prot_L-elsbetiae_contig15630.3945.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig15630.3945.1
Unique Nameprot_L-elsbetiae_contig15630.3945.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length174
Homology
BLAST of mRNA_L-elsbetiae_contig15630.3945.1 vs. uniprot
Match: D7FGZ5_ECTSI (DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FGZ5_ECTSI)

HSP 1 Score: 330 bits (845), Expect = 3.810e-109
Identity = 161/173 (93.06%), Postives = 168/173 (97.11%), Query Frame = 0
Query:    2 FTQVTVGSLELAANKDIKQIIECTEDFNKYRSLSKHLQEHGHVGKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKSQEERDFVLKDFKGGNFQVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGIAVSFFGSKNSRNCRELMKILKESDNIVPPEL 174
            + QVTVGSLELAANKDIKQIIECTEDFNKYRSLSKHLQ+HGH GKVLVFVETKKGCDALTRSLRQDGYQARCIHGDK+QEERD+VLKDFKGGNFQVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKG+AVSFFGSKNSRN REL+KIL ES+N VPPEL
Sbjct:  329 YYQVTVGSLELAANKDIKQIIECTEDFNKYRSLSKHLQQHGHNGKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKTQEERDYVLKDFKGGNFQVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGVAVSFFGSKNSRNGRELIKILTESENHVPPEL 501          
BLAST of mRNA_L-elsbetiae_contig15630.3945.1 vs. uniprot
Match: D8LL45_ECTSI (Ethylene-responsive DEAD box RNA helicase, putative (RH30) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL45_ECTSI)

HSP 1 Score: 247 bits (631), Expect = 1.330e-81
Identity = 129/176 (73.30%), Postives = 143/176 (81.25%), Query Frame = 0
Query:    1 LFTQVTVGSLELAANKDIKQIIECTEDFNKYRSLSKHLQEHGHVGKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKSQEERDFVLKDFKGGNFQVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGIAVSFFGSKNSRN--CRELMKILKESDNIVPPEL 174
            +  QV VGSLELAANKDIKQIIECTE+FNKYRSL KHLQ+HG  G +LVFVE              D YQARCI GDK++E RD+VLKDFK GNFQVLVATDVAARGLD+K+IQMVINFDFPNNMED++HRI RCGRAGAKG+AV+FFGSKNSRN  C EL+KIL ES N VPP L
Sbjct:    3 MHVQVKVGSLELAANKDIKQIIECTEEFNKYRSLCKHLQQHGRNGNLLVFVE--------------DSYQARCIQGDKTREGRDYVLKDFKSGNFQVLVATDVAARGLDMKEIQMVINFDFPNNMEDFMHRIKRCGRAGAKGVAVNFFGSKNSRNNGC-ELIKILTESGNNVPPVL 163          
BLAST of mRNA_L-elsbetiae_contig15630.3945.1 vs. uniprot
Match: A0A6H5KBB2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KBB2_9PHAE)

HSP 1 Score: 250 bits (639), Expect = 2.330e-79
Identity = 122/173 (70.52%), Postives = 143/173 (82.66%), Query Frame = 0
Query:    2 FTQVTVGSLELAANKDIKQIIECTEDFNKYRSLSKHLQEHGHVGKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKSQEERDFVLKDFKGGNFQVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGIAVSFFGSKNSRNCRELMKILKESDNIVPPEL 174
            + QVTVGSLEL+ANKDI+Q+IE  EDF KYR L KHLQEH + G+VL+FVETKKGCDALTRSLR +G+ A  IHGDK+Q ERD VL DFK G   +LVATDVAARGLDVKDI+MVINFDFP  ME Y+HRIGRCGRAG KG A+SFF +KNS+  REL++ILK+++  VP EL
Sbjct:  226 YYQVTVGSLELSANKDIQQVIEIVEDFGKYRVLVKHLQEHNNAGRVLIFVETKKGCDALTRSLRHEGWPALSIHGDKNQSERDRVLHDFKEGRSLILVATDVAARGLDVKDIRMVINFDFPKEMESYVHRIGRCGRAGHKGTAISFFAAKNSKCARELIRILKQANQKVPSEL 398          
BLAST of mRNA_L-elsbetiae_contig15630.3945.1 vs. uniprot
Match: A0A7S2XX29_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XX29_9STRA)

HSP 1 Score: 252 bits (643), Expect = 6.330e-79
Identity = 120/173 (69.36%), Postives = 145/173 (83.82%), Query Frame = 0
Query:    2 FTQVTVGSLELAANKDIKQIIECTEDFNKYRSLSKHLQEHGHVGKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKSQEERDFVLKDFKGGNFQVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGIAVSFFGSKNSRNCRELMKILKESDNIVPPEL 174
            + QVTVGSLEL+ANKD+ QIIEC EDF KYR L +HL+E G   K L+FVETKKGCDALTRSLR DGY ARCIHGDK+Q+ERD+VL++F+    ++LVATDVAARGLDVK+I  V+NFDFP NMEDY+HRIGRCGRAGAKG A+SFF SKN++  REL++IL ++ + VP EL
Sbjct:  313 YYQVTVGSLELSANKDVTQIIECLEDFGKYRKLQEHLREGGGHLKTLIFVETKKGCDALTRSLRMDGYHARCIHGDKNQDERDWVLREFREDKIELLVATDVAARGLDVKNIVRVVNFDFPGNMEDYVHRIGRCGRAGAKGTAISFFASKNAKMARELIEILNKNGSHVPQEL 485          
BLAST of mRNA_L-elsbetiae_contig15630.3945.1 vs. uniprot
Match: A0A6S9KNI1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9KNI1_HETAK)

HSP 1 Score: 239 bits (609), Expect = 7.540e-74
Identity = 114/173 (65.90%), Postives = 144/173 (83.24%), Query Frame = 0
Query:    2 FTQVTVGSLELAANKDIKQIIECTEDFNKYRSLSKHLQEHGHVGKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKSQEERDFVLKDFKGGNFQVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGIAVSFFGSKNSRNCRELMKILKESDNIVPPEL 174
            + QVTVGSLEL AN DI+Q+IE  ED+ KY  L +  +  G   K LVFVETK+GCDALTRSLR DG+ ARCIHGDK+Q+ERD+VLK+F+  + ++LVATDVAARGLD++DI+MV+NFDFP+NMEDY+HRIGRCGRAGAKG AVSFFGSKN++  REL++I++E+ + VP  L
Sbjct:  308 YYQVTVGSLELQANADIEQVIEICEDYGKYAKLQETFRSRGGP-KALVFVETKRGCDALTRSLRLDGFHARCIHGDKTQQERDWVLKEFRENHCKILVATDVAARGLDIRDIEMVVNFDFPSNMEDYVHRIGRCGRAGAKGTAVSFFGSKNAKLTRELVRIMREAGSAVPSSL 479          
BLAST of mRNA_L-elsbetiae_contig15630.3945.1 vs. uniprot
Match: A0A835ZEN1_9STRA (DEAD box helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEN1_9STRA)

HSP 1 Score: 233 bits (595), Expect = 2.740e-72
Identity = 113/173 (65.32%), Postives = 140/173 (80.92%), Query Frame = 0
Query:    2 FTQVTVGSLELAANKDIKQIIECTEDFNKYRSLSKHLQEHGHVGKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKSQEERDFVLKDFKGGNFQVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGIAVSFFGSKNSRNCRELMKILKESDNIVPPEL 174
            + QVTVGSL+L+ANKDI+Q +E  ED++KY  L ++L+EH   G+VL+FVETKKG D L RSLR DG+ A  IHGDK+Q+ERD+ LK+F+ G   +LVATDVA+RG+DVKDI+MVINFDFPNN+EDYIHRIGR  RAGAKG +V+FF SKN+R  R+L KIL ES N VPP L
Sbjct:  264 YYQVTVGSLDLSANKDIRQYVEVLEDWDKYSKLLQYLREHNDGGRVLIFVETKKGADQLVRSLRADGWPANAIHGDKTQDERDYALKEFREGRKNMLVATDVASRGIDVKDIRMVINFDFPNNLEDYIHRIGRTARAGAKGTSVAFFTSKNARCARDLAKILSESGNDVPPAL 436          
BLAST of mRNA_L-elsbetiae_contig15630.3945.1 vs. uniprot
Match: A0A6S9IVW3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9IVW3_9STRA)

HSP 1 Score: 225 bits (573), Expect = 2.000e-70
Identity = 117/175 (66.86%), Postives = 139/175 (79.43%), Query Frame = 0
Query:    2 FTQVTVGSLELAANKDIKQIIECTEDFNKYRSLSKHLQEHGHV-GKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKSQEERDFVLKDFKGGNFQVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGIAVSFFGS-KNSRNCRELMKILKESDNIVPPEL 174
            F QVTVGSL+LA NKD+ Q+IE   D +KYR+L KHL+E+     +VLVFVETKKGCD LTRSLR DG+QAR +HGDKSQEERD+VL++FK     +LVATDVAARGLDV DI+MV+NFDFPN+ME YIHRIGR GRAG KG+AVSFF S KN R  REL+ IL+ +   +P EL
Sbjct:  139 FYQVTVGSLDLAGNKDVTQVIEVCSDQDKYRNLLKHLRENLTAKDRVLVFVETKKGCDMLTRSLRMDGFQARAMHGDKSQEERDWVLREFKSCQSTLLVATDVAARGLDVDDIRMVVNFDFPNDMESYIHRIGRTGRAGKKGVAVSFFVSQKNGRLARELIDILQRTHQNIPGEL 313          
BLAST of mRNA_L-elsbetiae_contig15630.3945.1 vs. uniprot
Match: A0A4D9CVW6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVW6_9STRA)

HSP 1 Score: 224 bits (570), Expect = 1.170e-69
Identity = 115/171 (67.25%), Postives = 133/171 (77.78%), Query Frame = 0
Query:    4 QVTVGSLELAANKDIKQIIECTEDFNKYRSLSKHLQEHGHVGKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKSQEERDFVLKDFKGGNFQVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGIAVSFFGSKNSRNCRELMKILKESDNIVPPEL 174
            QVTVGSL+LAANKDIKQ +   ED +KY  L + L+E+   GKVLVFVETK+GCD L RSL+ DG+ A  IHGDKSQ++RD+ L+ FK G   +LVATDVAARGLDVKDIQMV NFDFPNNMEDYIHR+GR GRAGAKG A+SF   K+ R  REL KIL+ES N VP  L
Sbjct:  175 QVTVGSLDLAANKDIKQEVMVCEDRDKYGLLLRALKENNTGGKVLVFVETKRGCDQLQRSLQMDGFSAVAIHGDKSQQDRDWTLRQFKEGRSNILVATDVAARGLDVKDIQMVANFDFPNNMEDYIHRVGRTGRAGAKGYALSFVTQKHGRISRELSKILEESGNQVPAAL 345          
BLAST of mRNA_L-elsbetiae_contig15630.3945.1 vs. uniprot
Match: A0A7S3Q052_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q052_9STRA)

HSP 1 Score: 227 bits (579), Expect = 4.140e-69
Identity = 116/175 (66.29%), Postives = 139/175 (79.43%), Query Frame = 0
Query:    2 FTQVTVGSLELAANKDIKQIIECTEDFNKYRSLSKHLQEH-GHVGKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKSQEERDFVLKDFKGGNFQVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGIAVSFFGS-KNSRNCRELMKILKESDNIVPPEL 174
            + QVTVGSLEL  NKD+ Q +E   D +KY +L +HL+E+     +VLVFVETKKGCD LTRSLR DG+QAR +HGDKSQ+ERD+ LK+FKG    +L ATDVAARGLDV DI+MV+NFDFPN+ME+YIHRIGR GRAG KG AVSFF S KN+R  RELM+IL  +D +VPPEL
Sbjct:  335 YYQVTVGSLELTGNKDVTQCVEVCSDQDKYGNLLRHLRENLTDKDRVLVFVETKKGCDMLTRSLRSDGFQARAMHGDKSQDERDWALKEFKGRQSTLLCATDVAARGLDVDDIRMVVNFDFPNDMENYIHRIGRTGRAGKKGTAVSFFVSDKNARIARELMEILNRTDQVVPPEL 509          
BLAST of mRNA_L-elsbetiae_contig15630.3945.1 vs. uniprot
Match: A0A7S1YW91_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YW91_TRICV)

HSP 1 Score: 224 bits (571), Expect = 1.950e-68
Identity = 114/175 (65.14%), Postives = 140/175 (80.00%), Query Frame = 0
Query:    2 FTQVTVGSLELAANKDIKQIIECTEDFNKYRSLSKHLQEHGHV-GKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKSQEERDFVLKDFKGGNFQVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGIAVSFFGS-KNSRNCRELMKILKESDNIVPPEL 174
            + QVTVGSL+LA NKD+ QI+E   D +KYR+L +HL+E+     +VLVFVETKKGCD LTRSLR DG+QAR +HGDKSQEERD+VL++FK     +LVATDVAARGLDV DI+MV+NFDFPN+ME Y+HRIGR GRAG KG+AVSFF S KN R  REL++IL+ +   + PEL
Sbjct:  286 YYQVTVGSLDLAGNKDVTQIVEVCSDQDKYRNLLRHLRENLTAKDRVLVFVETKKGCDMLTRSLRMDGFQARAMHGDKSQEERDWVLREFKSCQSTLLVATDVAARGLDVDDIRMVVNFDFPNDMESYVHRIGRTGRAGKKGVAVSFFVSQKNGRMARELIEILQRTSQNISPEL 460          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15630.3945.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FGZ5_ECTSI3.810e-10993.06DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
D8LL45_ECTSI1.330e-8173.30Ethylene-responsive DEAD box RNA helicase, putativ... [more]
A0A6H5KBB2_9PHAE2.330e-7970.52Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2XX29_9STRA6.330e-7969.36Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6S9KNI1_HETAK7.540e-7465.90Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A835ZEN1_9STRA2.740e-7265.32DEAD box helicase n=1 Tax=Tribonema minus TaxID=30... [more]
A0A6S9IVW3_9STRA2.000e-7066.86Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A4D9CVW6_9STRA1.170e-6967.25Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S3Q052_9STRA4.140e-6966.29Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S1YW91_TRICV1.950e-6865.14Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 58..139
e-value: 3.7E-34
score: 129.5
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 30..139
e-value: 4.7E-33
score: 113.8
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 17..174
score: 24.133
NoneNo IPR availableGENE3D3.40.50.300coord: 6..174
e-value: 5.5E-58
score: 197.2
NoneNo IPR availablePANTHERPTHR24031:SF683coord: 4..166
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 4..166
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 15..168

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig15630contigL-elsbetiae_contig15630:1205..1726 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig15630.3945.1mRNA_L-elsbetiae_contig15630.3945.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig15630 1205..1726 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig15630.3945.1 ID=prot_L-elsbetiae_contig15630.3945.1|Name=mRNA_L-elsbetiae_contig15630.3945.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=174bp
LFTQVTVGSLELAANKDIKQIIECTEDFNKYRSLSKHLQEHGHVGKVLVF
VETKKGCDALTRSLRQDGYQARCIHGDKSQEERDFVLKDFKGGNFQVLVA
TDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGIAVSFFGS
KNSRNCRELMKILKESDNIVPPEL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR027417P-loop_NTPase