prot_L-elsbetiae_contig15536.3892.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig15536.3892.1
Unique Nameprot_L-elsbetiae_contig15536.3892.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length152
Homology
BLAST of mRNA_L-elsbetiae_contig15536.3892.1 vs. uniprot
Match: A0A6H5KD88_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD88_9PHAE)

HSP 1 Score: 208 bits (529), Expect = 1.280e-66
Identity = 137/151 (90.73%), Postives = 142/151 (94.04%), Query Frame = 0
Query:    1 MFGALTFVLARECRSVVTGRMAGALFAGTTCXXXXXXXXXXXXXXXXXXXXXXXXLGVKKFGGEKVVAGNIIIRQRGTQFYPGSGVGMGKDHTLFARYPGFVVFNRNAFSKRRTVSVMKAKVDVEAVAEILAEEQAREARARAASGIYVSM 151
            MFG LT  LARECRSVVTGRMAGALFAGTTCXXXXXXXXXXXXXXXXXXXXXXXXLGVKKFGGE VVAGNIIIRQRGTQFYPG GVGMGKDHTLFA +PGFVVF+R+ F+KRRTVSVMKAKVD EAVA +LAEEQAREARARAASGIYVSM
Sbjct:    1 MFGVLTSALARECRSVVTGRMAGALFAGTTCXXXXXXXXXXXXXXXXXXXXXXXXLGVKKFGGENVVAGNIIIRQRGTQFYPGKGVGMGKDHTLFAMHPGFVVFSRSPFTKRRTVSVMKAKVDTEAVAALLAEEQAREARARAASGIYVSM 151          
BLAST of mRNA_L-elsbetiae_contig15536.3892.1 vs. uniprot
Match: D7FJF8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJF8_ECTSI)

HSP 1 Score: 211 bits (538), Expect = 1.280e-66
Identity = 138/151 (91.39%), Postives = 142/151 (94.04%), Query Frame = 0
Query:    1 MFGALTFVLARECRSVVTGRMAGALFAGTTCXXXXXXXXXXXXXXXXXXXXXXXXLGVKKFGGEKVVAGNIIIRQRGTQFYPGSGVGMGKDHTLFARYPGFVVFNRNAFSKRRTVSVMKAKVDVEAVAEILAEEQAREARARAASGIYVSM 151
            MFG LT VLARECRSVVTGRMAGALFAGTTC XXXXXXXXXXXXXXXXXXXXXXXLGVKKFGGE VVAGNIIIRQRGTQFYPG GVGMGKDHTLFA YPGFVVF+R+ F+KRRTVSVMKAKVD EAVA +LAEEQAREARARAASGIYVSM
Sbjct:   99 MFGVLTSVLARECRSVVTGRMAGALFAGTTCVXXXXXXXXXXXXXXXXXXXXXXXLGVKKFGGENVVAGNIIIRQRGTQFYPGKGVGMGKDHTLFAMYPGFVVFSRSPFTKRRTVSVMKAKVDTEAVAALLAEEQAREARARAASGIYVSM 249          
BLAST of mRNA_L-elsbetiae_contig15536.3892.1 vs. uniprot
Match: A0A6G0XKB3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XKB3_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 8.870e-20
Identity = 46/62 (74.19%), Postives = 49/62 (79.03%), Query Frame = 0
Query:   56 LGVKKFGGEKVVAGNIIIRQRGTQFYPGSGVGMGKDHTLFARYPGFVVFNRNAFSKRRTVSV 117
            LGVKKFGGE VVAGNIIIRQRGT++YP  GVGMGKDHTLFA   GFV F  N   KR+ VSV
Sbjct:   43 LGVKKFGGEAVVAGNIIIRQRGTKYYPSKGVGMGKDHTLFATRDGFVRFWWNVPKKRQEVSV 104          
BLAST of mRNA_L-elsbetiae_contig15536.3892.1 vs. uniprot
Match: D8M2M0_BLAHO (Ribosomal protein L27 n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8M2M0_BLAHO)

HSP 1 Score: 88.2 bits (217), Expect = 9.590e-20
Identity = 39/62 (62.90%), Postives = 52/62 (83.87%), Query Frame = 0
Query:   56 LGVKKFGGEKVVAGNIIIRQRGTQFYPGSGVGMGKDHTLFARYPGFVVFNRNAFSKRRTVSV 117
            LG+KKFGGEKV+ GNII+RQRGT+F+PG GVGMG+DHTL+A   G+V F  N F+K++T+ +
Sbjct:   33 LGLKKFGGEKVIPGNIIMRQRGTKFHPGQGVGMGRDHTLYALTEGYVHFTWNPFNKKQTIDI 94          
BLAST of mRNA_L-elsbetiae_contig15536.3892.1 vs. uniprot
Match: A0A0C5J8G7_9RHOO (50S ribosomal protein L27 n=2 Tax=Rugosibacter TaxID=1914449 RepID=A0A0C5J8G7_9RHOO)

HSP 1 Score: 87.0 bits (214), Expect = 1.230e-19
Identity = 40/67 (59.70%), Postives = 52/67 (77.61%), Query Frame = 0
Query:   56 LGVKKFGGEKVVAGNIIIRQRGTQFYPGSGVGMGKDHTLFARYPGFVVFNRNAFSKRRTVSVMKAKV 122
            LGVK++GG+ + AGNII+RQRGT+F+PG  VGMGKDHTLFA+  G V+F      KRRT+S++ A V
Sbjct:   21 LGVKRYGGQLISAGNIIVRQRGTEFHPGDNVGMGKDHTLFAKVEGTVLFAVKGLKKRRTISIIPAAV 87          
BLAST of mRNA_L-elsbetiae_contig15536.3892.1 vs. uniprot
Match: A0A8I1RRQ9_9PROT (50S ribosomal protein L27 n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A8I1RRQ9_9PROT)

HSP 1 Score: 86.7 bits (213), Expect = 2.050e-19
Identity = 44/74 (59.46%), Postives = 52/74 (70.27%), Query Frame = 0
Query:   56 LGVKKFGGEKVVAGNIIIRQRGTQFYPGSGVGMGKDHTLFARYPGFVVFNRNAFSKRRTVSVMKAKVDVEAVAE 129
            LGVKKFGGE + AGN+I+RQRGT+FYPG GVGMGKDHTLFA   G V F +  F +R  VSV+   +     AE
Sbjct:   21 LGVKKFGGEAIAAGNVIVRQRGTKFYPGEGVGMGKDHTLFATRDGQVAF-KTGFKRRTFVSVLADAIPAATAAE 93          
BLAST of mRNA_L-elsbetiae_contig15536.3892.1 vs. uniprot
Match: A0A6N7R167_9GAMM (50S ribosomal protein L27 n=1 Tax=Spiribacter sp. C176 TaxID=2664894 RepID=A0A6N7R167_9GAMM)

HSP 1 Score: 86.3 bits (212), Expect = 2.400e-19
Identity = 42/65 (64.62%), Postives = 49/65 (75.38%), Query Frame = 0
Query:   56 LGVKKFGGEKVVAGNIIIRQRGTQFYPGSGVGMGKDHTLFARYPGFVVFNRNAFSKRRTVSVMKA 120
            LGVK+FGG+ V+AGNIIIRQRGT F+PG  VGMG DHTLFA+  G VVF R   + RR VS+  A
Sbjct:   21 LGVKRFGGQSVIAGNIIIRQRGTHFHPGENVGMGTDHTLFAKIDGQVVFRRKGPNNRRYVSIQPA 85          
BLAST of mRNA_L-elsbetiae_contig15536.3892.1 vs. uniprot
Match: A0A5C7VLD7_9PROT (50S ribosomal protein L27 n=1 Tax=Nitrosomonas sp. TaxID=42353 RepID=A0A5C7VLD7_9PROT)

HSP 1 Score: 85.9 bits (211), Expect = 3.300e-19
Identity = 40/63 (63.49%), Postives = 51/63 (80.95%), Query Frame = 0
Query:   56 LGVKKFGGEKVVAGNIIIRQRGTQFYPGSGVGMGKDHTLFARYPGFVVFNRNAFSKRRTVSVM 118
            LGVK++GGE + AGNII+RQRGTQF+PG  VGMGKDHTLFA+  G V+F+  +   RRTVS++
Sbjct:   21 LGVKRYGGELIKAGNIIVRQRGTQFHPGDNVGMGKDHTLFAKIEGKVLFSMKSSFNRRTVSIV 83          
BLAST of mRNA_L-elsbetiae_contig15536.3892.1 vs. uniprot
Match: A0A0S2FPC2_9GAMM (50S ribosomal protein L27 n=12 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A0S2FPC2_9GAMM)

HSP 1 Score: 85.9 bits (211), Expect = 3.390e-19
Identity = 41/66 (62.12%), Postives = 52/66 (78.79%), Query Frame = 0
Query:   56 LGVKKFGGEKVVAGNIIIRQRGTQFYPGSGVGMGKDHTLFARYPGFVVFNRNAFSKRRTVSVMKAK 121
            LGVK +GG+ + AGNII+RQRGTQF+PG+GVG+G+DHTLFA   G V F+     KRRTVSV+ A+
Sbjct:   21 LGVKIYGGQSIEAGNIIVRQRGTQFHPGAGVGLGRDHTLFALVDGKVEFSTKGLKKRRTVSVVVAE 86          
BLAST of mRNA_L-elsbetiae_contig15536.3892.1 vs. uniprot
Match: A0A6L7XWV0_9GAMM (50S ribosomal protein L27 n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A6L7XWV0_9GAMM)

HSP 1 Score: 85.9 bits (211), Expect = 3.390e-19
Identity = 41/63 (65.08%), Postives = 51/63 (80.95%), Query Frame = 0
Query:   56 LGVKKFGGEKVVAGNIIIRQRGTQFYPGSGVGMGKDHTLFARYPGFVVFNRNAFSKRRTVSVM 118
            LG+KKFGGE V+AGNII+RQRGT+F+PG+ VG G+DHTLFA   GFV + R    +RRTVSV+
Sbjct:   21 LGLKKFGGEAVLAGNIIVRQRGTRFHPGANVGCGRDHTLFATADGFVKYERLGGQQRRTVSVL 83          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15536.3892.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KD88_9PHAE1.280e-6690.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FJF8_ECTSI1.280e-6691.39Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6G0XKB3_9STRA8.870e-2074.19Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
D8M2M0_BLAHO9.590e-2062.90Ribosomal protein L27 n=1 Tax=Blastocystis hominis... [more]
A0A0C5J8G7_9RHOO1.230e-1959.7050S ribosomal protein L27 n=2 Tax=Rugosibacter Tax... [more]
A0A8I1RRQ9_9PROT2.050e-1959.4650S ribosomal protein L27 n=1 Tax=Alphaproteobacte... [more]
A0A6N7R167_9GAMM2.400e-1964.6250S ribosomal protein L27 n=1 Tax=Spiribacter sp. ... [more]
A0A5C7VLD7_9PROT3.300e-1963.4950S ribosomal protein L27 n=1 Tax=Nitrosomonas sp.... [more]
A0A0S2FPC2_9GAMM3.390e-1962.1250S ribosomal protein L27 n=12 Tax=Gammaproteobact... [more]
A0A6L7XWV0_9GAMM3.390e-1965.0850S ribosomal protein L27 n=2 Tax=Gammaproteobacte... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001684Ribosomal protein L27PRINTSPR00063RIBOSOMALL27coord: 64..88
score: 55.69
coord: 39..63
score: 56.15
coord: 89..113
score: 39.54
IPR001684Ribosomal protein L27TIGRFAMTIGR00062TIGR00062coord: 37..117
e-value: 4.2E-32
score: 108.0
IPR001684Ribosomal protein L27PFAMPF01016Ribosomal_L27coord: 37..117
e-value: 2.3E-32
score: 110.8
IPR001684Ribosomal protein L27PANTHERPTHR15893RIBOSOMAL PROTEIN L27coord: 13..139
IPR001684Ribosomal protein L27HAMAPMF_00539Ribosomal_L27coord: 36..120
score: 24.59
NoneNo IPR availableGENE3D2.40.50.100coord: 56..127
e-value: 1.1E-28
score: 100.6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..15
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 16..151
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..10
NoneNo IPR availablePRODOMPD003114coord: 63..117
e-value: 5.0E-13
score: 176.0
NoneNo IPR availableSUPERFAMILY110324Ribosomal L27 protein-likecoord: 37..117
IPR018261Ribosomal protein L27, conserved sitePROSITEPS00831RIBOSOMAL_L27coord: 69..83

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig15536contigL-elsbetiae_contig15536:2289..3912 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig15536.3892.1mRNA_L-elsbetiae_contig15536.3892.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig15536 1576..3912 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig15536.3892.1 ID=prot_L-elsbetiae_contig15536.3892.1|Name=mRNA_L-elsbetiae_contig15536.3892.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=152bp
MFGALTFVLARECRSVVTGRMAGALFAGTTCVATRCASKAAGGNTTNGRN
SRGRRLGVKKFGGEKVVAGNIIIRQRGTQFYPGSGVGMGKDHTLFARYPG
FVVFNRNAFSKRRTVSVMKAKVDVEAVAEILAEEQAREARARAASGIYVS
M*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001684Ribosomal_L27
IPR018261Ribosomal_L27_CS