prot_L-elsbetiae_contig1557.3910.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1557.3910.1
Unique Nameprot_L-elsbetiae_contig1557.3910.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length84
Homology
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BLAST of mRNA_L-elsbetiae_contig1557.3910.1 vs. uniprot
Match: A0A6H5JH46_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH46_9PHAE)

HSP 1 Score: 60.5 bits (145), Expect = 8.990e-9
Identity = 33/82 (40.24%), Postives = 48/82 (58.54%), Query Frame = 0 
Query:   10 MLMLCSVLGASHSLI----VSPGGELKGPRAVISFAEHQTTDDRRTYLQGAQEQGYTCWVFPNYHSAAV---CIQNPGSIYS 84
            +L+L   LG S   I    ++P    +G R V  F E+QTT+DRR+YLQ A+EQGYTC +  + +  AV   C + P + Y+
Sbjct:   10 ILLLIISLGQSRGNIDVRFIAPSAAFEGERFVSFFREYQTTEDRRSYLQAAREQGYTCSMLEHNYQEAVGLFCAKTPTTTYT 91
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1557.3910.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JH46_9PHAE8.990e-940.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..84
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.712

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1557contigL-elsbetiae_contig1557:20523..21004 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1557.3910.1mRNA_L-elsbetiae_contig1557.3910.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1557 20498..21004 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1557.3910.1 ID=prot_L-elsbetiae_contig1557.3910.1|Name=mRNA_L-elsbetiae_contig1557.3910.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=84bp
MVPFSGNLCMLMLCSVLGASHSLIVSPGGELKGPRAVISFAEHQTTDDRR
TYLQGAQEQGYTCWVFPNYHSAAVCIQNPGSIYS
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