prot_L-elsbetiae_contig1564.3949.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1564.3949.1
Unique Nameprot_L-elsbetiae_contig1564.3949.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length104
Homology
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BLAST of mRNA_L-elsbetiae_contig1564.3949.1 vs. uniprot
Match: A0A6H5KY04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY04_9PHAE)

HSP 1 Score: 101 bits (252), Expect = 6.770e-23
Identity = 58/73 (79.45%), Postives = 67/73 (91.78%), Query Frame = 0 
Query:    1 PEGEAAALRARLAEAEAKHAEALARVRELEENNFDLEAAVQMVEVEASHRVEKQAKALQSELTFKDHQLAVAQ 73
            P+G  AALRARLAEA+AK+AEAL RVRELEENNFDLEAA+QM+EVEASHRV++QAKALQS+L FKDHQL  A+
Sbjct:  395 PDG-VAALRARLAEAQAKNAEALERVRELEENNFDLEAAMQMIEVEASHRVDRQAKALQSKLAFKDHQLTTAR 466
[Close]
BLAST of mRNA_L-elsbetiae_contig1564.3949.1 vs. uniprot
Match: D7FVV4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVV4_ECTSI)

HSP 1 Score: 55.8 bits (133), Expect = 8.000e-7
Identity = 27/34 (79.41%), Postives = 32/34 (94.12%), Query Frame = 0 
Query:   40 VQMVEVEASHRVEKQAKALQSELTFKDHQLAVAQ 73
            +QM+EVEASHRVE+QAKALQS+LTFKDHQL  A+
Sbjct:    1 MQMIEVEASHRVERQAKALQSKLTFKDHQLTTAR 34
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1564.3949.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KY04_9PHAE6.770e-2379.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVV4_ECTSI8.000e-779.41Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 5..46
NoneNo IPR availableCOILSCoilCoilcoord: 80..100

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1564contigL-elsbetiae_contig1564:5648..7993 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1564.3949.1mRNA_L-elsbetiae_contig1564.3949.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1564 5646..7993 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1564.3949.1 ID=prot_L-elsbetiae_contig1564.3949.1|Name=mRNA_L-elsbetiae_contig1564.3949.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=104bp
PEGEAAALRARLAEAEAKHAEALARVRELEENNFDLEAAVQMVEVEASHR
VEKQAKALQSELTFKDHQLAVAQKDHTSAVRELNAERAKRKRDSQQAARE
RQDA
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