prot_L-elsbetiae_contig15713.3994.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig15713.3994.1
Unique Nameprot_L-elsbetiae_contig15713.3994.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length532
Homology
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BLAST of mRNA_L-elsbetiae_contig15713.3994.1 vs. uniprot
Match: D7FI73_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI73_ECTSI)

HSP 1 Score: 62.4 bits (150), Expect = 7.310e-7
Identity = 25/39 (64.10%), Postives = 32/39 (82.05%), Query Frame = 0 
Query:    3 SKCHHVGCTKQSRYGAAGSKKKEFCSEHKKDGMVNISNK 41
            S+C H  CTK+  YG AGSKK+EFCS+H +DGMVN++NK
Sbjct:    2 SQCGHANCTKRPTYGVAGSKKREFCSQHARDGMVNVNNK 40
[Close]
BLAST of mRNA_L-elsbetiae_contig15713.3994.1 vs. uniprot
Match: A0A6H5JT00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT00_9PHAE)

HSP 1 Score: 61.6 bits (148), Expect = 1.870e-6
Identity = 25/39 (64.10%), Postives = 32/39 (82.05%), Query Frame = 0 
Query:    3 SKCHHVGCTKQSRYGAAGSKKKEFCSEHKKDGMVNISNK 41
            S+C H  CTK+  YG AGSKK+EFCS+H +DGMVN++NK
Sbjct:   62 SQCGHENCTKRPTYGVAGSKKREFCSQHARDGMVNVNNK 100
[Close]
BLAST of mRNA_L-elsbetiae_contig15713.3994.1 vs. uniprot
Match: A0A6H5KW71_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW71_9PHAE)

HSP 1 Score: 56.6 bits (135), Expect = 7.080e-5
Identity = 24/41 (58.54%), Postives = 32/41 (78.05%), Query Frame = 0 
Query:    1 MPSKCHHVGCTKQSRYGAAGSKKKEFCSEHKKDGMVNISNK 41
            MP+ C H GC KQ +YG AG+KK+EFCS H+K GMV++ N+
Sbjct:    1 MPA-CGHAGCPKQPKYGVAGTKKREFCSGHRKAGMVDVVNR 40
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15713.3994.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FI73_ECTSI7.310e-764.10EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5JT00_9PHAE1.870e-664.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KW71_9PHAE7.080e-558.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig15713contigL-elsbetiae_contig15713:2272..3867 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig15713.3994.1mRNA_L-elsbetiae_contig15713.3994.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig15713 1930..3870 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig15713.3994.1 ID=prot_L-elsbetiae_contig15713.3994.1|Name=mRNA_L-elsbetiae_contig15713.3994.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=532bp
MPSKCHHVGCTKQSRYGAAGSKKKEFCSEHKKDGMVNISNKKCAHHGCTK
HPAFGAAGTKKPEFCSGHKRDGMVNVRDKRCTHHGCTMRASYGAARTKTA
EFCSKHKKDGMVDVLNKRCVHHGCTKHPNYGVAGTKTAEFCSGHKKDGMV
NVRAKTCTHHGCTTRPSFGAAGTETAEFCSGHKKDGMMNVLNKMCAHHGC
TKHPAFGVAGNKTPEFCSEHKKEGMMDVKNRKCAHHDCTKWPSYGVAGTK
TAEFCSEHKKEGMVDVLSKRCIHHGCTKHPVFGVAGTRTAEFCSKHKRDG
MVNVRAKACTHHGCTTRASYGAAGTETGEFCSGHKKDGMMNVRAKTCTHH
GCTTRASYGAAGTETAEFCCGHKKDGMVDVKNRKYAHHGCTNQSSHGIIG
TTKRKLCGQHAEGDMAHHTPSNYRSSGGARGDSDSKHDRDRVPVDDIGAA
HGAGAGQERKGRASSSEQTEVFSSKRARQAPVDPPAARHPSEKPIVEGPS
PEEDASVSERGNAAVKMEAGAFCIGRRGSWR*
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