prot_L-elsbetiae_contig15747.4013.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig15747.4013.1
Unique Nameprot_L-elsbetiae_contig15747.4013.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length124
Homology
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BLAST of mRNA_L-elsbetiae_contig15747.4013.1 vs. uniprot
Match: A0A6H5L0S5_9PHAE (Uncharacterized protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0S5_9PHAE)

HSP 1 Score: 62.8 bits (151), Expect = 1.430e-9
Identity = 33/97 (34.02%), Postives = 50/97 (51.55%), Query Frame = 0 
Query:   29 GDSSLLRKFVGGNKPPVSPRDPNKRTGWLRVVERSLFDEGLGYTVEEDARTGPVRVIS-DSRDDLLQLHPQTIVLDHMRAYNYISNSVTGTDLDERL 124
            G S L+    G   PP  P +P K   W R +   L  EGL  T++    TG V +I    R+ L ++H   +V  H+RA+ Y+  S +G+D++E L
Sbjct:   82 GGSQLMSGRFGTRNPPKHPNEPGKFMSWSRRMRTFLAVEGLEQTLDHQPPTGYVHIIGCPDRNYLNRIHGAPLVTAHLRAWGYLVESTSGSDIEETL 178
[Close]
BLAST of mRNA_L-elsbetiae_contig15747.4013.1 vs. uniprot
Match: A0A6H5L089_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L089_9PHAE)

HSP 1 Score: 62.8 bits (151), Expect = 5.690e-9
Identity = 33/97 (34.02%), Postives = 50/97 (51.55%), Query Frame = 0 
Query:   29 GDSSLLRKFVGGNKPPVSPRDPNKRTGWLRVVERSLFDEGLGYTVEEDARTGPVRVIS-DSRDDLLQLHPQTIVLDHMRAYNYISNSVTGTDLDERL 124
            G S L+    G   PP  P +P K   W R +   L  EGL  T++    TG V +I    R+ L ++H   +V  H+RA+ Y+  S +G+D++E L
Sbjct:  368 GGSQLMSGRFGTRNPPKHPNEPGKFMSWSRRMRTFLAVEGLEQTLDHQPPTGYVHIIGCPDRNYLNRIHGAPLVTAHLRAWGYLVESTSGSDIEETL 464
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15747.4013.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L0S5_9PHAE1.430e-934.02Uncharacterized protein (Fragment) n=2 Tax=Ectocar... [more]
A0A6H5L089_9PHAE5.690e-934.02Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig15747contigL-elsbetiae_contig15747:37..408 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig15747.4013.1mRNA_L-elsbetiae_contig15747.4013.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig15747 37..409 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig15747.4013.1 ID=prot_L-elsbetiae_contig15747.4013.1|Name=mRNA_L-elsbetiae_contig15747.4013.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=124bp
GASTAGGAVPAVGGAGMAGGMTNGGLGVGDSSLLRKFVGGNKPPVSPRDP
NKRTGWLRVVERSLFDEGLGYTVEEDARTGPVRVISDSRDDLLQLHPQTI
VLDHMRAYNYISNSVTGTDLDERL
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