prot_L-elsbetiae_contig1548.3857.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig1548.3857.1
Unique Name	prot_L-elsbetiae_contig1548.3857.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	565

Homology

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BLAST of mRNA_L-elsbetiae_contig1548.3857.1 vs. uniprot
Match: A0A6H5JTK7_9PHAE (F5/8 type C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTK7_9PHAE)

HSP 1 Score: 472 bits (1214), Expect = 3.900e-157
Identity = 318/569 (55.89%), Postives = 378/569 (66.43%), Query Frame = 0

Query:    1 MLDGLENDIPESRWSCEEALPGTITECYATFDLGSSFTLTKLSMWFHESFDTTRETRAFAVSTSDDGSAFADSFEAENTAGLSVGVADDFPFPAGSSGQFVRVTGLLLPDQWLSISEVEVFVDVATPAPV-PATASPIPPTTAPTTASIPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPVDTTAPMVTTPSPTVVSGEACANVTVSNAGELSGVYSSA---DGTSDYVSTGTNAATLAASQTPAVCADPSTADCTVQRWQIRPQDDASTLPSYVVYDEAAHPSDIVQVWLRLDGCDTSGCTSSPTDVNILCGDGSKA-GSATPAPVSPTSSDCGIIEVAGTSGAVGDGFYYDDGSSPANGVTQYQGYDDANGELTSNGNAVVSKRVDTTCTSTSTVTSANADACSWRQWWIEPASTDALDYYTFDEANHPVDIAPGALWYTSNLTVVPYDGDVTITCAPATTPTLEVPITPAPTRGEYADDDLTRAPVPASSNRSTES-VADSAEESEGDSNTVAIAGGVVGGVALLAIVGAVAYKLKKAPXXXPSYDDLVG 563
            M DG  ND+PESRWSCE AL GT  ECYATFDLGSS +LTKL+++F++  D  R T  F VSTS DG+ +  SFE  NT   ++G  +DF FP GSSG++VR TG L  DQWLSI+E E++VDVATPAPV P             T  +  XXXXXXXXXXXXXXXXXXXXXXX          XXXX      T V             +  G AC NVTVSNAG+L+G Y+S+   DG+  YVSTG  AAT+++S  PA CAD + +DC V RWQI P D  STLP+Y VYDEA HPS I +VWLRLD C T GC SSP ++ ILCGDG+ A GS TPAP S T+SDCG+IEVAGTSGA  DGFYYDDGS   + VTQY GYD  NGEL SNG AVV+ RV++TC +TS+  S  ADACSWRQWWIE +S+  + Y+T+DEA+HPVDIA GALWYTS+ +++PYDG V +TCAPATTPTL    +P PT  +  D   TR PV  + +  T + V    E              V GGVALLAI+GAVAYK K  P   PSYDD +G
Sbjct:   60 MNDGDLNDVPESRWSCETALAGTEFECYATFDLGSSQSLTKLTIYFYKCDDVDRATNPFIVSTSTDGTTYTTSFEDVNTIPTAIGAGEDFAFPTGSSGRYVRFTGELADDQWLSINEAEIYVDVATPAPVVPEXXXXXXXXXXXPTVEVTXXXXXXXXXXXXXXXXXXXXXXXXTSGSRAIGITXXXXAASIAPTGVXXXXXXXXXXXXPI-GGPACGNVTVSNAGDLNGDYASSLNGDGSVMYVSTGVIAATISSSAAPAQCADSTASDCNVNRWQIAPLDADSTLPTYWVYDEALHPSTINEVWLRLDNCGTGGCQSSPAELTILCGDGTTASGSGTPAPASVTASDCGVIEVAGTSGAESDGFYYDDGSELGDDVTQYGGYDVVNGELMSNGRAVVANRVNSTCATTSS--STGADACSWRQWWIEASSSGTVSYFTYDEADHPVDIAAGALWYTSDGSIMPYDGAVAVTCAPATTPTLTPATSPVPTTDD--DGTATRMPVEGTHSPGTAAPVVPGGEXXXXXXXXXXXXXXVAGGVALLAILGAVAYKFKDPP---PSYDDAMG 620

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BLAST of mRNA_L-elsbetiae_contig1548.3857.1 vs. uniprot
Match: D7G7P1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7P1_ECTSI)

HSP 1 Score: 357 bits (917), Expect = 3.980e-116
Identity = 215/358 (60.06%), Postives = 246/358 (68.72%), Query Frame = 0

Query:  221 VSNAGELSGVYSSA---DGTSDYVSTGTNAATLAASQTPAVCADPSTADCTVQRWQIRPQDDASTLPSYVVYDEAAHPSDIVQVWLRLDGCDTSGCTSSPTDVNILCGDGSKA-GSATPAPVSPTSSDCGIIEVAGTSGAVGDGFYYDDGSSPANGVTQYQGYDDANGELTSNGNAVVSKRVDTTCTSTSTVTSANADACSWRQWWIEPASTDALDYYTFDEANHPVDIAPGALWYTSNLTVVPYDGDVTITCAPATTPTLEVPITPAPTR------GEYADDDLTRAPVPASSNRSTES-VADSAEESEGDSNTVAIAGG----VVGGVALLAIVGAVAYKLKKAPXXXPSYDDLVG 563
            VSNAG+L+G Y+S+   DG+  YVSTG  AATLA+S  PA CAD S +DCTV RWQI P D  STLP+YVVYDEA HPS I +VWLRLD C T GC SSP ++ I+CGDG+ A GS TPAPVS T+SDC  IEVAGTSGA  DGFYYDDGS   +GVTQY GYD  NGELTSNG AVV+ RVD+TC +T+T  S  ADACSWRQWWIEP+S+  + Y+T+DEA HPVDIA G LWYTS+ TVVPYDGDV +TCAPATTP                  G   D   TR PV  +    T + V    E+ +GD             V GGVALLAI+GAVAYKLK   XXX SYDDLVG
Sbjct:    3 VSNAGDLNGDYASSLNGDGSVTYVSTGVIAATLASSDAPAQCADSSASDCTVNRWQITPSDADSTLPTYVVYDEALHPSTINEVWLRLDNCGTGGCQSSPAELTIVCGDGTTAAGSGTPAPVSVTASDCEAIEVAGTSGAESDGFYYDDGSELGDGVTQYVGYDVVNGELTSNGRAVVANRVDSTCATTTT--STGADACSWRQWWIEPSSSGTVSYFTYDEAGHPVDIAAGTLWYTSDDTVVPYDGDVVVTCAPATTPXXXXXXXXXXXXXXXXXDGGNDDGTATRMPVEGTHAPGTVAPVVAGGEDGDGDXXXXXXXXXXXXXVAGGVALLAILGAVAYKLKXXXXXXXSYDDLVG 358

[Close]

BLAST of mRNA_L-elsbetiae_contig1548.3857.1 vs. uniprot
Match: D7FRB9_ECTSI (F5/8 type C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRB9_ECTSI)

HSP 1 Score: 150 bits (378), Expect = 3.870e-39
Identity = 78/130 (60.00%), Postives = 96/130 (73.85%), Query Frame = 0

Query:    1 MLDGLENDIPESRWSCEEALPGTITECYATFDLGSSFTLTKLSMWFHESFDTTRETRAFAVSTSDDGSAFADSFEAENTAGLSVGVADDFPFPAGSSGQFVRVTGLLLPDQWLSISEVEVFVDVATPAPV 130
            M DG  ND+P+SRWSCE AL GT  ECYATFDLGSS +L KL+++F++S +  R T  F VSTS DG+ F  SFE  NT    +G  +DF FP GSSG++VR TG L  DQWLS++EVE++VDVATPAPV
Sbjct:    1 MNDGNLNDVPDSRWSCETALEGTEFECYATFDLGSSQSLIKLTIYFYKSNEEDRVTNPFVVSTSTDGTTFTTSFEDINTIPTPLGEGEDFAFPTGSSGRYVRFTGDLADDQWLSVNEVEIYVDVATPAPV 130

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig1548.3857.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig1548.3857.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A6H5JTK7_9PHAE	3.900e-157	55.89	F5/8 type C domain-containing protein n=1 Tax=Ecto...	[more]
D7G7P1_ECTSI	3.980e-116	60.06	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7FRB9_ECTSI	3.870e-39	60.00	F5/8 type C domain-containing protein n=1 Tax=Ecto...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008979	Galactose-binding-like domain superfamily	GENE3D	2.60.120.260		coord: 1..123 e-value: 7.3E-10 score: 41.1
IPR008979	Galactose-binding-like domain superfamily	SUPERFAMILY	49785	Galactose-binding domain-like	coord: 26..121
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..524
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 525..546
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 547..564
None	No IPR available	TMHMM	TMhelix		coord: 524..546
IPR000421	Coagulation factor 5/8 C-terminal domain	PROSITE	PS50022	FA58C_3	coord: 1..123 score: 11.096

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig1548	contig	L-elsbetiae_contig1548:2665..12128 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig1548.3857.1	mRNA_L-elsbetiae_contig1548.3857.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig1548 2609..14531 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig1548.3857.1 ID=prot_L-elsbetiae_contig1548.3857.1|Name=mRNA_L-elsbetiae_contig1548.3857.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=565bp
MLDGLENDIPESRWSCEEALPGTITECYATFDLGSSFTLTKLSMWFHESF
DTTRETRAFAVSTSDDGSAFADSFEAENTAGLSVGVADDFPFPAGSSGQF
VRVTGLLLPDQWLSISEVEVFVDVATPAPVPATASPIPPTTAPTTASIPS
TPEPTVAAAPNATATPNPAAIGSTAAPTVEVFVDVNATAAPAATPVDTTA
PMVTTPSPTVVSGEACANVTVSNAGELSGVYSSADGTSDYVSTGTNAATL
AASQTPAVCADPSTADCTVQRWQIRPQDDASTLPSYVVYDEAAHPSDIVQ
VWLRLDGCDTSGCTSSPTDVNILCGDGSKAGSATPAPVSPTSSDCGIIEV
AGTSGAVGDGFYYDDGSSPANGVTQYQGYDDANGELTSNGNAVVSKRVDT
TCTSTSTVTSANADACSWRQWWIEPASTDALDYYTFDEANHPVDIAPGAL
WYTSNLTVVPYDGDVTITCAPATTPTLEVPITPAPTRGEYADDDLTRAPV
PASSNRSTESVADSAEESEGDSNTVAIAGGVVGGVALLAIVGAVAYKLKK
APPPPPSYDDLVGG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR008979	Galactose-bd-like_sf
IPR000421	FA58C