prot_L-elsbetiae_contig1560.3929.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1560.3929.1
Unique Nameprot_L-elsbetiae_contig1560.3929.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length127
Homology
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BLAST of mRNA_L-elsbetiae_contig1560.3929.1 vs. uniprot
Match: D7FWS8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWS8_ECTSI)

HSP 1 Score: 147 bits (372), Expect = 2.320e-43
Identity = 80/120 (66.67%), Postives = 92/120 (76.67%), Query Frame = 0 
Query:    8 HRIAFIEADKRRRAARRARDFETSKKAQAEKGRPRRDANIALLQGLLDVVLELEPWDPTRHVSKVGVAWAECGRRVPGYLKGGGRAEPRQLVQLQVTRMGCQLLDPTAKPPWESYTEVVR 127
            HR+  IEADKRRRAAR+A+  E S+KA+AE  RPRRD  +ALL  LLD VLE+EPW+  RH +KV  AW ECGRRVPGYLK G R EPR LVQ QV R+G QL+DPTAK PW+SY EV R
Sbjct:   15 HRV--IEADKRRRAARKAKGLEASRKARAEMRRPRRDEKMALLLRLLDAVLEVEPWNLARH-TKVSEAWEECGRRVPGYLKEGARTEPRLLVQQQVFRLGDQLIDPTAKTPWKSYPEVKR 131
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1560.3929.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FWS8_ECTSI2.320e-4366.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1560contigL-elsbetiae_contig1560:18662..21447 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1560.3929.1mRNA_L-elsbetiae_contig1560.3929.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1560 18662..21447 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1560.3929.1 ID=prot_L-elsbetiae_contig1560.3929.1|Name=mRNA_L-elsbetiae_contig1560.3929.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=127bp
RHRRRQGHRIAFIEADKRRRAARRARDFETSKKAQAEKGRPRRDANIALL
QGLLDVVLELEPWDPTRHVSKVGVAWAECGRRVPGYLKGGGRAEPRQLVQ
LQVTRMGCQLLDPTAKPPWESYTEVVR
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