prot_L-elsbetiae_contig15471.3853.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig15471.3853.1
Unique Nameprot_L-elsbetiae_contig15471.3853.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length116
Homology
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BLAST of mRNA_L-elsbetiae_contig15471.3853.1 vs. uniprot
Match: D8LHE2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHE2_ECTSI)

HSP 1 Score: 127 bits (318), Expect = 4.470e-34
Identity = 81/112 (72.32%), Postives = 88/112 (78.57%), Query Frame = 0 
Query:    2 QTGLEKEGSTAEGAVDGVPSPAEAGEEGEGXXXGTAQERGRKRDMYKIRSLLLQGQIAGLRERLKERELDVKELRVLTGGRGQSKLRELGAMLKDAREECEALQAREKSLAE 113
            Q G+    S AE  V G    A A E+ + XXX   Q RGRKRDMYKIRSLLLQGQIAGLRERLKEREL+VKELRVLTGGRGQSKLRELGAMLK+AR EC+AL+ REK LAE
Sbjct:   31 QAGVGGRVSVAEAGVSG--GEASATEQADKXXXXXXQARGRKRDMYKIRSLLLQGQIAGLRERLKERELEVKELRVLTGGRGQSKLRELGAMLKEARGECDALRTREKVLAE 140
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BLAST of mRNA_L-elsbetiae_contig15471.3853.1 vs. uniprot
Match: A0A6H5KCM1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCM1_9PHAE)

HSP 1 Score: 129 bits (324), Expect = 1.810e-32
Identity = 70/76 (92.11%), Postives = 75/76 (98.68%), Query Frame = 0 
Query:   38 QERGRKRDMYKIRSLLLQGQIAGLRERLKERELDVKELRVLTGGRGQSKLRELGAMLKDAREECEALQAREKSLAE 113
            QERGRKRDMYKIRSLLLQGQIAGLRERLKEREL+VKELRVLTGGRGQSKLRELGAMLK+AR EC+AL+AREK+LAE
Sbjct:   75 QERGRKRDMYKIRSLLLQGQIAGLRERLKERELEVKELRVLTGGRGQSKLRELGAMLKEARGECDALRAREKNLAE 150
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15471.3853.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LHE2_ECTSI4.470e-3472.32Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KCM1_9PHAE1.810e-3292.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 58..78
NoneNo IPR availableCOILSCoilCoilcoord: 87..114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig15471contigL-elsbetiae_contig15471:402..3903 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig15471.3853.1mRNA_L-elsbetiae_contig15471.3853.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig15471 402..3903 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig15471.3853.1 ID=prot_L-elsbetiae_contig15471.3853.1|Name=mRNA_L-elsbetiae_contig15471.3853.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=116bp
MQTGLEKEGSTAEGAVDGVPSPAEAGEEGEGGGGGTAQERGRKRDMYKIR
SLLLQGQIAGLRERLKERELDVKELRVLTGGRGQSKLRELGAMLKDAREE
CEALQAREKSLAEVG*
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