prot_L-elsbetiae_contig1573.4003.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1573.4003.1
Unique Nameprot_L-elsbetiae_contig1573.4003.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length339
Homology
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BLAST of mRNA_L-elsbetiae_contig1573.4003.1 vs. uniprot
Match: D8LJL2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJL2_ECTSI)

HSP 1 Score: 207 bits (528), Expect = 6.800e-61
Identity = 133/215 (61.86%), Postives = 144/215 (66.98%), Query Frame = 0 
Query:  124 RGRVTSGAGTGAMRPAPKGAVGIGPPERHPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXGGRAAEVGTALRPAGAAPAAAAPVAKFDLAGFVKMLGGGLIVTKINRQGRAKVRTLFYDRRDGMLWWNERG-GRLYRSKGSGSLLSLGKEQPLPVASLVKVRMADELHEPFCFDEDVDKSFQLVFPTRTVDLVAKDAEEASLLARGFQELQASVSA 337
            RGR +SGAG  AMRPAPKGAVG+G        XXXX                       G R A V        AAPA A P   FDLAGF + LGGGLIVTKINRQGRAKVR LFYDR++ MLWWNE G G  +RS    SLLS+ KEQPL VASL+KV MAD+L EPFCFD DVDKSFQLVFP RTVDLVAKDAEEA+LLARGFQEL+ S  A
Sbjct:  154 RGRNSSGAGVEAMRPAPKGAVGMGKVGAXXXXXXXXGAGSRSQGGPSEYNSRNGSQSSSGSRPAAVA-------AAPAPAEPA--FDLAGFEEKLGGGLIVTKINRQGRAKVRALFYDRQERMLWWNEPGRGSPHRS----SLLSIKKEQPLAVASLIKVEMADQLDEPFCFDGDVDKSFQLVFPARTVDLVAKDAEEAALLARGFQELKMSACA 355
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1573.4003.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LJL2_ECTSI6.800e-6161.86Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1573contigL-elsbetiae_contig1573:18555..20874 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1573.4003.1mRNA_L-elsbetiae_contig1573.4003.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1573 18516..22036 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1573.4003.1 ID=prot_L-elsbetiae_contig1573.4003.1|Name=mRNA_L-elsbetiae_contig1573.4003.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=339bp
MADSNSATQKAAFASAPADHGGRHDERQRREKEEPEHHIEPMSMKPLTRG
SSGGGSTKPLSRGSSSGSGSNSSSSRRANSKSSSRTTASSSSSSSAPSAS
AGNASGGGKTGSGGGSSSSSSNSRGRVTSGAGTGAMRPAPKGAVGIGPPE
RHPAAGGGGDRSAGTTTTTHTSSRGSPYSSSSGGRAAEVGTALRPAGAAP
AAAAPVAKFDLAGFVKMLGGGLIVTKINRQGRAKVRTLFYDRRDGMLWWN
ERGGRLYRSKGSGSLLSLGKEQPLPVASLVKVRMADELHEPFCFDEDVDK
SFQLVFPTRTVDLVAKDAEEASLLARGFQELQASVSAG*
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