prot_L-elsbetiae_contig15643.3955.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig15643.3955.1
Unique Name	prot_L-elsbetiae_contig15643.3955.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	121

Homology

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BLAST of mRNA_L-elsbetiae_contig15643.3955.1 vs. uniprot
Match: A0A6H5KP04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP04_9PHAE)

HSP 1 Score: 152 bits (384), Expect = 2.010e-45
Identity = 77/123 (62.60%), Postives = 93/123 (75.61%), Query Frame = 0

Query:    1 MDWAMSGWDVTRDGKLQSCVYDSQDYGNFACSDFVPFVSSD---AEVDAANNDDSHRGEGGEGGTVAALVIAGALVVGLVGWMAAVSARRRQRRRWLGTANEAEALPEEDCIHPAEGTYSGLH 120
            MDW+M GWD+TRDG+LQSCVYD+QDY N+ACSDFV F +++   A+ DA N+     G+GGEGGTV ALV+ G L  GLV W+A  S+RR+QRRRWLGTANEAEALPE+  I    G YSG H
Sbjct:    9 MDWSMMGWDLTRDGQLQSCVYDTQDYDNYACSDFVSFAATEETAADGDATNS----GGDGGEGGTVLALVLVGGLFSGLVAWLAITSSRRKQRRRWLGTANEAEALPEDTFIR-LSGPYSGFH 126

[Close]

BLAST of mRNA_L-elsbetiae_contig15643.3955.1 vs. uniprot
Match: D8LDB3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDB3_ECTSI)

HSP 1 Score: 157 bits (397), Expect = 1.270e-44
Identity = 79/123 (64.23%), Postives = 96/123 (78.05%), Query Frame = 0

Query:    1 MDWAMSGWDVTRDGKLQSCVYDSQDYGNFACSDFVPFVSSD---AEVDAANNDDSHRGEGGEGGTVAALVIAGALVVGLVGWMAAVSARRRQRRRWLGTANEAEALPEEDCIHPAEGTYSGLH 120
            MDW+M GWD+TRDG+LQSCVYD+QDY N+ACSDFV F + +   A+VDA N      G+GGEGGTV ALV+AG LV+GLV W+A  S+RRRQRRRWLGTANEAEALPE+  +  ++  YSG H
Sbjct:  239 MDWSMMGWDLTRDGQLQSCVYDTQDYDNYACSDFVSFAAMEETAADVDATNG----GGDGGEGGTVLALVLAGGLVLGLVAWLAITSSRRRQRRRWLGTANEAEALPEDTFVRLSD-PYSGFH 356

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig15643.3955.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig15643.3955.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5KP04_9PHAE	2.010e-45	62.60	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LDB3_ECTSI	1.270e-44	64.23	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 84..120
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..62
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 63..83
None	No IPR available	TMHMM	TMhelix		coord: 61..83

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig15643	contig	L-elsbetiae_contig15643:2233..2980 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig15643.3955.1	mRNA_L-elsbetiae_contig15643.3955.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig15643 1891..3670 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig15643.3955.1 ID=prot_L-elsbetiae_contig15643.3955.1|Name=mRNA_L-elsbetiae_contig15643.3955.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=121bp
MDWAMSGWDVTRDGKLQSCVYDSQDYGNFACSDFVPFVSSDAEVDAANND
DSHRGEGGEGGTVAALVIAGALVVGLVGWMAAVSARRRQRRRWLGTANEA
EALPEEDCIHPAEGTYSGLH*