prot_L-elsbetiae_contig157.3985.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig157.3985.1
Unique Nameprot_L-elsbetiae_contig157.3985.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length52
Homology
BLAST of mRNA_L-elsbetiae_contig157.3985.1 vs. uniprot
Match: D8LC80_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC80_ECTSI)

HSP 1 Score: 95.5 bits (236), Expect = 1.020e-22
Identity = 41/48 (85.42%), Postives = 43/48 (89.58%), Query Frame = 0
Query:    4 LGDPVIDFTLHDTDGNRWNLGEVLEAGQGKPVVLIFGMRTCPAYQGLD 51
            LG P +DFTLHD DGNRWNLGEVL AG+GKPVVLIFGM TCPAYQGLD
Sbjct:   40 LGSPAVDFTLHDLDGNRWNLGEVLAAGEGKPVVLIFGMWTCPAYQGLD 87          
BLAST of mRNA_L-elsbetiae_contig157.3985.1 vs. uniprot
Match: A0A6H5JSG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSG9_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 2.310e-21
Identity = 39/49 (79.59%), Postives = 43/49 (87.76%), Query Frame = 0
Query:    4 LGDPVIDFTLHDTDGNRWNLGEVLEAGQGKPVVLIFGMRTCPAYQGLDS 52
            LG P +DFTLHD DGNRWNLGEVL AG GKPVV+IFGM TCPA+QGLD+
Sbjct:   65 LGSPAVDFTLHDLDGNRWNLGEVLAAGAGKPVVMIFGMWTCPAFQGLDA 113          
BLAST of mRNA_L-elsbetiae_contig157.3985.1 vs. uniprot
Match: A0A6H5KKN7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKN7_9PHAE)

HSP 1 Score: 66.2 bits (160), Expect = 2.180e-11
Identity = 28/46 (60.87%), Postives = 35/46 (76.09%), Query Frame = 0
Query:    4 LGDPVIDFTLHDTDGNRWNLGEVLEAGQGKPVVLIFGMRTCPAYQG 49
            +G+  +DFTLHD  G RWNLGE LE   G PVV+++GM TCPA+QG
Sbjct:  198 VGEDAVDFTLHDLKGRRWNLGETLER-TGLPVVMVWGMFTCPAFQG 242          
BLAST of mRNA_L-elsbetiae_contig157.3985.1 vs. uniprot
Match: D8LCJ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCJ3_ECTSI)

HSP 1 Score: 63.5 bits (153), Expect = 1.940e-10
Identity = 26/46 (56.52%), Postives = 34/46 (73.91%), Query Frame = 0
Query:    4 LGDPVIDFTLHDTDGNRWNLGEVLEAGQGKPVVLIFGMRTCPAYQG 49
            +G+  +DFTLHD +G RWNLGE LE   G PVV+++GM  CP +QG
Sbjct:  168 VGEDAVDFTLHDLEGRRWNLGETLER-TGLPVVMVWGMFICPGFQG 212          
BLAST of mRNA_L-elsbetiae_contig157.3985.1 vs. uniprot
Match: A0A6H5L0M4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0M4_9PHAE)

HSP 1 Score: 55.8 bits (133), Expect = 9.430e-8
Identity = 29/54 (53.70%), Postives = 34/54 (62.96%), Query Frame = 0
Query:    1 MFQLGDPVIDFTLHDTD-GNRWNLGEVLEA---GQGKPVVLIFGMRTCPAYQGL 50
            + + G   IDFT HD   G  WNL E LE      GKPVVLI+GM TCPA+QG+
Sbjct:   66 LLETGSGAIDFTSHDYPAGEPWNLREHLEGVGGDAGKPVVLIWGMFTCPAFQGM 119          
BLAST of mRNA_L-elsbetiae_contig157.3985.1 vs. uniprot
Match: A0A7S2RV85_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RV85_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 1.450e-7
Identity = 27/48 (56.25%), Postives = 32/48 (66.67%), Query Frame = 0
Query:    5 GDPVIDFTLHDTDGNRWNLGEVLEAGQGKPVVLIFGMRTCPAYQGLDS 52
            GD  +DFTL+D  GN   L  +LE    KPV LI+GM TCPA+QGL S
Sbjct:   68 GDSAVDFTLYDLAGNEVTLSTLLE---DKPVALIWGMWTCPAFQGLRS 112          
BLAST of mRNA_L-elsbetiae_contig157.3985.1 vs. uniprot
Match: A0A835Z1L4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1L4_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 2.470e-7
Identity = 25/52 (48.08%), Postives = 33/52 (63.46%), Query Frame = 0
Query:    1 MFQLGDPVIDFTLHDTDGNRWNLGEVLEAGQGKPVVLIFGMRTCPAYQGLDS 52
            +   G   IDFTL+D DG  W L E L +   +PV LI+GM TCPA++GL +
Sbjct:   40 VLDAGAAAIDFTLYDLDGAAWTLSEHLAS---QPVCLIWGMHTCPAFEGLGT 88          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig157.3985.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D8LC80_ECTSI1.020e-2285.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JSG9_9PHAE2.310e-2179.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KKN7_9PHAE2.180e-1160.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCJ3_ECTSI1.940e-1056.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L0M4_9PHAE9.430e-853.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2RV85_9STRA1.450e-756.25Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A835Z1L4_9STRA2.470e-748.08Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10coord: 1..50
e-value: 6.1E-7
score: 31.2
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 1..45

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig157contigL-elsbetiae_contig157:53865..54020 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig157.3985.1mRNA_L-elsbetiae_contig157.3985.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig157 53865..54020 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig157.3985.1 ID=prot_L-elsbetiae_contig157.3985.1|Name=mRNA_L-elsbetiae_contig157.3985.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=52bp
MFQLGDPVIDFTLHDTDGNRWNLGEVLEAGQGKPVVLIFGMRTCPAYQGL
DS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036249Thioredoxin-like_sf