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1V3_ECTSI)

HSP 1 Score: 61.2 bits (147), Expect = 5.380e-10
Identity = 40/94 (42.55%), Postives = 50/94 (53.19%), Query Frame = 0

Query:    1 MFLIYYGYYELWEVFIPTTFSMVIMLSLVGLKVYYEEFSPRCEAAA-----VVGEDTGSRSETRSKRDRVARAELIGGAKDASSTNDAQPLMSS 89
            MFL YYGYYELWEVF P   SM   + L+ LK+  EEF  R  AA      VVG+ +G                   G + A++++DAQPLMSS
Sbjct:   52 MFLAYYGYYELWEVFFPALLSMSFAILLLALKIRLEEFPLRPRAAVPGASVVVGDTSGD------------------GERMANTSSDAQPLMSS 127

[Close]

BLAST of mRNA_L-elsbetiae_contig1576.4019.1 vs. uniprot
Match: A0A6H5KU65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU65_9PHAE)

HSP 1 Score: 58.5 bits (140), Expect = 6.000e-9
Identity = 37/94 (39.36%), Postives = 50/94 (53.19%), Query Frame = 0

Query:    1 MFLIYYGYYELWEVFIPTTFSMVIMLSLVGLKVYYEEFSPRCEAAAV-----VGEDTGSRSETRSKRDRVARAELIGGAKDASSTNDAQPLMSS 89
            MFL+YYGYYELWE+F P+  SM  ++ L+  K+  EEF  R  AAA      VG+  G                   G +  ++++DAQPLMSS
Sbjct:   52 MFLVYYGYYELWELFFPSLISMSFVILLLAAKIRMEEFPLRPRAAAAGASVAVGDTPGD------------------GERMTNTSSDAQPLMSS 127

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig1576.4019.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig1576.4019.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7G1V3_ECTSI	5.380e-10	42.55	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KU65_9PHAE	6.000e-9	39.36	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 32..89
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 12..31
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..11
None	No IPR available	TMHMM	TMhelix		coord: 15..34

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig1576	contig	L-elsbetiae_contig1576:12118..12387 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig1576.4019.1	mRNA_L-elsbetiae_contig1576.4019.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig1576 12048..13630 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig1576.4019.1 ID=prot_L-elsbetiae_contig1576.4019.1|Name=mRNA_L-elsbetiae_contig1576.4019.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=90bp
MFLIYYGYYELWEVFIPTTFSMVIMLSLVGLKVYYEEFSPRCEAAAVVGE
DTGSRSETRSKRDRVARAELIGGAKDASSTNDAQPLMSS*