prot_L-elsbetiae_contig15622.3938.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig15622.3938.1
Unique Nameprot_L-elsbetiae_contig15622.3938.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length163
Homology
BLAST of mRNA_L-elsbetiae_contig15622.3938.1 vs. uniprot
Match: D7G7C2_ECTSI (Rep_fac_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7C2_ECTSI)

HSP 1 Score: 296 bits (759), Expect = 2.040e-98
Identity = 152/163 (93.25%), Postives = 158/163 (96.93%), Query Frame = 0
Query:    1 VVVLVGVDRLTKQAQAGLRRTMEKYTSSCRLILLCHSPSKVIEPVRSRCLGVRVPAPEESEVCGVLSSVCRKESLTLPPALAARVAKASNRNLRRAVLMLEACRVQQYPFTEDQEVQMTDWENYITQLAREMCLEQTPRRLLEAREKLYELLTNCIPADIILK 163
            VVVLVGVDRLTKQAQAGLRRTME+YTSSCRLILLCHSPSKVIEPVRSRCLGVRVPAP ESEVC VL+SVCRKESLTLPPALAARVAK S RNLRRAVLM+EACRVQQYPF+EDQEVQMTDWENYITQLARE+ LEQ+PRRLLEAREKLYELLTNCIPADIILK
Sbjct:  140 VVVLVGVDRLTKQAQAGLRRTMERYTSSCRLILLCHSPSKVIEPVRSRCLGVRVPAPSESEVCSVLTSVCRKESLTLPPALAARVAKVSKRNLRRAVLMIEACRVQQYPFSEDQEVQMTDWENYITQLAREVVLEQSPRRLLEAREKLYELLTNCIPADIILK 302          
BLAST of mRNA_L-elsbetiae_contig15622.3938.1 vs. uniprot
Match: A0A7S2SEJ8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SEJ8_9STRA)

HSP 1 Score: 234 bits (598), Expect = 3.680e-74
Identity = 118/163 (72.39%), Postives = 140/163 (85.89%), Query Frame = 0
Query:    1 VVVLVGVDRLTKQAQAGLRRTMEKYTSSCRLILLCHSPSKVIEPVRSRCLGVRVPAPEESEVCGVLSSVCRKESLTLPPALAARVAKASNRNLRRAVLMLEACRVQQYPFTEDQEVQMTDWENYITQLAREMCLEQTPRRLLEAREKLYELLTNCIPADIILK 163
            VV+L+ VDRLT+QAQA LRRTMEKYTSSCRLIL C +PSKVIEPVRSRCLG+RV AP E EVCGVL++V RKE LT+PP LA R+AK S RN+RRA+LMLEA +VQQYPFT DQ VQ+ DWE YI  LA+EM  +Q+P++L++ARE LYELLTNCIPAD+I+K
Sbjct:  131 VVLLMEVDRLTRQAQAALRRTMEKYTSSCRLILYCTNPSKVIEPVRSRCLGIRVAAPTEDEVCGVLANVARKEKLTMPPELALRIAKLSGRNVRRALLMLEATKVQQYPFTVDQTVQLPDWELYIATLAQEMTTDQSPQKLIKAREMLYELLTNCIPADVIMK 293          
BLAST of mRNA_L-elsbetiae_contig15622.3938.1 vs. uniprot
Match: A0A7S2XUU0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUU0_9STRA)

HSP 1 Score: 216 bits (551), Expect = 8.680e-69
Identity = 109/162 (67.28%), Postives = 132/162 (81.48%), Query Frame = 0
Query:    4 LVGVDRLTKQAQAGLRRTMEKYTSSCRLILLCHSPSKVIEPVRSRCLGVRVPAPEESEVCGVLSSVCRKESL--TLPPALAARVAKASNRNLRRAVLMLEACRVQQYPFTEDQEVQMTDWENYITQLAREMCLEQTPRRLLEAREKLYELLTNCIPADIILK 163
            ++ VDRL++QAQAGLRRTMEKY+SSCRL+L C SPSKVIEPVRSRCLG+RVPAP   E+C VL+ V RKE L   LPPALA R++ +S RNLRRA+LMLEACRVQ YPFTEDQ V + DWE +I  LA+++  EQ+P+ LL  REKLY+LL NCIP D+I+K
Sbjct:    1 MMEVDRLSRQAQAGLRRTMEKYSSSCRLVLCCTSPSKVIEPVRSRCLGIRVPAPSHEEICTVLNEVARKEHLGQNLPPALAQRLSMSSGRNLRRAILMLEACRVQTYPFTEDQTVPLPDWELFIASLAKDIINEQSPQMLLTCREKLYKLLINCIPPDVIIK 162          
BLAST of mRNA_L-elsbetiae_contig15622.3938.1 vs. uniprot
Match: F0XVP2_AURAN (AAA domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XVP2_AURAN)

HSP 1 Score: 216 bits (551), Expect = 4.700e-67
Identity = 109/163 (66.87%), Postives = 132/163 (80.98%), Query Frame = 0
Query:    1 VVVLVGVDRLTKQAQAGLRRTMEKYTSSCRLILLCHSPSKVIEPVRSRCLGVRVPAPEESEVCGVLSSVCRKESLTLPPALAARVAKASNRNLRRAVLMLEACRVQQYPFTEDQEVQMTDWENYITQLAREMCLEQTPRRLLEAREKLYELLTNCIPADIILK 163
            VV+LV VDRLT+QAQAGLRRTMEK TSSCRLIL C++PSKVI+P+RSRCLG+RV AP E+E+  VL  V  +E L LPPALAAR+AKAS RNLRRA+L LE C+VQQYPF   Q V + DWE Y+  +A ++  EQ+P+RLL  R+KLYELL+ CIPAD+ILK
Sbjct:  132 VVLLVEVDRLTRQAQAGLRRTMEKCTSSCRLILCCNNPSKVIDPLRSRCLGIRVAAPTEAEIVAVLDDVAARERLDLPPALAARIAKASKRNLRRAILSLEECKVQQYPFDAAQAVPLPDWEQYVVAIASDIAREQSPQRLLATRDKLYELLSKCIPADVILK 294          
BLAST of mRNA_L-elsbetiae_contig15622.3938.1 vs. uniprot
Match: A0A7S4RK33_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RK33_9STRA)

HSP 1 Score: 211 bits (536), Expect = 9.850e-67
Identity = 109/168 (64.88%), Postives = 134/168 (79.76%), Query Frame = 0
Query:    1 VVVLVGVDRLTKQAQAGLRRTMEKYTSSCRLILLCHSPSKVIEPVRSRCLGVRVPAPEESEVCGVLSSVCRKESLTLPPALAARVAKASNRNLRRAVLMLEACRVQQYP-----FTEDQEVQMTDWENYITQLAREMCLEQTPRRLLEAREKLYELLTNCIPADIILK 163
            VVVLV VDRL++QAQA LRRTMEKY++SCRLIL C++ SKVIEPVRSRCLG+RVPAP   ++C VL  V RKES+TLP  LA  +A+ S+RN+RRA+LMLE+C VQ+        + DQ VQ TDWE YI+QLA E+  EQ+P+RL+ AREKLYELL NCIPAD+I+K
Sbjct:   17 VVVLVEVDRLSRQAQAALRRTMEKYSASCRLILCCNNQSKVIEPVRSRCLGIRVPAPSHDDICSVLKKVSRKESITLPDELAVNIARESSRNMRRALLMLESCHVQRRDAHGNSLSADQPVQKTDWELYISQLASEITREQSPQRLMAAREKLYELLINCIPADVIIK 184          
BLAST of mRNA_L-elsbetiae_contig15622.3938.1 vs. uniprot
Match: UPI00101A2291 (replication factor C subunit 3 n=1 Tax=Eptesicus fuscus TaxID=29078 RepID=UPI00101A2291)

HSP 1 Score: 211 bits (538), Expect = 7.810e-66
Identity = 108/163 (66.26%), Postives = 130/163 (79.75%), Query Frame = 0
Query:    1 VVVLVGVDRLTKQAQAGLRRTMEKYTSSCRLILLCHSPSKVIEPVRSRCLGVRVPAPEESEVCGVLSSVCRKESLTLPPALAARVAKASNRNLRRAVLMLEACRVQQYPFTEDQEVQMTDWENYITQLAREMCLEQTPRRLLEAREKLYELLTNCIPADIILK 163
            VV+L  VD+LT+ AQ  LRRTMEKY S+CRLIL C+S SKVI P+RSRCL VRVPAP   E+C VLS+VC+KE LTLP  LA R+A+ S RNLR+A+LM EACRVQQYPFTEDQEV  TDWE Y+ + A  +  +QTP+RLLE R +LYELLT+CIP +II+K
Sbjct:  130 VVLLTEVDKLTRDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVRVPAPSIEEICHVLSTVCKKEGLTLPSQLARRLAEKSCRNLRKALLMCEACRVQQYPFTEDQEVPETDWEVYLRETANAIVSQQTPQRLLEVRGRLYELLTHCIPPEIIMK 292          
BLAST of mRNA_L-elsbetiae_contig15622.3938.1 vs. uniprot
Match: A0A7S2PRB1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PRB1_9STRA)

HSP 1 Score: 213 bits (542), Expect = 1.040e-65
Identity = 112/163 (68.71%), Postives = 128/163 (78.53%), Query Frame = 0
Query:    1 VVVLVGVDRLTKQAQAGLRRTMEKYTSSCRLILLCHSPSKVIEPVRSRCLGVRVPAPEESEVCGVLSSVCRKESLTLPPALAARVAKASNRNLRRAVLMLEACRVQQYPFTEDQEVQMTDWENYITQLAREMCLEQTPRRLLEAREKLYELLTNCIPADIILK 163
            VVVL  VDRL+KQAQA LRRTMEKYTSSCRLIL C + SKVIEPVRSRCLG+RV AP   ++C VL  V RKE  TLP  LA  +A+ S RN+RRA+LMLEAC+VQQ   T DQ VQ TDWE YI+QLA +   EQ+P++LL AREKLYELL NCIPAD+ILK
Sbjct:  142 VVVLNEVDRLSKQAQASLRRTMEKYTSSCRLILCCANQSKVIEPVRSRCLGIRVAAPSHDDICRVLKLVSRKEQFTLPDELAINIARESGRNIRRAILMLEACKVQQNILTADQPVQKTDWELYISQLAMDCAREQSPQKLLAAREKLYELLINCIPADVILK 304          
BLAST of mRNA_L-elsbetiae_contig15622.3938.1 vs. uniprot
Match: UPI001CF44FE1 (replication factor C subunit 3-like n=3 Tax=Acropora TaxID=6127 RepID=UPI001CF44FE1)

HSP 1 Score: 213 bits (541), Expect = 1.600e-65
Identity = 107/163 (65.64%), Postives = 130/163 (79.75%), Query Frame = 0
Query:    1 VVVLVGVDRLTKQAQAGLRRTMEKYTSSCRLILLCHSPSKVIEPVRSRCLGVRVPAPEESEVCGVLSSVCRKESLTLPPALAARVAKASNRNLRRAVLMLEACRVQQYPFTEDQEVQMTDWENYITQLAREMCLEQTPRRLLEAREKLYELLTNCIPADIILK 163
            VVVL  VDRLTK AQ  LRRTMEKYT++CRLIL C+S SKVI  +RSRCLGVRV AP   E+C +L +VC+KE L++P  L+ R+A+ SNRNLRRA+LM EACRVQQYPFT DQ VQ  DWE Y+ + A+++  +QTP+RLLE R +LYELLT+CIP DIILK
Sbjct:  131 VVVLTEVDRLTKDAQHSLRRTMEKYTTTCRLILCCNSTSKVIPAIRSRCLGVRVAAPTAEEICQILHNVCKKEGLSIPAELSKRIAEKSNRNLRRALLMCEACRVQQYPFTPDQHVQEADWEIYLRETAQQIVEQQTPKRLLEIRSRLYELLTHCIPPDIILK 293          
BLAST of mRNA_L-elsbetiae_contig15622.3938.1 vs. uniprot
Match: A0A452S0Q3_URSAM (Replication factor C subunit 3 n=1 Tax=Ursus americanus TaxID=9643 RepID=A0A452S0Q3_URSAM)

HSP 1 Score: 207 bits (526), Expect = 1.710e-65
Identity = 105/163 (64.42%), Postives = 128/163 (78.53%), Query Frame = 0
Query:    1 VVVLVGVDRLTKQAQAGLRRTMEKYTSSCRLILLCHSPSKVIEPVRSRCLGVRVPAPEESEVCGVLSSVCRKESLTLPPALAARVAKASNRNLRRAVLMLEACRVQQYPFTEDQEVQMTDWENYITQLAREMCLEQTPRRLLEAREKLYELLTNCIPADIILK 163
            VV+L  VD+LTK AQ  LRRTMEKY S+CRLIL C+S SKVI P+RSRCL VRVPAP   ++C VLS+VC+KE L LP  LA R+A+ S RNLR+A+LM EACRVQQYPFT DQE+  TDWE Y+ + A  +  +QTP+RLLE R +LYELLT+CIP +II+K
Sbjct:   21 VVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVRVPAPSIEDICHVLSTVCKKEGLNLPSQLAQRLAEKSCRNLRKALLMCEACRVQQYPFTADQEIPETDWEVYLRETANAIVSQQTPQRLLEVRGRLYELLTHCIPPEIIMK 183          
BLAST of mRNA_L-elsbetiae_contig15622.3938.1 vs. uniprot
Match: A0A835YV35_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV35_9STRA)

HSP 1 Score: 213 bits (542), Expect = 2.010e-65
Identity = 108/163 (66.26%), Postives = 131/163 (80.37%), Query Frame = 0
Query:    1 VVVLVGVDRLTKQAQAGLRRTMEKYTSSCRLILLCHSPSKVIEPVRSRCLGVRVPAPEESEVCGVLSSVCRKESLTLPPALAARVAKASNRNLRRAVLMLEACRVQQYPFTEDQEVQMTDWENYITQLAREMCLEQTPRRLLEAREKLYELLTNCIPADIILK 163
            VV+L GVD LTKQAQA LRRTMEKYTSSCRLIL C+S SKVI+PVRSRCL VRVPAP E E+ GVL +V RKE + LP  LAAR+++AS RNLRRA+LMLEAC+V+Q P   +Q V + DWE YI  LA+++  EQ+P+ L+ AR KLYELL NCIPAD++L+
Sbjct:  154 VVLLTGVDSLTKQAQAALRRTMEKYTSSCRLILCCNSISKVIDPVRSRCLSVRVPAPSEPEITGVLGAVARKEGVALPAELAARISRASGRNLRRALLMLEACKVEQSPLLANQRVALADWETYIESLAKDITQEQSPQALVAARGKLYELLVNCIPADVVLR 316          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15622.3938.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7C2_ECTSI2.040e-9893.25Rep_fac_C domain-containing protein n=2 Tax=Ectoca... [more]
A0A7S2SEJ8_9STRA3.680e-7472.39Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2XUU0_9STRA8.680e-6967.28Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
F0XVP2_AURAN4.700e-6766.87AAA domain-containing protein n=1 Tax=Aureococcus ... [more]
A0A7S4RK33_9STRA9.850e-6764.88Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
UPI00101A22917.810e-6666.26replication factor C subunit 3 n=1 Tax=Eptesicus f... [more]
A0A7S2PRB1_9STRA1.040e-6568.71Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
UPI001CF44FE11.600e-6565.64replication factor C subunit 3-like n=3 Tax=Acropo... [more]
A0A452S0Q3_URSAM1.710e-6564.42Replication factor C subunit 3 n=1 Tax=Ursus ameri... [more]
A0A835YV35_9STRA2.010e-6566.26P-loop containing nucleoside triphosphate hydrolas... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.272.10coord: 120..163
e-value: 1.1E-12
score: 49.9
NoneNo IPR availableGENE3D3.40.50.300coord: 1..57
e-value: 9.1E-15
score: 57.1
NoneNo IPR availableGENE3D1.10.8.60coord: 58..109
e-value: 6.3E-9
score: 37.5
NoneNo IPR availablePANTHERPTHR11669:SF1REPLICATION FACTOR C SUBUNIT 3coord: 1..162
NoneNo IPR availablePANTHERPTHR11669REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNITcoord: 1..162
IPR008921DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminalSUPERFAMILY48019post-AAA+ oligomerization domain-likecoord: 119..163
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..107

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig15622contigL-elsbetiae_contig15622:335..3802 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig15622.3938.1mRNA_L-elsbetiae_contig15622.3938.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig15622 335..3802 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig15622.3938.1 ID=prot_L-elsbetiae_contig15622.3938.1|Name=mRNA_L-elsbetiae_contig15622.3938.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=163bp
VVVLVGVDRLTKQAQAGLRRTMEKYTSSCRLILLCHSPSKVIEPVRSRCL
GVRVPAPEESEVCGVLSSVCRKESLTLPPALAARVAKASNRNLRRAVLML
EACRVQQYPFTEDQEVQMTDWENYITQLAREMCLEQTPRRLLEAREKLYE
LLTNCIPADIILK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008921DNA_pol3_clamp-load_cplx_C
IPR027417P-loop_NTPase