prot_L-elsbetiae_contig1564.3951.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1564.3951.1
Unique Nameprot_L-elsbetiae_contig1564.3951.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length106
Homology
BLAST of mRNA_L-elsbetiae_contig1564.3951.1 vs. uniprot
Match: D7FVV5_ECTSI (Transcription elongation factor 1 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVV5_ECTSI)

HSP 1 Score: 197 bits (500), Expect = 1.180e-63
Identity = 93/105 (88.57%), Postives = 99/105 (94.29%), Query Frame = 0
Query:    1 MGRRKKSTKKIVIKKNTTLDKVFKCPFCNHDKVVECTMNRKEKTARLQCRMCDINYEMGINYLTEPIDVYTDWIDECETVNAVEGAAEERKDDEAFLDDQELAEG 105
            MGRRKKSTKKIV+KKNTTLDKVFKCPFCNHDKVVECTMN+KEKTARL CRMCD+NYEM INYLTEPIDVYTDWIDECE VNAV+ AAEE KDDE F+DDQE+AEG
Sbjct:    1 MGRRKKSTKKIVVKKNTTLDKVFKCPFCNHDKVVECTMNKKEKTARLLCRMCDVNYEMTINYLTEPIDVYTDWIDECEAVNAVDAAAEEHKDDEQFIDDQEIAEG 105          
BLAST of mRNA_L-elsbetiae_contig1564.3951.1 vs. uniprot
Match: A0A485LI04_9STRA (Transcription elongation factor 1 homolog n=6 Tax=Saprolegniaceae TaxID=4764 RepID=A0A485LI04_9STRA)

HSP 1 Score: 109 bits (273), Expect = 2.510e-29
Identity = 48/84 (57.14%), Postives = 61/84 (72.62%), Query Frame = 0
Query:    1 MGRRKKSTKKIVIKKNTTLDKVFKCPFCNHDKVVECTMNRKEKTARLQCRMCDINYEMGINYLTEPIDVYTDWIDECETVNAVE 84
            MGRRK STKKIV +K   + +VFKCPFC+HD  V+C M+R      L CR+C  +Y+  INYL+EPIDVYTDWIDECE ++  +
Sbjct:    1 MGRRKTSTKKIVTRKKQVVARVFKCPFCSHDDSVQCKMDRDRNVGHLSCRVCSESYQTNINYLSEPIDVYTDWIDECEALHTAQ 84          
BLAST of mRNA_L-elsbetiae_contig1564.3951.1 vs. uniprot
Match: A0A835ZFT2_9STRA (Transcription elongation factor 1 homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFT2_9STRA)

HSP 1 Score: 110 bits (275), Expect = 3.430e-29
Identity = 52/82 (63.41%), Postives = 59/82 (71.95%), Query Frame = 0
Query:    1 MGRRKKSTKKIVIKKNTTLDKVFKCPFCNHDKVVECTMNRKEKTARLQCRMCDINYEMGINYLTEPIDVYTDWIDECETVNA 82
            MGRRK STKKI  KK  TLD  FKCPFC HDKVV+CTMN K+    LQCR CD  Y   INYL+EPID++T+WID  E  +A
Sbjct:    1 MGRRKSSTKKISNKKRPTLDTSFKCPFCCHDKVVQCTMNFKDNVGTLQCRRCDTKYSTVINYLSEPIDIFTEWIDAAEAEHA 82          
BLAST of mRNA_L-elsbetiae_contig1564.3951.1 vs. uniprot
Match: A0A024U4B4_9STRA (Transcription elongation factor 1 homolog n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024U4B4_9STRA)

HSP 1 Score: 109 bits (272), Expect = 3.570e-29
Identity = 48/82 (58.54%), Postives = 61/82 (74.39%), Query Frame = 0
Query:    1 MGRRKKSTKKIVIKKNTTLDKVFKCPFCNHDKVVECTMNRKEKTARLQCRMCDINYEMGINYLTEPIDVYTDWIDECETVNA 82
            MGRRK STKKIV +K   + +VFKCPFC+HD  V+C M+R      L CR+C  +Y+  INYL+EPIDVYTDWIDECE +++
Sbjct:    1 MGRRKTSTKKIVTRKKQVVARVFKCPFCSHDDSVQCKMDRDRNVGHLTCRICSESYQSNINYLSEPIDVYTDWIDECEALHS 82          
BLAST of mRNA_L-elsbetiae_contig1564.3951.1 vs. uniprot
Match: A0A329SPD8_9STRA (Transcription elongation factor 1 homolog n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SPD8_9STRA)

HSP 1 Score: 108 bits (270), Expect = 2.480e-28
Identity = 48/82 (58.54%), Postives = 61/82 (74.39%), Query Frame = 0
Query:    1 MGRRKKSTKKIVIKKNTTLDKVFKCPFCNHDKVVECTMNRKEKTARLQCRMCDINYEMGINYLTEPIDVYTDWIDECETVNA 82
            MGRRKKSTKKI  +K   +  VFKCPFC+HD+ VEC M+R+     L CR+C  +++  I+YL+ PIDVYTDWIDECE +NA
Sbjct:   46 MGRRKKSTKKIQTRKKQVVSTVFKCPFCSHDEAVECKMDRERNIGHLSCRVCTESFQTPIHYLSAPIDVYTDWIDECEALNA 127          
BLAST of mRNA_L-elsbetiae_contig1564.3951.1 vs. uniprot
Match: M4B5A6_HYAAE (Transcription elongation factor 1 homolog n=16 Tax=Oomycota TaxID=4762 RepID=M4B5A6_HYAAE)

HSP 1 Score: 107 bits (266), Expect = 2.760e-28
Identity = 46/82 (56.10%), Postives = 61/82 (74.39%), Query Frame = 0
Query:    1 MGRRKKSTKKIVIKKNTTLDKVFKCPFCNHDKVVECTMNRKEKTARLQCRMCDINYEMGINYLTEPIDVYTDWIDECETVNA 82
            MGRRKK+TKK+  +K   +  VFKCPFC+HD+ VEC M+R+     L CR+C  +++  I+YL+ PIDVYTDWIDECE +NA
Sbjct:    1 MGRRKKATKKVQTRKKQAVSTVFKCPFCSHDEAVECKMDRERNIGHLSCRVCTESFQTPIHYLSAPIDVYTDWIDECEALNA 82          
BLAST of mRNA_L-elsbetiae_contig1564.3951.1 vs. uniprot
Match: A0A6A3LNQ0_9STRA (Transcription elongation factor 1 homolog n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3LNQ0_9STRA)

HSP 1 Score: 108 bits (269), Expect = 4.170e-28
Identity = 48/82 (58.54%), Postives = 61/82 (74.39%), Query Frame = 0
Query:    1 MGRRKKSTKKIVIKKNTTLDKVFKCPFCNHDKVVECTMNRKEKTARLQCRMCDINYEMGINYLTEPIDVYTDWIDECETVNA 82
            MGRRKKSTKKI  +K   +  VFKCPFC+HD+ VEC M+R+     L CR+C  +++  I+YL+ PIDVYTDWIDECE +NA
Sbjct:   52 MGRRKKSTKKISTRKKQIVSTVFKCPFCSHDEAVECKMDRERNIGHLSCRVCTESFQTPIHYLSAPIDVYTDWIDECEALNA 133          
BLAST of mRNA_L-elsbetiae_contig1564.3951.1 vs. uniprot
Match: H3HB17_PHYRM (Uncharacterized protein n=15 Tax=Phytophthora TaxID=4783 RepID=H3HB17_PHYRM)

HSP 1 Score: 108 bits (270), Expect = 6.300e-26
Identity = 48/82 (58.54%), Postives = 61/82 (74.39%), Query Frame = 0
Query:    1 MGRRKKSTKKIVIKKNTTLDKVFKCPFCNHDKVVECTMNRKEKTARLQCRMCDINYEMGINYLTEPIDVYTDWIDECETVNA 82
            MGRRKKSTKKI  +K   +  VFKCPFC+HD+ VEC M+R+     L CR+C  +++  I+YL+ PIDVYTDWIDECE +NA
Sbjct:  310 MGRRKKSTKKIQTRKKQVVSTVFKCPFCSHDEAVECKMDRERNIGHLSCRVCTESFQTPIHYLSAPIDVYTDWIDECEALNA 391          
BLAST of mRNA_L-elsbetiae_contig1564.3951.1 vs. uniprot
Match: A0A0G4J6E9_PLABS (Transcription elongation factor 1 homolog n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J6E9_PLABS)

HSP 1 Score: 99.8 bits (247), Expect = 2.470e-25
Identity = 48/84 (57.14%), Postives = 55/84 (65.48%), Query Frame = 0
Query:    1 MGRRKKSTKKIVIKKNTTLDKVFKCPFCNHDKVVECTMNRKEKTARLQCRMCDINYEMGINYLTEPIDVYTDWIDECETVNAVE 84
            MG+RK S K++V K    L   F CPFCNH   VEC M R E  A + CR+CD NY M IN LTEP+DVY +WIDECE  NA E
Sbjct:    1 MGKRK-SKKRVVRKVVDKLATAFDCPFCNHSLTVECKMKRSENVAEISCRICDANYRMPINSLTEPVDVYCEWIDECEQANAEE 83          
BLAST of mRNA_L-elsbetiae_contig1564.3951.1 vs. uniprot
Match: UPI001CC465E2 (transcription elongation factor 1 homolog n=2 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC465E2)

HSP 1 Score: 99.0 bits (245), Expect = 7.190e-25
Identity = 45/85 (52.94%), Postives = 57/85 (67.06%), Query Frame = 0
Query:    1 MGRRKKSTKKIVIKKNTTLDKVFKCPFCNHDKVVECTMNRKEKTARLQCRMCDINYEMGINYLTEPIDVYTDWIDECETVNAVEG 85
            MG+RK S K    KK   L+ VF CPFCNH+K V CT++RKE    L C +C   Y   IN L+EPID+Y++WIDECE VN ++G
Sbjct:    1 MGKRKSSAKPAPKKKMEKLESVFNCPFCNHEKSVNCTIDRKEMIGELTCCICQEKYSTAINNLSEPIDIYSEWIDECEKVNDMDG 85          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1564.3951.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVV5_ECTSI1.180e-6388.57Transcription elongation factor 1 homolog n=2 Tax=... [more]
A0A485LI04_9STRA2.510e-2957.14Transcription elongation factor 1 homolog n=6 Tax=... [more]
A0A835ZFT2_9STRA3.430e-2963.41Transcription elongation factor 1 homolog n=1 Tax=... [more]
A0A024U4B4_9STRA3.570e-2958.54Transcription elongation factor 1 homolog n=3 Tax=... [more]
A0A329SPD8_9STRA2.480e-2858.54Transcription elongation factor 1 homolog n=2 Tax=... [more]
M4B5A6_HYAAE2.760e-2856.10Transcription elongation factor 1 homolog n=16 Tax... [more]
A0A6A3LNQ0_9STRA4.170e-2858.54Transcription elongation factor 1 homolog n=1 Tax=... [more]
H3HB17_PHYRM6.300e-2658.54Uncharacterized protein n=15 Tax=Phytophthora TaxI... [more]
A0A0G4J6E9_PLABS2.470e-2557.14Transcription elongation factor 1 homolog n=1 Tax=... [more]
UPI001CC465E27.190e-2552.94transcription elongation factor 1 homolog n=2 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038567Transcription elongation factor 1 superfamilyGENE3D2.20.25.190coord: 23..83
e-value: 5.4E-27
score: 95.5
IPR007808Transcription elongation factor 1PFAMPF05129Elf1coord: 2..78
e-value: 8.8E-29
score: 99.4
IPR007808Transcription elongation factor 1PANTHERPTHR20934UNCHARACTERIZEDcoord: 1..93
NoneNo IPR availableSUPERFAMILY57783Zinc beta-ribboncoord: 1..81

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1564contigL-elsbetiae_contig1564:11631..14163 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1564.3951.1mRNA_L-elsbetiae_contig1564.3951.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1564 11025..14216 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1564.3951.1 ID=prot_L-elsbetiae_contig1564.3951.1|Name=mRNA_L-elsbetiae_contig1564.3951.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=106bp
MGRRKKSTKKIVIKKNTTLDKVFKCPFCNHDKVVECTMNRKEKTARLQCR
MCDINYEMGINYLTEPIDVYTDWIDECETVNAVEGAAEERKDDEAFLDDQ
ELAEG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038567T_Elf1_sf
IPR007808Elf1