prot_L-elsbetiae_contig1563.3942.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1563.3942.1
Unique Nameprot_L-elsbetiae_contig1563.3942.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length533
Homology
BLAST of mRNA_L-elsbetiae_contig1563.3942.1 vs. uniprot
Match: D7FZF9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZF9_ECTSI)

HSP 1 Score: 668 bits (1724), Expect = 7.630e-236
Identity = 375/521 (71.98%), Postives = 422/521 (81.00%), Query Frame = 0
Query:   25 AARSVTAIDCPPLDLVNYNLTDYIRYSTTSDMMYLENGACVTMEDIFHARIDSFTNENKGPVYPFDEMTQQITTNFTGSWYLGSSLFVTEGSRLVMRGSAKGGDCDHLLLASSPDKFIQIRAHGGEILIDGTHVESWDIEAGGVDEDIGDGRSYLSAISEVITNPLETCDGRAKNNMGEARLDIIDSEINHLGYYESESYGIAYKVRGFCKDLSNTEIFDKVSVTGDILNSHIHHLYFGHYSYGHQGGNWSYNEVHDNIGYGFDPHDDSDNVTISNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHIDDEGKPTGNGIMLXXXXXXXXXXXXXXXXNFDSGVALYESSGCEVSRNELYGNKNGIRMSMGSSDNVASNNNININGEDEKYAIYLYRGSDEPDVEGSDGRPRRNHVHGNNITSDDAVVMMRNTDDNIIEDNAIVGMSSRFVDSMNTLWVGNDVPDAHQFLVEDGSCFDPDSDMDAPADEEG-------------YSYAFDHDYTEGFFCGI 532
            AA +  A +CPP+DLVN+N+TDYIR+ST SD +YLENGAC TM DI+ +RID++T ENKGPVYPFDE T  IT N TGSWYLGSSL+VTEG+RLV++G +KGGDCDHLLLASS +KFI +RA+GGEI++DGTHVESWD+  G VDE+  DGRSYLSAISEVI NP   C+G A N+MGEAR+DIIDSEINHLG+YESESYGIAYKVRGFC DLSN E+F+ V VTGDIL SHIHHLYFGHYSYGHQGGNWSYN VHDN+GYGFDPHDDSD VTISNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGH+ D GK TGNGIML XXXXXXXXXX     N DSGVA+YESS CE+S+N L  NKNGIRMSMGS++N+A  N+I INGEDE+YAIYLYRG+D P VEGSDGRPR N V  N++ SD+AVVM RN DDNIIE N I G  SRFVDS NTLW GN VPD H+F +EDGSCFDP+SDMD  A E G                       EGFFCG+
Sbjct:   32 AAATTVATNCPPMDLVNHNITDYIRWSTMSDRLYLENGACATMTDIYESRIDTYTGENKGPVYPFDETTGGITNNVTGSWYLGSSLYVTEGARLVVQGLSKGGDCDHLLLASSAEKFINVRAYGGEIMLDGTHVESWDLLEGTVDENYDDGRSYLSAISEVIINPAMECEGMATNDMGEARMDIIDSEINHLGHYESESYGIAYKVRGFCNDLSNPELFETVGVTGDILGSHIHHLYFGHYSYGHQGGNWSYNTVHDNVGYGFDPHDDSDYVTISNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHVTDAGKITGNGIMLHXXXXXXXXXXNVVENNMDSGVAVYESSNCEISQNNLSRNKNGIRMSMGSANNLAFENHIVINGEDERYAIYLYRGNDTPAVEGSDGRPRNNRVFDNSLMSDNAVVMARNADDNIIEGNTIFGRESRFVDSFNTLWYGNSVPDVHEFKLEDGSCFDPESDMDYVAGEAGGGXXXXXXXXXXXXXXXXXXXXEEGFFCGV 552          
BLAST of mRNA_L-elsbetiae_contig1563.3942.1 vs. uniprot
Match: D7FZF8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZF8_ECTSI)

HSP 1 Score: 584 bits (1505), Expect = 1.660e-202
Identity = 343/513 (66.86%), Postives = 402/513 (78.36%), Query Frame = 0
Query:   33 DCPPLDLVNYNLTDYIRYSTTSDMMYLENGACVTMEDIFHARIDSFTNENKGPVYPFDEMTQQITTNFTGSWYLGSSLFVTEGSRLVMRGSAKGGDCDHLLLASSPDKFIQIRAHGGEILIDGTHVESWDIEAGGVDEDIGDGRSYLSAISEVITNPLETCDGRAKNNMGEARLDIIDSEINHLGYYESESYGIAYKVRGFCKDLSNTEIFDKVSVTGDILNSHIHHLYFGHYSYGHQGGNWSYNEVHDNIGYGFDPHDDSDNVTISNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHIDDEGKPTGNGIMLXXXXXXXXXXXXXXXXNFDSGVALYESSGCEVSRNELYGNKNGIRMSMGSSDNVASNNNININGEDEKYAIYLYRGSDEPDVEGSDGRPRRNHVHGNNITSDDAVVMMRNTDDNIIEDNAIVGMSSRFVDSMNTLWVGNDVPDA-HQFLVEDGSCFDPDSDMDAPADEEGYSYAFDHDYT--------------EGFFC 530
            DC  +DLVN+N+TDYIR+S  SD +YLENGACVT+ DI+ +R+D     NKGP+YPFDE T  I+   TGSWYL S+L++TEGSRLV++G +KGGDCDHLLLASSP+KFI +RAHGGE+++DGTHVESWD+ AG VDE+  DGRSYLSAISEVIT+P ETCDG AKN+MGEAR+DIIDSE+NHLG+Y+SESYGIAYKVRGFCKDLSN E+FD VSVTGDIL S IH  YFGHYSYGHQGGNWS+N++H NIGYGFDPHDDSD +TI NN  XXXXXXXXXXXXXXXXXXXXXXXXXXXGHI++ G+ TGN    XXXXXXXXXXXXXXXX  DSGVALYESS C VS N++YGNKNGIRMS+GSSDN+   N+I ING D KYAIYLY+G+D PDV  SDGRPR NH+  N++ SD+ VV M N+DD   E N + G  SRF DS NTLW  N V D  H + +E  SCFDP+SD++ P   E  +   + + T               GFFC
Sbjct:   50 DCTSMDLVNHNITDYIRWSNMSDRLYLENGACVTLTDIYESRLDD--TGNKGPLYPFDETTLDISDTVTGSWYLESTLYITEGSRLVVQGLSKGGDCDHLLLASSPEKFINLRAHGGELMLDGTHVESWDLAAGTVDENNEDGRSYLSAISEVITDPAETCDGTAKNDMGEARMDIIDSEVNHLGWYDSESYGIAYKVRGFCKDLSNPELFDSVSVTGDILGSDIHDNYFGHYSYGHQGGNWSHNKMHHNIGYGFDPHDDSDYITIHNNEVXXXXXXXXXXXXXXXXXXXXXXXXXXXGHINEAGQRTGNXXXXXXXXXXXXXXXXXXXXXMDSGVALYESSYCAVSDNKIYGNKNGIRMSLGSSDNLLYENDIIINGPDAKYAIYLYQGNDIPDV--SDGRPRNNHIFDNSLVSDNEVVKMLNSDDTAFEGNVVYGRVSRFKDSFNTLWKSNFVEDGIHDYKLELNSCFDPESDIEEPDTYEDVAAMEEEEATTYXXXXXXXXXVSESGFFC 558          
BLAST of mRNA_L-elsbetiae_contig1563.3942.1 vs. uniprot
Match: A0A6H5KBD3_9PHAE (MEP17 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBD3_9PHAE)

HSP 1 Score: 524 bits (1350), Expect = 2.340e-179
Identity = 325/506 (64.23%), Postives = 380/506 (75.10%), Query Frame = 0
Query:   58 YLENGACVTMEDIFHARIDSFTNENKGPVYPFDEMTQQITTNFTGSWYLGSSLFVTEGSRLVMRGSAKGGDCDHLLLASSPDKFIQIRAHGGEILIDGTHVESWDIEAGGVDEDIGDGRSYLSAISEVITNPLETCDGRAKNNMGEARLDIIDSEINH--------------------LGYYESESYGIAYKVRGFCKDLSNTEIFDKVSVTGDILNSHIHHLYFGHYSYGHQGGNWSYNEVHDNIGYGFDPHDDSDNVTISNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHIDDEGKPTGNGIMLXXXXXXXXXXXXXXXXNFDSGVALYESSGCEVSRNELYGNKNGIRMSMGSSDNVASNNNININGEDEKYAIYLYRGSDEPDVEGSDGRPRRNHVHGNNITSDDAVVMMRNTDDNIIEDNAIVGMSSRFVDSMNTLWVGNDVPDA-HQFLVEDGSCFDPDSDMDAP---------ADEEG--YSYAFDHDYTE-GFFC 530
            YLENGACVT+ DI+ +R D   + NKGP+YPFDE    I+   TGSWYL SSL++TEGSRLV++G +KGGDCDHLLLASSP+KFI +RAHGGE+++DGTHVESWD+ AG VDE+  DGRSYLSAISEVIT+P ETCDG AKN+MGEAR+DIIDSE+N                     LG+Y+SESYGI+YKVRGFC DLSN E+FD VSVTGDIL S IH  YFGHYSYGHQGGNWS+N++H NIGYGFDPHDDSD +TI NN   XXXXXXXXXXXXXXXXXXXXXXXXXXGHI++ G+ TGN    XXXXXXXXXXXXXXXX  DSGVALYESS C VS N++YG+KNGIRMS+GSSDN+   N+I ING D KYAIYLY+G+D PDV  SDGR R NH+  N++ SD+ VV M N+DD   E N + G  SRF +S NTLW  N V D  H + +E  SCFDP+SD++ P          +EE   YS     D +E GFFC
Sbjct:   35 YLENGACVTLTDIYESRSDD--SGNKGPLYPFDETALDISDTVTGSWYLESSLYITEGSRLVVQGLSKGGDCDHLLLASSPEKFINVRAHGGELMLDGTHVESWDLAAGTVDENNEDGRSYLSAISEVITDPTETCDGTAKNDMGEARMDIIDSEVNRTTQTSHSAPLTSRLPQYKTDLGWYDSESYGISYKVRGFCTDLSNPELFDSVSVTGDILGSDIHDNYFGHYSYGHQGGNWSHNKMHHNIGYGFDPHDDSDYLTIHNNEVYXXXXXXXXXXXXXXXXXXXXXXXXXXGHINEAGQRTGNXXXXXXXXXXXXXXXXXXXXXMDSGVALYESSYCAVSDNKIYGSKNGIRMSLGSSDNLLYENDIIINGPDAKYAIYLYQGNDIPDV--SDGRLRNNHIFDNSLVSDNQVVKMLNSDDTAFEGNVVYGRVSRFKNSFNTLWKSNFVEDGIHDYKLELNSCFDPESDIEEPDTYEDVAAMEEEEATTYSXXXXFDVSESGFFC 536          
BLAST of mRNA_L-elsbetiae_contig1563.3942.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI)

HSP 1 Score: 323 bits (828), Expect = 3.970e-101
Identity = 196/472 (41.53%), Postives = 264/472 (55.93%), Query Frame = 0
Query:   48 IRYSTTSDMMYLEN------GACVTMEDIFHARIDSFTNENKGPVYPFDEMTQQITTNFTGSWYLGSSLFVTEGSRLVMRGSAKGGDCDHLLLASSPDKFIQIRAHGGEILIDGTHVESWDIEAGGVDEDIGDGRSYLSAISEVITNPLETCDGRAKNNMGEARLDIIDSEINHLGYYESESYGIAYKVRGFCKDLSNTEIFDKVSVTGDILNSHIHHLYFGHYSYGHQGGNWSYNEVHDNIGYGFDPHDDSDNVTISNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHIDDEGKPTGNGIMLXXXXXXXXXXXXXXXXNFDSGVALYESSGCEVSRNELYGNKNGIRMSMGSSDNVASNNNININGEDEKYAIYLYRGSDEPDVEGSDGRPRRNHVHGNNITSDDAVVMMRNTD-----DNIIEDNAIVGMSSRFVDSMNTLWVGNDVPDAHQF--LVEDGSCFDPDSD 506
            IRY+ T+  +YLE+      G C T+  I+ +R        K P+Y  D  +  ++   TG+W L   L+V +G  L + G+ +GGD D L L S+ + +I +RAHGG +   GT V SWD      DED  DGRSY+SA+SE++T+  ETC+G AKN MGEAR+DI +SEI +LG+ +SESYG+ +KVRGFCKD SN EIFD V+V G++ +S IHHL FG Y+YGHQ G+W  N++HDN GYGFDPHDDSD +TI +N                             G+    G  T  GI L                N D+G+A+ ES   +VS N    NK G+RMS+G +DNV S N I+ N    KY  Y Y GSDEPDV  S GR + N    N+ +  +  + ++  D     DN+ E     G+  RF D+MN++  GN   D   F   V + SCFD +SD
Sbjct:   51 IRYAGTTKRLYLESADGETRGGCATLGQIWESRA------GKAPLYAVDPDSGDVSETETGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSETYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQ-------GNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNS---KYNAYTYLGSDEPDVVSS-GRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDDAMNSVMQGNTGLDEGDFELKVTNDSCFDGESD 505          
BLAST of mRNA_L-elsbetiae_contig1563.3942.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI)

HSP 1 Score: 323 bits (827), Expect = 4.980e-101
Identity = 195/473 (41.23%), Postives = 265/473 (56.03%), Query Frame = 0
Query:   48 IRYSTTSDMMYLEN-------GACVTMEDIFHARIDSFTNENKGPVYPFDEMTQQITTNFTGSWYLGSSLFVTEGSRLVMRGSAKGGDCDHLLLASSPDKFIQIRAHGGEILIDGTHVESWDIEAGGVDEDIGDGRSYLSAISEVITNPLETCDGRAKNNMGEARLDIIDSEINHLGYYESESYGIAYKVRGFCKDLSNTEIFDKVSVTGDILNSHIHHLYFGHYSYGHQGGNWSYNEVHDNIGYGFDPHDDSDNVTISNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHIDDEGKPTGNGIMLXXXXXXXXXXXXXXXXNFDSGVALYESSGCEVSRNELYGNKNGIRMSMGSSDNVASNNNININGEDEKYAIYLYRGSDEPDVEGSDGRPRRNHVHGNNITSDDAVVMMRNTD-----DNIIEDNAIVGMSSRFVDSMNTLWVGNDVPDAHQF--LVEDGSCFDPDSD 506
            IRY+ T+  +YLE+       G CVT+  I+ +R        KGP+Y  D  +  ++T+ TG+W L   L+V +G  L + GS  GGD D L L S+ + FI +RAHGG +    T V SWD      DED  DGRSY+SAISE+IT+  ETC+G AKN MGEAR+DI  SEI +LGY++SESYG+ +KVRGFC+D SN E+FD V+V G++ +S IHH+ FG Y+YGHQ G+W  N++HDN GYGFDPHDDSD +TI +N                             G+    G  T  GI L                N D+G+A+ ES   +VS N    NK G+R S+G +DNV SNN I+ N E   Y  Y Y G+DEPDV  S GR + N    N+ +  +  + ++  D     DN+ E     G+  RF ++   L  GN   D  +F   V++ +CFD ++D
Sbjct:   46 IRYAGTTARLYLESADNGTTRGGCVTLGQIWESRA------GKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQ-------GNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAE---YNAYSYLGTDEPDVVSS-GRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDNATENLMQGNTGLDDGEFELKVDNDACFDGEAD 501          
BLAST of mRNA_L-elsbetiae_contig1563.3942.1 vs. uniprot
Match: Q7XAJ7_9PHAE (Mannuronan C-5-epimerase n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ7_9PHAE)

HSP 1 Score: 303 bits (775), Expect = 2.150e-93
Identity = 208/471 (44.16%), Postives = 272/471 (57.75%), Query Frame = 0
Query:   48 IRYSTTSDMMYLEN------GACVTMEDIF-HARIDSFTNENKGPVYPFDEMTQQITTNFTGSWYLGSSLFVTEGSRLVMRGSAKGGDCDHLLLASSPDKFIQIRAHGGEILIDGTHVESWDIEAGGVDEDIGDGRSYLSAISEVITNPLETCDGRAKNNMGEARLDIIDSEINHLGYYESESYGIAYKVRGFCKDLSNTEIFDKVSVTGDILNSHIHHLYFGHYSYGHQGGNWSYNEVHDNIGYGFDPHDDSDNVTISNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHIDDEGKPTGNGIMLXXXXXXXXXXXXXXXXNFDSGVALYESSGCEVSRNELYGNKNGIRMSMGSSDNVASNNNININGEDEKYAIYLYRGSDEPDVEGSDGRPRRNHVHGNNITSDDAVVMMRNTD-----DNIIEDNAIVGMSSRFVDSMNTLWVGNDVPDAHQFLVEDGSCFDPDSD 506
            IRYS+  + +YLE+      G CVT+E I+ H R        + P+Y  D  +  I+ + TG+W L   LFV +G  L + G++ GGD D L L S+ D FI +RAHGG +    T V +WD    G D D  DGRSY+SA+SEVIT+  +TC+GRAKNNMGEAR+DI DSE+ +LGY+ SESYG+ +KVRGFC D SN ++F+ V+V G+I +S IHH  FG Y+YGHQ G+W  N++HDN GYGFDPHDDSD +TI +N                             G+    G  +  GI L  XXXXXXXXXXXXXX  D+G+A+ ES   +VS N    NK GIR S+GS  NV  NN I+ +    +Y+ Y Y GSD PDV  S GR + N    NNI      + + + D     DN  ED   +    RF D+  TL  GN   +  +  V +G+ FD  SD
Sbjct:   44 IRYSSVYERLYLESADSKTRGGCVTLEQIWEHQR-------GEAPLYAVDSKSGDISDSATGTWLLTEELFVEDGITLKVHGTSAGGDADELRLLSTSDTFINLRAHGGSLDFLSTKVFAWDTSINGPDRDEEDGRSYVSAVSEVITDDSQTCNGRAKNNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHDLFEDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYDNGYHGIIASKRCNGVSIQ-------GNEVYGGATSSAGIFLHRXXXXXXXXXXXXXXXXDAGLAMMESFNADVSDNIFENNKYGIRFSVGSGRNVFFNNVISGST---RYSTYSYLGSDAPDVVDS-GRSQDNVFQENNIIGGVESIKLLDADGTQFIDNTFEDATTI----RFNDAKKTLMSGNIGLNMSKLKVVNGASFDASSD 492          
BLAST of mRNA_L-elsbetiae_contig1563.3942.1 vs. uniprot
Match: D8LD45_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD45_ECTSI)

HSP 1 Score: 302 bits (773), Expect = 5.520e-92
Identity = 179/469 (38.17%), Postives = 255/469 (54.37%), Query Frame = 0
Query:   48 IRYSTTSDMMYLE------NGACVTMEDIFHARIDSFTNENKGPVYPFDEMTQQITTNFTGSWYLGSSLFVTEGSRLVMRGSAKGGDCDHLLLASSPDK-------FIQIRAHGGEILIDGTHVESWDIEAGGVDEDIGDGRSYLSAISEVITNPLETCDGRAKNNMGEARLDIIDSEINHLGYYESESYGIAYKVRGFCKDLSNTEIFDKVSVTGDILNSHIHHLYFGHYSYGHQGGNWSYNEVHDNIGYGFDPHDDSDNVTISNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHIDDEGKPTGNGIMLXXXXXXXXXXXXXXXXNFDSGVALYESSGCEVSRNELYGNKNGIRMSMGSSDNVASNNNININGEDEKYAIYLYRGSDEPDVEGSDGRPRRNHVHGNNITSDDAVVMMRNTDDNIIEDNAIVGMSS-RFVDSMNTLWVGN-DVPDAHQFLVEDGSCF 501
            IRYS T+  +YLE       G CVT+E I+ AR    T   K P+Y  D ++ + +   TG+W L   L+V +G  L + G+  GG  D L L S+P         +I +RAHGG +  + T V  WD      D D  DGRSY+SA+SE++ +P +TC+G AKN MGEAR+DI++SE+ ++G+++SESYG+ +KVRGFCKD SN E+FD+V+V G+I +S +HH+ F  Y+YGHQ G+W  N VH N GYG+DPHDDSD +TI +N                             G+I   G  T  GI L                N D+G+A+ ESS  E+S N   GNK GIRMS+G  DN  SNN +    +   YAIY Y+GSD  +V+ + GR + N    N +      + ++ +D   I +N         F ++   +  GN  + DA +  + + +CF
Sbjct:  123 IRYSATTGRLYLEAGVEGERGGCVTVEQIWEARGGGTTTGAKAPLYAVDPVSGEYSDVITGTWLLEEDLYVEDGITLKVWGNGSGGYADELRLKSTPPTEDGGNGTYINLRAHGGSLDFEHTKVFGWDTTNNSYDMDETDGRSYISAVSEIVLDPTQTCEGNAKNTMGEARMDIVNSEMGYMGFHDSESYGLTWKVRGFCKDKSNPEVFDQVNVYGNIYDSELHHMNFAVYTYGHQQGDWRRNTVHSNSGYGYDPHDDSDFLTIHDNVVYDNNWHGIIASKRCNNVSIQ-------GNIVYGGNDTSAGIFLHRSSDYAVVKDNHCYGNGDAGMAMLESSNAEISGNIFEGNKYGIRMSVGCRDNFVSNNTMTNTSQ---YAIYTYQGSDPAEVQPT-GRSQDNIFDSNTVVGGPQAIKLKESDGTRITNNVFYEPGLVEFSNTTENVVTGNVGLEDATEVELVEPACF 580          
BLAST of mRNA_L-elsbetiae_contig1563.3942.1 vs. uniprot
Match: A8CEP1_SACJA (Mannuronan C-5 epimerase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A8CEP1_SACJA)

HSP 1 Score: 298 bits (764), Expect = 9.320e-92
Identity = 197/466 (42.27%), Postives = 254/466 (54.51%), Query Frame = 0
Query:   48 IRYSTTSDMMYLEN------GACVTMEDIFHARIDSFTNENKGPVYPFDEMTQQITTNFTGSWYLGSSLFVTEGSRLVMRGSAKGGDCDHLLLASSPDKFIQIRAHGGEILIDGTHVESWDIEAGGVDEDIGDGRSYLSAISEVITNPLETCDGRAKNNMGEARLDIIDSEINHLGYYESESYGIAYKVRGFCKDLSNTEIFDKVSVTGDILNSHIHHLYFGHYSYGHQGGNWSYNEVHDNIGYGFDPHDDSDNVTISNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHIDDEGKPTGNGIMLXXXXXXXXXXXXXXXXNFDSGVALYESSGCEVSRNELYGNKNGIRMSMGSSDNVASNNNININGEDEKYAIYLYRGSDEPDVEGSDGRPRRNHVHGNNITSDDAVVMMRNTDDNIIEDNAIVGMSS-RFVDSMNTLWVGNDVPDAHQFLVEDGSCFDPDSD 506
            IRYS TS  +YLE+      G CVT+EDI+         +   P+Y     +  ++++ TG+W L  SL+V +G  L + G + GG  D L L S+   FI +RAHGG +    T V +WD     V  D   GRSY+SA+SEVIT+  + CDGRAK NMGEAR+DI DSE+ +LGY+ SESYG+ +KVRG C+DLSN E+FD V+V G+I +S IHH YFG Y+YGH+ G+W  N++H N  YGFDPHDDSD +TI +N                  XXXXXXXXXX       G     GI L                N D+G+AL E+   +VS N+   NK GIRMS+G +DNV S N+I  +    KY +Y Y+GSD P V  S GR +         +     V +   D     DN      + RF D   TL  GN         V DGSCFD  SD
Sbjct:   44 IRYSKTSKRLYLESADGNTRGGCVTLEDIWRDL------DGGAPLYAVKPSSGDVSSSITGTWLLTESLYVEDGITLQVHGKSAGGKADELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTSKNKVRTDDSKGRSYISAVSEVITDSKQKCDGRAKKNMGEARMDIEDSEMAYLGYFGSESYGLTWKVRGLCRDLSNLEVFDAVNVYGNIYDSDIHHNYFGVYTYGHEQGDWRRNKMHHNTEYGFDPHDDSDFLTIHDNEVYNNGNHGIIASKRCNGXXXXXXXXXX-------GAAKSVGIFLHRSSDDAIVKDNYVHDNGDAGMALMETFNADVSNNKFEDNKYGIRMSVGCADNVFSKNDITGSS---KYNVYTYQGSDAPWVVDS-GRSQDXXXXXXXXSGGQETVKLTMADGTEFIDNTFKSAKTIRFEDCQGTLMSGNSGLGGASLKVTDGSCFDKKSD 492          
BLAST of mRNA_L-elsbetiae_contig1563.3942.1 vs. uniprot
Match: D7FXE5_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE5_ECTSI)

HSP 1 Score: 291 bits (744), Expect = 5.290e-90
Identity = 163/371 (43.94%), Postives = 216/371 (58.22%), Query Frame = 0
Query:   48 IRYSTTSDMMYLEN-------GACVTMEDIFHARIDSFTNENKGPVYPFDEMTQQITTNFTGSWYLGSSLFVTEGSRLVMRGSAKGGDCDHLLLASSPDKFIQIRAHGGEILIDGTHVESWDIEAGGVDEDIGDGRSYLSAISEVITNPLETCDGRAKNNMGEARLDIIDSEINHLGYYESESYGIAYKVRGFCKDLSNTEIFDKVSVTGDILNSHIHHLYFGHYSYGHQGGNWSYNEVHDNIGYGFDPHDDSDNVTISNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHIDDEGKPTGNGIMLXXXXXXXXXXXXXXXXNFDSGVALYESSGCEVSRNELYGNKNGIRMSMGSSDNVASNNNININGE 411
            IRY+ ++  +YLE+       G CVT+  I+ +R        KGP+Y  D  +  ++T+ TG+W L   L+V +G  L + GS  GGD D L L S+ + FI +RAHGG +    T V SWD      DED  DGRSY+SAISE+IT+  ETC+G AKN MGEAR+DI  SEI +LGY++SESYG+ +KVRGFC+D SN E+FD V+V G++ +S IHH+ FG Y+YGHQ G+W  N++HDN GYGFDPHDDSD +TI +N                             G+    G  T  GI L                N D+G+A+ ES   +VS N    NK G+R S+G +DNV SNN I+ N E
Sbjct:   46 IRYAESTARLYLESADNGTTRGGCVTLGQIWESRA------GKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLEVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQ-------GNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAE 403          
BLAST of mRNA_L-elsbetiae_contig1563.3942.1 vs. uniprot
Match: Q7XAK2_9PHAE (Mannuronan C-5-epimerase n=2 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAK2_9PHAE)

HSP 1 Score: 293 bits (750), Expect = 1.220e-89
Identity = 212/468 (45.30%), Postives = 280/468 (59.83%), Query Frame = 0
Query:   48 IRYSTTSDMMYLEN------GACVTMEDIFHARIDSFTNENKGPVYPFDEMTQQITTNFTGSWYLGSSLFVTEGSRLVMRGSAKGGDCDHLLLASSPDKFIQIRAHGGEILIDGTHVESWDIEAGGVDEDIGDGRSYLSAISEVITNPLETCDGRAKNNMGEARLDIIDSEINHLGYYESESYGIAYKVRGFCKDLSNTEIFDKVSVTGDILNSHIHHLYFGHYSYGHQGGNWSYNEVHDNIGYGFDPHDDSDNVTISNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHIDDEGKPTGNGIMLXXXXXXXXXXXXXXXXNFDSGVALYESSGCEVSRNELYGNKNGIRMSMGSSDNVASNNNININGEDEKYAIYLYRGSDEPDVEGSDGRPRRNHVHGNNITSDDAVVMMRNTDDNIIEDNAIV-GMSSRFVDSMNTLWVGNDVPDAHQFLVEDGSCFDPDSDMD 508
            IRYS +S  +YLE+      G CVT+E+I+         +   P+Y     +  ++++ TG+W L   L+V +G  L + G++ GG+ + L L S+   FI +RAHGG +    T V +WD     V  D    RSY+SA+SE+IT+  E CDG+AK  MGEAR+DI DSE+ +LGY  SESYG+ +KVRGFCKD SN E+FD+V+V G+I +S IHH +FG Y+YGH+ G+W  N++H N  YGFDPHDDSD +TI +N  XXXXXXXXXXXXXXXXXXXXXXXXXX       G     GI L            XXXXN D+G+AL ES   +VS N+   NK G+R+S+G +DNV S N I+   +  KY +Y Y GSD+P V  S GR + N    N IT  D  + +   D     DN      ++RF D+  TL  GN    +    V  G+CFD  SD D
Sbjct:   47 IRYSASSKRLYLESADGKTRGGCVTLEEIWKDL------DGSAPLYAVKPSSGDVSSSATGTWLLTEDLYVEDGITLQVHGTSAGGNANELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTSKNKVRTDGSKARSYISAVSEIITDSKEKCDGKAKKTMGEARMDIEDSEMAYLGYQGSESYGLTWKVRGFCKDGSNPEVFDEVNVYGNIYDSDIHHNHFGVYTYGHEQGDWRRNKMHHNREYGFDPHDDSDFLTIHDNKVXXXXXXXXXXXXXXXXXXXXXXXXXX-------GSSKSVGIFLHRSSDDAIVKDNXXXXNGDAGMALMESFNADVSNNKFEDNKYGVRLSVGCADNVFSKNVIS---DSSKYNVYTYEGSDDPWVVDS-GRSQDNIFSDNTITGGDESIKLTMADGTEFIDNTFKRAKTARFEDAETTLMSGNTGLGSATLKVSKGACFDKKSDSD 497          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1563.3942.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZF9_ECTSI7.630e-23671.98Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
D7FZF8_ECTSI1.660e-20266.86Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5KBD3_9PHAE2.340e-17964.23MEP17 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
D7FXE4_ECTSI3.970e-10141.53Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7G339_ECTSI4.980e-10141.23Mannuronan C-5-epimerase n=2 Tax=Ectocarpus silicu... [more]
Q7XAJ7_9PHAE2.150e-9344.16Mannuronan C-5-epimerase n=1 Tax=Laminaria digitat... [more]
D8LD45_ECTSI5.520e-9238.17Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A8CEP1_SACJA9.320e-9242.27Mannuronan C-5 epimerase n=1 Tax=Saccharina japoni... [more]
D7FXE5_ECTSI5.290e-9043.94Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
Q7XAK2_9PHAE1.220e-8945.30Mannuronan C-5-epimerase n=2 Tax=Laminaria digitat... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006626Parallel beta-helix repeatSMARTSM00710pbh1coord: 293..315
e-value: 0.061
score: 22.5
coord: 350..372
e-value: 37.0
score: 13.2
coord: 317..348
e-value: 16.0
score: 14.4
coord: 457..485
e-value: 7900.0
score: 0.8
coord: 373..394
e-value: 510.0
score: 9.3
coord: 396..421
e-value: 7900.0
score: 0.8
IPR039448Right handed beta helix domainPFAMPF13229Beta_helixcoord: 313..469
e-value: 2.8E-13
score: 50.0
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 46..434
e-value: 3.1E-91
score: 308.2
IPR022441Parallel beta-helix repeat-2TIGRFAMTIGR03804TIGR03804coord: 367..409
e-value: 4.5E-5
score: 21.0
coord: 343..388
e-value: 1.0E-7
score: 29.5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 15..26
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 32..532
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 27..31
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..31
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..31
score: 0.671
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 251..471

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1563contigL-elsbetiae_contig1563:7326..11091 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1563.3942.1mRNA_L-elsbetiae_contig1563.3942.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1563 6316..11241 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1563.3942.1 ID=prot_L-elsbetiae_contig1563.3942.1|Name=mRNA_L-elsbetiae_contig1563.3942.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=533bp
MRAARRNGMAARGTGALRLAALAVAARSVTAIDCPPLDLVNYNLTDYIRY
STTSDMMYLENGACVTMEDIFHARIDSFTNENKGPVYPFDEMTQQITTNF
TGSWYLGSSLFVTEGSRLVMRGSAKGGDCDHLLLASSPDKFIQIRAHGGE
ILIDGTHVESWDIEAGGVDEDIGDGRSYLSAISEVITNPLETCDGRAKNN
MGEARLDIIDSEINHLGYYESESYGIAYKVRGFCKDLSNTEIFDKVSVTG
DILNSHIHHLYFGHYSYGHQGGNWSYNEVHDNIGYGFDPHDDSDNVTISN
NHVYNNGWHGIIASKRCDHVSIQNNIVHDNGHIDDEGKPTGNGIMLHRSC
DFATVTGNKVYDNFDSGVALYESSGCEVSRNELYGNKNGIRMSMGSSDNV
ASNNNININGEDEKYAIYLYRGSDEPDVEGSDGRPRRNHVHGNNITSDDA
VVMMRNTDDNIIEDNAIVGMSSRFVDSMNTLWVGNDVPDAHQFLVEDGSC
FDPDSDMDAPADEEGYSYAFDHDYTEGFFCGI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006626PbH1
IPR039448Beta_helix
IPR012334Pectin_lyas_fold
IPR022441Para_beta_helix_rpt-2
IPR011050Pectin_lyase_fold/virulence