prot_L-elsbetiae_contig15730.4004.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig15730.4004.1
Unique Nameprot_L-elsbetiae_contig15730.4004.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length61
Homology
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BLAST of mRNA_L-elsbetiae_contig15730.4004.1 vs. uniprot
Match: D8LQE4_ECTSI (WW domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQE4_ECTSI)

HSP 1 Score: 110 bits (275), Expect = 8.830e-27
Identity = 54/61 (88.52%), Postives = 56/61 (91.80%), Query Frame = 0 
Query:    1 MPAWLLTMQEDDGWRRTLIELAREHRQSALLRFVLKQLSDNGYHREIAAVISETDLFSVFN 61
            MPAWL  MQ+D GWRRTLIELAREHR SALLRFVLKQLSD GYHREIA+VISETDLFSVFN
Sbjct:  464 MPAWLTAMQDDTGWRRTLIELAREHRASALLRFVLKQLSDMGYHREIASVISETDLFSVFN 524
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BLAST of mRNA_L-elsbetiae_contig15730.4004.1 vs. uniprot
Match: A0A7S3YJY7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YJY7_HETAK)

HSP 1 Score: 52.4 bits (124), Expect = 4.220e-7
Identity = 26/59 (44.07%), Postives = 34/59 (57.63%), Query Frame = 0 
Query:    2 PAWLLTMQEDDGWRRTLIELAREHRQSALLRFVLKQLSDNGYHREIAAVISETDLFSVF 60
            P +L  M     WR  L+ L   H +SALL F  + LS+ G+H+EIAAV+S  D   VF
Sbjct:   56 PDFLAEMLRKKRWRHALLRLFNRHERSALLGFCARYLSEKGFHKEIAAVLSRPDDLGVF 114
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15730.4004.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LQE4_ECTSI8.830e-2788.52WW domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
A0A7S3YJY7_HETAK4.220e-744.07Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006942TH1 proteinPFAMPF04858TH1coord: 2..60
e-value: 2.9E-8
score: 32.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig15730contigL-elsbetiae_contig15730:92..274 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig15730.4004.1mRNA_L-elsbetiae_contig15730.4004.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig15730 92..274 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig15730.4004.1 ID=prot_L-elsbetiae_contig15730.4004.1|Name=mRNA_L-elsbetiae_contig15730.4004.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=61bp
MPAWLLTMQEDDGWRRTLIELAREHRQSALLRFVLKQLSDNGYHREIAAV
ISETDLFSVFN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006942TH1