prot_L-elsbetiae_contig1566.3960.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig1566.3960.1
Unique Name	prot_L-elsbetiae_contig1566.3960.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	197

Homology

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BLAST of mRNA_L-elsbetiae_contig1566.3960.1 vs. uniprot
Match: D7G118_ECTSI (Rab1A, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G118_ECTSI)

HSP 1 Score: 363 bits (932), Expect = 1.760e-126
Identity = 195/196 (99.49%), Postives = 195/196 (99.49%), Query Frame = 0

Query:    1 DHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTGQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDREDKVVDSAAAKEYAESLGIPFLETSAKNASNVEEAFLTMASELIRTREARAATQVDNSTVQLGGXXXXXXXXXKCC 196
            DHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTGQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDREDKVVDSAAAKEYAESLGIPFLETSAKNASNVEEAFLTMASELIRTREARAATQVDNSTV LGGXXXXXXXXXKCC
Sbjct:    7 DHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTGQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDREDKVVDSAAAKEYAESLGIPFLETSAKNASNVEEAFLTMASELIRTREARAATQVDNSTVNLGGXXXXXXXXXKCC 202

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BLAST of mRNA_L-elsbetiae_contig1566.3960.1 vs. uniprot
Match: A0A835Z965_9STRA (Rab1A, rab family GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z965_9STRA)

HSP 1 Score: 323 bits (827), Expect = 2.030e-110
Identity = 169/200 (84.50%), Postives = 175/200 (87.50%), Query Frame = 0

Query:    1 DHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTGQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDREDKVVDSAAAKEYAESLGIPFLETSAKNASNVEEAFLTMASELIRTREARAATQVDNS----TVQLGGXXXXXXXXXKCC 196
            DHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVT QESF HVNDWLSEVNRYASEGTSKLLIGNKSDR DK V +  AK +A+SLGIPFLETSAK+ASNVEEAFLTMASELIRTREARAA Q ++S    TVQL           KCC
Sbjct:    7 DHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFGHVNDWLSEVNRYASEGTSKLLIGNKSDRADKAVTTEQAKSFAQSLGIPFLETSAKSASNVEEAFLTMASELIRTREARAAQQAESSGTAATVQLRPGASGGGSSGKCC 206

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BLAST of mRNA_L-elsbetiae_contig1566.3960.1 vs. uniprot
Match: A0A7S3VAP6_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VAP6_9STRA)

HSP 1 Score: 305 bits (782), Expect = 1.670e-103
Identity = 158/199 (79.40%), Postives = 169/199 (84.92%), Query Frame = 0

Query:    1 DHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTGQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDRE-DKVVDSAAAKEYAESLGIPFLETSAKNASNVEEAFLTMASELIRTREARAAT--QVDNSTVQLGGXXXXXXXXXKCC 196
            D+LFKLVLIGDSGVGKSCLLLRFADDAFT+SYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVT Q+SFDHVNDWL EVNRYASEGT KLL+GNKSDR  DKVV +  AKE+A+ +GIPFLETSAK+A+NVEEAFLTMASELI+ R AR  T    D   VQLGG          CC
Sbjct:   12 DYLFKLVLIGDSGVGKSCLLLRFADDAFTESYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQDSFDHVNDWLKEVNRYASEGTCKLLVGNKSDRTTDKVVTAEQAKEFADDIGIPFLETSAKSAANVEEAFLTMASELIKQRIARGGTAEDADGDNVQLGGGKRAKEMMSNCC 210

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BLAST of mRNA_L-elsbetiae_contig1566.3960.1 vs. uniprot
Match: W7TI50_9STRA (Rab1 family protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TI50_9STRA)

HSP 1 Score: 298 bits (763), Expect = 1.350e-100
Identity = 154/205 (75.12%), Postives = 166/205 (80.98%), Query Frame = 0

Query:    1 DHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTGQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDREDKVVDSAAAKEYAESLGIPFLETSAKNASNVEEAFLTMASELIRTREAR---------AATQVDNSTVQLGGXXXXXXXXXKCC 196
            D LFKLVLIGD+GVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKT KLQIWDTAGQERFRTITSAYYRGADGIIMVYDVT +ESF+H+ DWL+EVNRYASEGT KLL+GNKSDR DKVV +  AK++A+ LGIPFLETSAKNASNVEEAFLTMA ELIR REA+         AA+     TV L            CC
Sbjct:    7 DFLFKLVLIGDTGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTFKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTNEESFEHIQDWLNEVNRYASEGTCKLLVGNKSDRPDKVVSTERAKKFADELGIPFLETSAKNASNVEEAFLTMAQELIRLREAKGAAAPGPGGAASGKSGDTVSLSSKNDKEGVMKNCC 211

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BLAST of mRNA_L-elsbetiae_contig1566.3960.1 vs. uniprot
Match: F0YFR6_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YFR6_AURAN)

HSP 1 Score: 297 bits (761), Expect = 2.130e-100
Identity = 148/169 (87.57%), Postives = 158/169 (93.49%), Query Frame = 0

Query:    1 DHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTGQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDREDKVVDSAAAKEYAESLGIPFLETSAKNASNVEEAFLTMASELIRTREA 169
            DHLFKLVLIGD+GVGKSCLLLRFADDAFT+SYISTIGVDFRFRTVK+D KTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVT  ESFDHV+DWL+EVNRYA+EGT KLL+GNK D EDKVV + AAKEYA+ LGIPFLETSAKNA+NVEEAFLTMA ELIR REA
Sbjct:    7 DHLFKLVLIGDTGVGKSCLLLRFADDAFTESYISTIGVDFRFRTVKVDGKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSSESFDHVSDWLTEVNRYANEGTCKLLVGNKCDMEDKVVTTEAAKEYADGLGIPFLETSAKNATNVEEAFLTMAGELIRLREA 175

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BLAST of mRNA_L-elsbetiae_contig1566.3960.1 vs. uniprot
Match: A0A7S1GR15_CYCTE (Hypothetical protein n=2 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GR15_CYCTE)

HSP 1 Score: 295 bits (755), Expect = 2.230e-99
Identity = 152/185 (82.16%), Postives = 161/185 (87.03%), Query Frame = 0

Query:    1 DHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTGQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDR-EDKVVDSAAAKEYAESLGIPFLETSAKNASNVEEAFLTMASELIRTREARAATQVDNSTVQLGG 184
            D+LFKLVLIGDSGVGKSCLLLRFADDAFT+SYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVT  ESFDHVNDWL EVNRYA+EGT KLL+GNKSDR  DKVV    AKE+A+ LGI FLETSAK+A NVEEAFLTMA ELIR R+AR  T    S + L G
Sbjct:   16 DYLFKLVLIGDSGVGKSCLLLRFADDAFTESYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSSESFDHVNDWLKEVNRYAAEGTVKLLVGNKSDRVADKVVTEEKAKEFADELGIAFLETSAKSAKNVEEAFLTMAGELIRQRDARGITSDGKSGIDLSG 200

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BLAST of mRNA_L-elsbetiae_contig1566.3960.1 vs. uniprot
Match: A0A7S1XNK2_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XNK2_9STRA)

HSP 1 Score: 293 bits (750), Expect = 7.160e-99
Identity = 151/197 (76.65%), Postives = 168/197 (85.28%), Query Frame = 0

Query:    1 DHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTGQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDR-EDKVVDSAAAKEYAESLGIPFLETSAKNASNVEEAFLTMASELIRTREARAATQVDNSTVQLGGXXXXXXXXXKCC 196
            DHLFKLVLIGDSGVGKSCLLLRFADDAFT+SYISTIGVDFRFRTV+IDKK VKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVT QESF+ +  WL+EVNRYA+EGT KLL+GNKSDR ED++V +A  +E A+SLGIPFLETSAKNA+NVEEAFLTMASELI +RE R     D++ +QLG          KCC
Sbjct:    1 DHLFKLVLIGDSGVGKSCLLLRFADDAFTESYISTIGVDFRFRTVRIDKKVVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTNQESFNSITAWLNEVNRYATEGTCKLLVGNKSDRDEDRIVTTAQGEEMAKSLGIPFLETSAKNAANVEEAFLTMASELITSREERGGATGDDANLQLGSSGGGNG---KCC 194

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BLAST of mRNA_L-elsbetiae_contig1566.3960.1 vs. uniprot
Match: A0A7S2N4U8_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2N4U8_9STRA)

HSP 1 Score: 293 bits (749), Expect = 1.760e-98
Identity = 149/185 (80.54%), Postives = 160/185 (86.49%), Query Frame = 0

Query:    1 DHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTGQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDRE-DKVVDSAAAKEYAESLGIPFLETSAKNASNVEEAFLTMASELIRTREARAATQVDNSTVQLGG 184
            DHLFKLVLIGDSGVGKSCLLLRFADDAFT+SYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVT ++SFDHVNDW+ EVNRYASEGT KLL+GNKSDR  DK+V    AKE+A+ LGI FLETSAK+A NVEEAFLTMA ELI+ R  R +   D   V L G
Sbjct:   15 DHLFKLVLIGDSGVGKSCLLLRFADDAFTESYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSKDSFDHVNDWMKEVNRYASEGTCKLLVGNKSDRTADKIVKEEEAKEFADELGIAFLETSAKSAKNVEEAFLTMAGELIKQRAERGSNGDDKQKVSLNG 199

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BLAST of mRNA_L-elsbetiae_contig1566.3960.1 vs. uniprot
Match: A0A7S2C3M2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C3M2_9STRA)

HSP 1 Score: 290 bits (743), Expect = 1.300e-97
Identity = 145/170 (85.29%), Postives = 156/170 (91.76%), Query Frame = 0

Query:    1 DHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTGQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDREDKVVDSAAAKEYAESLGIPFLETSAKNASNVEEAFLTMASELIRTREAR 170
            DHLFKLVLIGDSGVGKSCLLLRFAD+AFT+SYISTIGVDFRFRT+K++K TVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVT QESF+HV+DWL+EVNRYASEGT KLL+GNKSDR D  V S  AK YAE LGIPFLETSAKNA NVE AFLTMASELI+ R+AR
Sbjct:   13 DHLFKLVLIGDSGVGKSCLLLRFADNAFTESYISTIGVDFRFRTIKVEKNTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFNHVSDWLTEVNRYASEGTCKLLVGNKSDRADWAVSSEEAKVYAEKLGIPFLETSAKNAENVETAFLTMASELIKIRQAR 182

[Close]

BLAST of mRNA_L-elsbetiae_contig1566.3960.1 vs. uniprot
Match: A0A7S2Y0T5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0T5_9STRA)

HSP 1 Score: 290 bits (741), Expect = 2.060e-97
Identity = 142/184 (77.17%), Postives = 164/184 (89.13%), Query Frame = 0

Query:    1 DHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTGQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDREDKVVDSAAAKEYAESLGIPFLETSAKNASNVEEAFLTMASELIRTREARAATQVDNSTVQLGG 184
            D+LFKLVLIGDSGVGKSCLLLRFADDAFT+SYISTIGVDFRFRTVK+D+KTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYD+T +E+FDHVNDWL+EV+RYA E T KLL+GNKSDR D+ V++  AKEYA+ LGIPF+ETSAK+A+NVE+AFLTMA +LI  R+A+   +  N  V LGG
Sbjct:    7 DYLFKLVLIGDSGVGKSCLLLRFADDAFTESYISTIGVDFRFRTVKLDQKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDITHKEAFDHVNDWLAEVDRYAGESTCKLLVGNKSDRTDRAVETQTAKEYADELGIPFIETSAKSAANVEQAFLTMAKQLIELRQAKGVEE-SNQNVSLGG 189

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig1566.3960.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig1566.3960.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G118_ECTSI	1.760e-126	99.49	Rab1A, RAB family GTPase n=2 Tax=Ectocarpus TaxID=...	[more]
A0A835Z965_9STRA	2.030e-110	84.50	Rab1A, rab family GTPase n=1 Tax=Tribonema minus T...	[more]
A0A7S3VAP6_9STRA	1.670e-103	79.40	Hypothetical protein n=1 Tax=Chaetoceros debilis T...	[more]
W7TI50_9STRA	1.350e-100	75.12	Rab1 family protein n=2 Tax=Monodopsidaceae TaxID=...	[more]
F0YFR6_AURAN	2.130e-100	87.57	Uncharacterized protein n=1 Tax=Aureococcus anopha...	[more]
A0A7S1GR15_CYCTE	2.230e-99	82.16	Hypothetical protein n=2 Tax=Cyclophora tenuis Tax...	[more]
A0A7S1XNK2_9STRA	7.160e-99	76.65	Hypothetical protein n=1 Tax=Phaeomonas parva TaxI...	[more]
A0A7S2N4U8_9STRA	1.760e-98	80.54	Hypothetical protein n=1 Tax=Helicotheca tamesis T...	[more]
A0A7S2C3M2_9STRA	1.300e-97	85.29	Hypothetical protein n=1 Tax=Dictyocha speculum Ta...	[more]
A0A7S2Y0T5_9STRA	2.060e-97	77.17	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 27..43 score: 38.7 coord: 4..25 score: 58.6 coord: 45..67 score: 56.57 coord: 141..163 score: 44.71 coord: 107..120 score: 40.09
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 4..166 e-value: 9.4E-96 score: 334.1
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 9..196 e-value: 9.0E-5 score: 18.9
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 1..166 e-value: 1.1E-31 score: 121.3
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 6..167 e-value: 4.9E-14 score: 59.3
None	No IPR available	GENE3D	3.40.50.300		coord: 1..196 e-value: 1.9E-67 score: 228.5
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 1..189
None	No IPR available	PANTHER	PTHR24073:SF1110	ZGC:171927	coord: 1..189
None	No IPR available	PROSITE	PS51419	RAB	coord: 1..196 score: 36.571
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 5..163 e-value: 1.6E-61 score: 206.6
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 4..158 e-value: 6.0E-33 score: 111.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 1..167

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig1566	contig	L-elsbetiae_contig1566:7080..13278 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig1566.3960.1	mRNA_L-elsbetiae_contig1566.3960.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig1566 7080..13278 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig1566.3960.1 ID=prot_L-elsbetiae_contig1566.3960.1|Name=mRNA_L-elsbetiae_contig1566.3960.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=197bp
DHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKK
TVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTGQESFDHVNDWLSE
VNRYASEGTSKLLIGNKSDREDKVVDSAAAKEYAESLGIPFLETSAKNAS
NVEEAFLTMASELIRTREARAATQVDNSTVQLGGGGSSASSSSKCC*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001806	Small_GTPase
IPR005225	Small_GTP-bd_dom
IPR027417	P-loop_NTPase