prot_L-elsbetiae_contig157.3983.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig157.3983.1
Unique Nameprot_L-elsbetiae_contig157.3983.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length1363
Homology
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BLAST of mRNA_L-elsbetiae_contig157.3983.1 vs. uniprot
Match: D8LC76_ECTSI (Possible CAMK/ Leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC76_ECTSI)

HSP 1 Score: 788 bits (2036), Expect = 1.260e-256
Identity = 964/1373 (70.21%), Postives = 1074/1373 (78.22%), Query Frame = 0 
Query:    1 MRPAPSAARANIQLSLPPIIGEEIRLEAICATSNANPIKTAQAAAGVEPEESGEPAATDESWAAYHARNIGRQHSTSNFVAVRRPL-RQLSVELFEEDDSDDTIASRLSSATVEDNASNEERSDKDTESVTWQQSEEGKSRMAQLTKATVAVESPATKMSRKYLQLFAPSNSAHDTYKVLATLHRKMNGTGWPRRGGWDSYLVRRSRVELDGGRVYGIKSKDGRVELLVLSCNKVYGRIPPTIARLESLKCINLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPFQFPAKVKFWFSKLSG------MRALDLGFNGIEEPFPDMRGMHQLQSLVLNNNRIYDQLFEGLAEACPNLFKLHLQNNRLSGEIPQNLGALTQLEVLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERMVVNCERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPLFLKTSLGPNACGLKWKGNPRIIDSRHNFASIMSGIQRAG---PETETSFSEPQDYSQQSHARKSSFRPISFKLSVPHHPTSFRSQLSMSHGYQMTPPGPHLDTERSRGDDEGTIDSEDKDSKGLGWEGGIGAMEEGR-GDFGDGRGGVARPWANSEDVSYFLFKVVAGNALVLIDYIIAARLYVIGCVWGSVLVMVWRAMAGFEGVLATRRFGYGFCWLPVSALGLALTWQARICFHHSCESDLFQALQEVEWGWHAMIQLATQLAAALLWWDRGQVGHWYLLASVGLKAIVVGIVSMQRLDDKRMTRYRNRRSESPKVGSAPSVFRDCFLPWLRDSAWPRLILVGFHAAEVCERTIPLASLIAAFGKWAFFAPLALAPGMIARYVARRAWTSRSGGDGGGIASSLRSTLNLSLALDSAFGAGTREHVLATISTTLEAAVFEVVASNSPREYSEGLHQGLVSSMLVMLGFTWAVVVIELAILGGHERERGA-PRLLSPPPPPRLSLLRHFAPSKPFSRPGSASSKTPTTIQVKPPTTSLVVMPRINDSVYISSSSXXXXGSSELDRIEDGRQKLGGRGGQRTALVVPME 1361
            MRP  SAARA++QL+LPPI+ E     A   TSNA+ ++T   AA  E EE  +P    ++W  YHA +  RQHST++ VA RR   RQLSVELF E D                            ++  W QS+EG+S M +LTK TVAVESPATK+SRKYL+LFAPSNSAHDTYKVLA LHR+MNGTGWPRRGGWDSYLVRRSR ELD GRVYG++SK+G VE L+LS N V GRIPP IARLESL     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX FQFP K +FWF + SG      MR+L+LG N +EEPFPD++GM QLQSLVL+ NR+Y  L E LAE CPNL++L LQ NRLSGEIP +LG LT+LE L XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERMV+NCE    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPLFLK SLGPNACG KW GNPRI+DSRH+FAS+ +G++RAG    +  T+    +D  QQ H+  SSF+PI   L VP  P           GYQ+   G    +++ +G +E            L  E GIG MEE    ++GD   G +R WANSED  YFLFKVV GNALVLID +IAARLY+IGC WG  LV++WR M+G EGVLAT R GYG CWLP++ALGLALTWQAR CFHHSCESDLFQ LQ+VEW WHAMIQL+TQLAAAL WWDRGQVG+WYLLASVG+KA+VVG+VSMQRLDD+R+T+ + RRSE+P  G  PSVFR  FLPWLRDSAWPRLILVGFH AEVCERTIPLASL+AA G W F APLA+APGM ARYVARRA  SR+ GDG  + S+++S L  SLALDSAFGAGT  HV A IS+TLE  VF+ V SN+PR Y + LHQ L+  + V+  FTW +VV+E+ I  G ER     PR+L+     RL+LL     S+  S    ++  T  TI V+P ++SL +        +  S S    G+     IED ++  G RGG+R A VVP+E
Sbjct:  267 MRPGRSAARASVQLALPPIVTEGEPAPAN-ETSNADAVRTIHEAAESEVEEPDQPMG-GQTWKEYHALHPDRQHSTADLVAYRRTRNRQLSVELFGEGDDTSXXXXXXXXXXXXXXXXXXXXXXXXLDTPLWPQSDEGRSMMEKLTKVTVAVESPATKISRKYLKLFAPSNSAHDTYKVLAALHRRMNGTGWPRRGGWDSYLVRRSRAELDEGRVYGVRSKEGSVEYLILSSNNVCGRIPPIIARLESLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFQFPVKFQFWFLRSSGATGGSGMRSLNLGSNEVEEPFPDLQGMEQLQSLVLDQNRMYGGLTESLAETCPNLYRLSLQKNRLSGEIPHSLGMLTKLEHLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERMVMNCECLQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPLFLKASLGPNACGFKWAGNPRIVDSRHHFASV-AGLRRAGGNQADRGTATPPSKDQHQQQHSTNSSFKPIPLTLRVPDLPGCEEKSRLRGSGYQVGAKGGF--SQQLQGSEE------------LDREIGIGVMEEDYLCEYGDDGTGASRLWANSEDFCYFLFKVVVGNALVLIDLVIAARLYLIGCKWGFFLVILWRVMSGMEGVLATHRLGYGRCWLPMAALGLALTWQARKCFHHSCESDLFQVLQQVEWRWHAMIQLSTQLAAALSWWDRGQVGYWYLLASVGMKALVVGVVSMQRLDDRRLTQDKERRSETPAAGLVPSVFRTRFLPWLRDSAWPRLILVGFHVAEVCERTIPLASLVAALGGWMFLAPLAMAPGMCARYVARRALVSRAKGDG--VVSAVKSALKTSLALDSAFGAGTPVHVAAAISSTLETIVFQTVGSNAPRGYPDELHQLLLYWISVLFVFTWVIVVLEVTIPVGRERTLLLRPRVLAR----RLALLG----SRWTSSRSRSNKPTMRTIHVQPSSSSLGLP-------HTPSGSSDGAGA-----IEDDQRTPGWRGGRRVASVVPVE 1600
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig157.3983.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LC76_ECTSI1.260e-25670.21Possible CAMK/ Leucine rich repeat protein n=2 Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 413..436
e-value: 120.0
score: 4.4
coord: 365..389
e-value: 31.0
score: 9.2
coord: 293..317
e-value: 100.0
score: 4.9
coord: 539..563
e-value: 17.0
score: 11.3
coord: 707..731
e-value: 49.0
score: 7.6
coord: 659..682
e-value: 18.0
score: 11.2
coord: 341..364
e-value: 360.0
score: 0.5
coord: 611..635
e-value: 19.0
score: 11.1
coord: 269..292
e-value: 130.0
score: 4.3
coord: 490..510
e-value: 89.0
score: 5.5
NoneNo IPR availableSMARTSM00365LRR_sd22_2coord: 365..384
e-value: 150.0
score: 5.9
coord: 490..513
e-value: 29.0
score: 11.8
coord: 539..565
e-value: 78.0
score: 8.3
coord: 707..722
e-value: 330.0
score: 3.2
coord: 732..761
e-value: 560.0
score: 1.3
coord: 611..634
e-value: 580.0
score: 1.2
NoneNo IPR availablePANTHERPTHR27008:SF193coord: 585..686
NoneNo IPR availablePANTHERPTHR27008:SF193coord: 667..782
NoneNo IPR availablePANTHERPTHR27008FAMILY NOT NAMEDcoord: 223..397
NoneNo IPR availablePANTHERPTHR27008FAMILY NOT NAMEDcoord: 311..478
coord: 466..605
NoneNo IPR availablePANTHERPTHR27008:SF193coord: 311..478
coord: 466..605
NoneNo IPR availablePANTHERPTHR27008FAMILY NOT NAMEDcoord: 667..782
NoneNo IPR availablePANTHERPTHR27008FAMILY NOT NAMEDcoord: 585..686
NoneNo IPR availablePANTHERPTHR27008:SF193coord: 223..397
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1161..1232
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1072..1141
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 1026..1045
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 985..1005
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 955..973
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 951..954
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1046..1050
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 1233..1256
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1006..1025
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 1142..1160
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..930
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 931..950
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 1051..1071
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 974..984
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1257..1362
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 224..530
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 464..779
NoneNo IPR availableTMHMMTMhelixcoord: 950..972
NoneNo IPR availableTMHMMTMhelixcoord: 985..1007
NoneNo IPR availableTMHMMTMhelixcoord: 1049..1071
NoneNo IPR availableTMHMMTMhelixcoord: 1233..1255
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 208..331
e-value: 3.6E-30
score: 106.7
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 434..676
e-value: 1.4E-61
score: 210.5
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 332..433
e-value: 2.5E-30
score: 107.2
coord: 677..793
e-value: 1.6E-24
score: 88.3
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 637..696
e-value: 3.1E-9
score: 36.5
coord: 709..769
e-value: 2.3E-7
score: 30.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig157contigL-elsbetiae_contig157:39799..49128 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig157.3983.1mRNA_L-elsbetiae_contig157.3983.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig157 39526..49662 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig157.3983.1 ID=prot_L-elsbetiae_contig157.3983.1|Name=mRNA_L-elsbetiae_contig157.3983.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1363bp
MRPAPSAARANIQLSLPPIIGEEIRLEAICATSNANPIKTAQAAAGVEPE
ESGEPAATDESWAAYHARNIGRQHSTSNFVAVRRPLRQLSVELFEEDDSD
DTIASRLSSATVEDNASNEERSDKDTESVTWQQSEEGKSRMAQLTKATVA
VESPATKMSRKYLQLFAPSNSAHDTYKVLATLHRKMNGTGWPRRGGWDSY
LVRRSRVELDGGRVYGIKSKDGRVELLVLSCNKVYGRIPPTIARLESLKC
INLSDNHISGPIPVELGSLLQLQTLQLQGNNLRDSIPSLIGSLISLIRLS
LGHNKLSGPLPDSLGNLIHLQYFSAEHNRLTGPVPSSVRHMTALETFNVS
NNELSGAIPDNIGALTRLRKLDLANNRLSGDISTSLGALLSLNWLLLDHN
QLTGPVPANFGDLKELLILNLSFNRLSGPLPSALALLMKLTSASLQGNLF
VGPFQFPAKVKFWFSKLSGMRALDLGFNGIEEPFPDMRGMHQLQSLVLNN
NRIYDQLFEGLAEACPNLFKLHLQNNRLSGEIPQNLGALTQLEVLDLSAN
RFDGSLPASLESLQLLNTFSASNNELSGDLPSFLGSLTLLTCLALDGNQF
SGPMPRELGKLTLLKRLYLENNELVGSIPKELSTCTSLEVLYLHDNRLWG
KIPDSLRALRGLRYLNLHRNKFTGVVPEWLGELSRLRGLVMGENRLRGHI
PWQLGHLHKLQDLYLNDNNLDGNIPERMVVNCERLQRLYLGGNRLTGTVP
RYLRHVKDLRELNIERNNLHGELPIPLFLKTSLGPNACGLKWKGNPRIID
SRHNFASIMSGIQRAGPETETSFSEPQDYSQQSHARKSSFRPISFKLSVP
HHPTSFRSQLSMSHGYQMTPPGPHLDTERSRGDDEGTIDSEDKDSKGLGW
EGGIGAMEEGRGDFGDGRGGVARPWANSEDVSYFLFKVVAGNALVLIDYI
IAARLYVIGCVWGSVLVMVWRAMAGFEGVLATRRFGYGFCWLPVSALGLA
LTWQARICFHHSCESDLFQALQEVEWGWHAMIQLATQLAAALLWWDRGQV
GHWYLLASVGLKAIVVGIVSMQRLDDKRMTRYRNRRSESPKVGSAPSVFR
DCFLPWLRDSAWPRLILVGFHAAEVCERTIPLASLIAAFGKWAFFAPLAL
APGMIARYVARRAWTSRSGGDGGGIASSLRSTLNLSLALDSAFGAGTREH
VLATISTTLEAAVFEVVASNSPREYSEGLHQGLVSSMLVMLGFTWAVVVI
ELAILGGHERERGAPRLLSPPPPPRLSLLRHFAPSKPFSRPGSASSKTPT
TIQVKPPTTSLVVMPRINDSVYISSSSSSSSGSSELDRIEDGRQKLGGRG
GQRTALVVPMEG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt