prot_L-elsbetiae_contig1571.3990.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1571.3990.1
Unique Nameprot_L-elsbetiae_contig1571.3990.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length232
Homology
BLAST of mRNA_L-elsbetiae_contig1571.3990.1 vs. uniprot
Match: D7FZR3_ECTSI (Pentapeptide repeat n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZR3_ECTSI)

HSP 1 Score: 214 bits (545), Expect = 1.620e-66
Identity = 168/239 (70.29%), Postives = 176/239 (73.64%), Query Frame = 0
Query:    1 MKLLWCMFTLCVSGGNSFVSPFVPAPVSPSSTAAGRCRSQTLETRPRAAAPMAMSVSPG-------NNFRATVASWTLAAVLLAGVPLLGAPAPASAISGGGLDYAELNLTGKDFSNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTIFTNAVATGSYF-NSMDNVGDISGADFTDALIRKDVAKALCARPDAKGTNPTTGTDTRDSLLCDMF 231
            MKLLWC F L  SGG+SFVSPFVPA VS S+T AGR RSQ L+ R                         A VASWTLAAVL+AGVPLL  P+PA AISGGGLDYA LNLTG+D S G            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      GTI TNAVATGSYF N+M+NVGDISGADFTDALIRKDVAK LCARPDAKGTNPTTGTDTRDSLLCDMF
Sbjct:    1 MKLLWCFFALLTSGGDSFVSPFVPAAVS-SATTAGRGRSQPLDARXXXXXXXXXXXXXXXXXSEKRTGLGAAVASWTLAAVLVAGVPLLVNPSPAVAISGGGLDYAGLNLTGQDLSKGKYKSKDFSGSIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEADLEGTIMTNAVATGSYFGNNMNNVGDISGADFTDALIRKDVAKILCARPDAKGTNPTTGTDTRDSLLCDMF 238          
BLAST of mRNA_L-elsbetiae_contig1571.3990.1 vs. uniprot
Match: A0A6H5KFC5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFC5_9PHAE)

HSP 1 Score: 177 bits (450), Expect = 6.360e-53
Identity = 149/181 (82.32%), Postives = 156/181 (86.19%), Query Frame = 0
Query:   52 MAMSVSPGNNFRATVASWTLAAVLLAGVPLLGAPAPASAISGGGLDYAELNLTGKDFSNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTIFTNAVATGSYF-NSMDNVGDISGADFTDALIRKDVAKALCARPDAKGTNPTTGTDTRDSLLCDMF 231
            M+MS        A VASWTLAAVL+AGVPLL  P+P +AISGGGLDYA LNLTG+D SNG     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   GTI TNAVATGSYF N+M+NVGDISGADFTDALIRKDVAK LCARPDAKGTNPTTGTDTRDSLLCDMF
Sbjct:    1 MSMSSEQRTGLGAAVASWTLAAVLMAGVPLLVDPSPVAAISGGGLDYAGLNLTGQDLSNGKYKSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLEGTIMTNAVATGSYFGNNMNNVGDISGADFTDALIRKDVAKILCARPDAKGTNPTTGTDTRDSLLCDMF 181          
BLAST of mRNA_L-elsbetiae_contig1571.3990.1 vs. uniprot
Match: A0A7S2SQY3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQY3_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 2.820e-12
Identity = 31/50 (62.00%), Postives = 40/50 (80.00%), Query Frame = 0
Query:  179 NSMDNVGDISGADFTDALIRKDVAKALCARPDAKGTNPTTGTDTRDSLLC 228
            +++D  G+I GADFTD+++R+ + K LC RPDAKGTNP TG DTRDSL C
Sbjct:  188 STLDQAGNIEGADFTDSIMRETMQKKLCERPDAKGTNPKTGVDTRDSLFC 237          
BLAST of mRNA_L-elsbetiae_contig1571.3990.1 vs. uniprot
Match: K0TQX1_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TQX1_THAOC)

HSP 1 Score: 73.6 bits (179), Expect = 3.150e-12
Identity = 87/160 (54.37%), Postives = 96/160 (60.00%), Query Frame = 0
Query:   70 TLAAVLLAGVPLLGAPAPASAISGGGLDYAELNLTGKDFSNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTIFTNAVATGSYFN-SMDNVGDISGADFTDALIRKDVAKALCARPDAKGTNPTTGTDTRDSLLC 228
            +LA  L A    LG P    A+SGGG+DYA LNLT       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     X                G    N VA+GSYF  S+ +V  + G DFTDA I     K +C R D KGTNPTTG DTRDSL+C
Sbjct:   65 SLAPTLAAASIALG-PLACGAVSGGGMDYANLNLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVNADXSGADARGAAFEDTSMDGANLRNIVASGSYFGQSLLDVESLEGGDFTDAQIPPKTLKLVCDREDVKGTNPTTGADTRDSLMC 223          
BLAST of mRNA_L-elsbetiae_contig1571.3990.1 vs. uniprot
Match: A0A1E7ER21_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7ER21_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 6.250e-12
Identity = 32/63 (50.79%), Postives = 42/63 (66.67%), Query Frame = 0
Query:  167 IFTNAVATGSYFN-SMDNVGDISGADFTDALIRKDVAKALCARPDAKGTNPTTGTDTRDSLLC 228
            + TNA+A+G+YF+ ++     +   DFTDA I   +   LC RPD KGTNPTTG DTRDS +C
Sbjct:   65 VLTNAIASGAYFDQNLLEAKSVENVDFTDAQIPDKILPVLCERPDMKGTNPTTGVDTRDSAMC 127          
BLAST of mRNA_L-elsbetiae_contig1571.3990.1 vs. uniprot
Match: A0A7S2GAY7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GAY7_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 7.950e-11
Identity = 30/50 (60.00%), Postives = 38/50 (76.00%), Query Frame = 0
Query:  179 NSMDNVGDISGADFTDALIRKDVAKALCARPDAKGTNPTTGTDTRDSLLC 228
            +++D V  I GADFTDA++   + K +CA P AKGTNPTTG DTRDSL+C
Sbjct:  172 STLDEVASIEGADFTDAVMNTPLMKKMCALPTAKGTNPTTGVDTRDSLIC 221          
BLAST of mRNA_L-elsbetiae_contig1571.3990.1 vs. uniprot
Match: L1IGW1_GUITC (Uncharacterized protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IGW1_GUITC)

HSP 1 Score: 68.2 bits (165), Expect = 3.190e-10
Identity = 34/54 (62.96%), Postives = 38/54 (70.37%), Query Frame = 0
Query:  176 SYFN-SMDNVGDISGADFTDALIRKDVAKALCARPDAKGTNPTTGTDTRDSLLC 228
            SY N  +D V DISGADFTDAL+R D+   LC R DA GTNP T  DTR+SL C
Sbjct:  177 SYTNLGLDKVKDISGADFTDALVRPDILAKLCKRSDATGTNPVTKADTRESLGC 230          
BLAST of mRNA_L-elsbetiae_contig1571.3990.1 vs. uniprot
Match: A0A1D2ADL2_AUXPR (Uncharacterized protein n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D2ADL2_AUXPR)

HSP 1 Score: 67.4 bits (163), Expect = 3.210e-10
Identity = 38/64 (59.38%), Postives = 41/64 (64.06%), Query Frame = 0
Query:  165 GTIFTNAVATGSYFNSMDNVGDISGADFTDALIRKDVAKALCARPDAKGTNPTTGTDTRDSLLC 228
            GT+ TNA            V  I GADFTDALIRKDV  +LC    AKGTNPTTGTDTR+SL C
Sbjct:  135 GTLLTNA--------QWKRVASIEGADFTDALIRKDVEASLCRL--AKGTNPTTGTDTRESLHC 188          
BLAST of mRNA_L-elsbetiae_contig1571.3990.1 vs. uniprot
Match: A0A7S0AXB9_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AXB9_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 5.890e-10
Identity = 86/145 (59.31%), Postives = 97/145 (66.90%), Query Frame = 0
Query:   87 PASAISGGGLDYAELNLTGKDFSNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTIFTN--AVATGSYFN-SMDNVGDISGADFTDALIRKDVAKALCARPDAKGTNPTTGTDTRDSLLC 228
            PA A+SGGGLDYA L++TG+DFSN                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        AVA GSYF  S+ +V  +   DF+DA I       +C R D KGTNP TG DTR+SL+C
Sbjct:   83 PAGAVSGGGLDYANLDITGQDFSNEAKTYKGKDFSQVIAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVAVGSYFGQSLLDVKTMENGDFSDAQIPVKTLPLVCEREDVKGTNPVTGVDTRESLMC 227          
BLAST of mRNA_L-elsbetiae_contig1571.3990.1 vs. uniprot
Match: A0A7S4HSJ0_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HSJ0_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 6.050e-10
Identity = 32/62 (51.61%), Postives = 42/62 (67.74%), Query Frame = 0
Query:  170 NAVATGSYFNS---MDNVGDISGADFTDALIRKDVAKALCARPDAKGTNPTTGTDTRDSLLC 228
            NAV    Y +    +  V DI G+D+TD ++R+D  K LC+ P AKGTNPTTG DTR+SL+C
Sbjct:  193 NAVLREMYVSGATILTGVKDIEGSDWTDTMLRRDQTKYLCSHPTAKGTNPTTGVDTRESLMC 254          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1571.3990.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZR3_ECTSI1.620e-6670.29Pentapeptide repeat n=1 Tax=Ectocarpus siliculosus... [more]
A0A6H5KFC5_9PHAE6.360e-5382.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2SQY3_9STRA2.820e-1262.00Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
K0TQX1_THAOC3.150e-1254.38Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A1E7ER21_9STRA6.250e-1250.79Uncharacterized protein (Fragment) n=1 Tax=Fragila... [more]
A0A7S2GAY7_9STRA7.950e-1160.00Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
L1IGW1_GUITC3.190e-1062.96Uncharacterized protein (Fragment) n=1 Tax=Guillar... [more]
A0A1D2ADL2_AUXPR3.210e-1059.38Uncharacterized protein n=1 Tax=Auxenochlorella pr... [more]
A0A7S0AXB9_9STRA5.890e-1059.31Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A7S4HSJ0_9STRA6.050e-1051.61Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.160.20.100coord: 92..231
e-value: 2.1E-31
score: 110.1
NoneNo IPR availablePANTHERPTHR47200FAMILY NOT NAMEDcoord: 65..229
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..29
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..231
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..29
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..17
score: 0.666
NoneNo IPR availableSUPERFAMILY141571Pentapeptide repeat-likecoord: 95..195
IPR001646Pentapeptide repeatPFAMPF00805Pentapeptidecoord: 117..150
e-value: 1.7E-8
score: 33.9
coord: 152..179
e-value: 0.0072
score: 16.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1571contigL-elsbetiae_contig1571:11235..15143 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1571.3990.1mRNA_L-elsbetiae_contig1571.3990.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1571 10332..15143 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1571.3990.1 ID=prot_L-elsbetiae_contig1571.3990.1|Name=mRNA_L-elsbetiae_contig1571.3990.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=232bp
MKLLWCMFTLCVSGGNSFVSPFVPAPVSPSSTAAGRCRSQTLETRPRAAA
PMAMSVSPGNNFRATVASWTLAAVLLAGVPLLGAPAPASAISGGGLDYAE
LNLTGKDFSNGKYKSKDFSGAIAKEVNFSGSDLRGVRFFKADLKKANFSG
ANLGTASLEEADLDGTIFTNAVATGSYFNSMDNVGDISGADFTDALIRKD
VAKALCARPDAKGTNPTTGTDTRDSLLCDMF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0016465peptide_repeat