prot_L-elsbetiae_contig15350.3792.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig15350.3792.1
Unique Nameprot_L-elsbetiae_contig15350.3792.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length567
Homology
BLAST of mRNA_L-elsbetiae_contig15350.3792.1 vs. uniprot
Match: A0A6H5JPL2_9PHAE (RTP1_C1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPL2_9PHAE)

HSP 1 Score: 635 bits (1637), Expect = 2.520e-210
Identity = 401/636 (63.05%), Postives = 427/636 (67.14%), Query Frame = 0
Query:    7 GGAGAGLISALAGLQEAEGRGRAVAELLEGLGEGSPVAGKVFDMLLRRYLSLRDGGEASVAGDSAAAVEERTNFQSEPPVSAEGAAAEQHAVMASVVVLAERLGARVFGTGMQMLSCIRLVLEHEQPRGAVVGAAGGGPSSDSGDGYVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAESGLDLGLGRAGAGGEDGDSGDTLCSVVLALLTTILELGEEERTPEEETELRAMLGPLKGLAARHRSAEVAEMSALLSASILSRGLSPEERREERERVKLGGGSGGDD---VEGGETP-TAKMLLALDAAEEDLKSEAVPMRARGVVTLT---------SRGGGVRD------RVNI--IVAQRLMDTFARMAGDGDSYVYLAAVQGLAALADALPGWCIPPV----------------------AKAPLPLSQRLKIGEAVLLSARRCGDAMPKYAHLYVNAFVLAARERKGSA----------------------------------TSLESKERYHFRASCLSNLAEVCQLLRWSLGRFSQDIVDLGVGILSMETGASEEATLARRGASFLLGRLLRGAGGDVLQVIPAAELRTAYRALKRCAERDPDEVTRSHARNGLGCLDVAIRGQLFPAG 565
            GG GAGL+ ALAGL+EAEGR RA AELLEGLGE SPVAGKVFDMLLRRYLSLRDGG   V    A+  EE T  QSEP  SA  AAAEQHAVMASVVVLAERLGARVFGTGMQMLSCIRLVLEHEQP    V A  G  S    DGYV                              AE   DLG     A G   +S DTLCSVVLALLTT+LELGEEER  EEE ELRAMLGPLKGLAA HRS EVAEMSALLSASILSRGLSPEERREE                  EG E    A+M+ ALDAAEEDL+SEAVP+RARGVVTLT         S  GG         RVN+   VA+RL+DT+ RM GDGDSYVYLAAVQGLAALADALPGW IP +                      A  PLPLSQRLKIGEAVLLSARRCGDAMPK+AHL+VNAFV+AARER                                      +SLESKER HFRASCLSNLAEVCQLLRWSLGRFS D+VDL  G+LS ETG SEE+TLARRGASFLLGR+LRGAGGDVL+++PAAELR AYRALKR A  D DE+TRSHARNGLG LD AIRGQLFP G
Sbjct:  812 GGTGAGLVGALAGLKEAEGRARAAAELLEGLGESSPVAGKVFDMLLRRYLSLRDGGGTPVVSGVASMAEEGTG-QSEPSASA-AAAAEQHAVMASVVVLAERLGARVFGTGMQMLSCIRLVLEHEQPP---VTAGAGRTSGGGSDGYVDATERVAQMEEEGVAA--------------AEGVYDLGSSGGEADGHGDNSDDTLCSVVLALLTTVLELGEEERKAEEEAELRAMLGPLKGLAAGHRSVEVAEMSALLSASILSRGLSPEERREEXXXXXXXXXXXXXXXXXAEGEEEARAARMMSALDAAEEDLRSEAVPLRARGVVTLTRLMRATLDGSPSGGXXXXXXXXXRVNMDTAVAERLIDTYTRMTGDGDSYVYLAAVQGLAALADALPGWSIPRLVGIFTATAAAAAHGSAPGVDAAAATPLPLSQRLKIGEAVLLSARRCGDAMPKHAHLFVNAFVVAARERSSDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSLESKERCHFRASCLSNLAEVCQLLRWSLGRFSYDVVDLAAGVLSTETGGSEESTLARRGASFLLGRVLRGAGGDVLEMVPAAELRLAYRALKRAAGSDRDEITRSHARNGLGYLDAAIRGQLFPGG 1428          
BLAST of mRNA_L-elsbetiae_contig15350.3792.1 vs. uniprot
Match: D7FHX3_ECTSI (RTP1_C1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHX3_ECTSI)

HSP 1 Score: 623 bits (1607), Expect = 1.670e-205
Identity = 404/709 (56.98%), Postives = 433/709 (61.07%), Query Frame = 0
Query:   13 LISALAGLQEAEGRGRAVAELLEGLGEGSPVAGKVFDMLLRRYLSLRDGGEASVAGDSAAAVEERTNFQSEPPVSAEGAAAEQHAVMASVVVLAERLGARVFGTGMQMLSCIRLVLEHEQPR-GAVVGAAGGGPSSDSGDGYVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAESGLDLGLGRAGAGGEDGDSGDTLCSVVLALLTTILELGEEERTPEEETELRAMLGPLKGLAARHRSAEVAEMSALLSASILSRGLSPEERREERERVKLGGGSGGDDVEGGETP------TAKMLLALDAAEEDLKSEAVPMRARG----------VVTLT--------------------------------------------SRGGGVRDRVNIIVAQRLMDTFARMAGDGDSYVYLAAVQGLAALADALPGWCIPPVA-------------------------------KAPLPLSQRLKIGEAVLLSARRCGDAMPKYAHLYVNAFVLAARERKG---------------------------------------------------------------SATSLESKERYHFRASCLSNLAEVCQLLRWSLGRFSQDIVDLGVGILSMETGASEEATLARRGASFLLGRLLRGAGGDVLQVIPAAELRTAYRALKRCAERDPDEVTRSHARNGLGCLDVAIRGQLFPAGG 566
            L+ ALAGL+EAEGR RA AELLEGLGEGSPVAGKVFDMLLRRYLSLRDGG   V    A+  E  T+ QSEP  SA  AAAEQHAVMASVVVLAERLGARVFGTGMQMLSCIRLVLEHEQP   A  G  GGG     GDGYV                              AE   DLG     A G+  +S DTLCSVVLALLTT+LELGEEER  EEE ELRAML PLKGLAA HRS EVAEMSALLSASILSRGLSPEERREERERV+  G  G                 A+M+ ALDAAEEDL+SEAVP+RA+G           V L                                              RGGG R  ++  VA+RLMDT+ARMAGDGDSYVYLAAVQGLAALADALPGW IP +                                  PLPLSQRLKIGEAVLLSARRCGDAMPKYAHL+VNAFV+AARER                                                                 S++SLESKERYHFRASCLSNLAEVCQLLRWSLGRFS D+VDL  G+LS ETG SEE+TLARRGASFLLGR+LRGAGGDVL+++PAAELR AYRALKR AE D DEVTRSHARNGLGCLD AIRGQLFP GG
Sbjct:  788 LVGALAGLKEAEGRARAAAELLEGLGEGSPVAGKVFDMLLRRYLSLRDGGGTPVVSGVASTAEAGTD-QSEPSASA-AAAAEQHAVMASVVVLAERLGARVFGTGMQMLSCIRLVLEHEQPPVTAGAGRTGGG----GGDGYVDAAERVAQMEEEGVAA--------------AEGVFDLGSSGEEADGDGDNSDDTLCSVVLALLTTVLELGEEERKAEEEAELRAMLAPLKGLAAGHRSVEVAEMSALLSASILSRGLSPEERREERERVERVGEGGXXXXXXXXXXXXXXARAARMMSALDAAEEDLRSEAVPLRAQGGGDAHKSLYCAVLLELLLELVMQENADEKPQRPDFVNLFHTVEPIHRLMRATLDGGPSGGRGGGGRVNMDTAVAERLMDTYARMAGDGDSYVYLAAVQGLAALADALPGWSIPRLVGIFTAAAAXXXXXXXXXXXXXXXSPAXXXXXATPLPLSQRLKIGEAVLLSARRCGDAMPKYAHLFVNAFVVAARERSSDGNXXXXXXXXXXXXXXXXXPGGDAGSASLGSAAVNXXXXXXXXXXXXXXXXXXAAQVNQKPSSSSSLESKERYHFRASCLSNLAEVCQLLRWSLGRFSCDVVDLAAGVLSTETGGSEESTLARRGASFLLGRVLRGAGGDVLEMVPAAELRVAYRALKRAAESDRDEVTRSHARNGLGCLDAAIRGQLFPGGG 1476          
BLAST of mRNA_L-elsbetiae_contig15350.3792.1 vs. uniprot
Match: A0A835YW23_9STRA (RTP1_C1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW23_9STRA)

HSP 1 Score: 281 bits (720), Expect = 5.200e-80
Identity = 226/576 (39.24%), Postives = 298/576 (51.74%), Query Frame = 0
Query:   18 AGLQEAEGRGRAVAELLEGLGEGSPVAGKVFDMLLRRYLSLRDGGEASVAGDSAAAVEERTNFQSEPPVSAEGAAAEQHAVMASVVVLAERLGARVFGTGMQMLSCIRLVLEHEQPRGAVVGAA--GGGPSSDSGDGYVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAESGLDLGLGRAGAGGEDGDSGDTLCSVVLALLTTILELGEEERTPEE--ETELRAMLGPLKGLAARHRSAEVAEMSALLSASILSRGLSPEERREERERVKLGGGSGGDDVEGGETPTA---KMLLALDAAEEDLKSEAVPMRARGVVTLTS---RGGGVRDRV-NIIVAQRLMDTFARMAGDGDSYVYLAAVQGLAALADALPGWCIPPV------AKA--------PLPLSQRLKIGEAVLLSARRCGDAMPKYAHLYVNAFVLAARERKGSAT-SLESKERYHFRASCLSNLAEVCQLLRWSLGRFSQDIVDLGVGILSMETGASEEATLARRGASFLLGRLLRGAGGDVLQVIPAAELRTAYRALKRCAERDPDEVTRSHARNGLGCLDVAIRGQLFPAGGG 567
            A L EAE      AE L  LGE S V G+VF  LLRR+L+LR GG     G                     GA AEQH VM ++ VL E+LG  +  TG+Q+L C+R V++    R A   A      P+SD                                    A   L++ +       ED                                E ELRAML  L  L+ R   AE A+M+A L  SIL+R L+ E+R +E  R +   G+ G    GG++  +   +M  AL   +EDL S  VP+RARGVVTLT           RV ++ V  + +D +  MA D +SYVYLAAVQGL+ L+D  PG+ IP +      A+A        PL L+QRLK+GEAV+ +ARRCG+A PKYA  +V AFV+AARER G  + S+E++ER HFRASCLSNLAEVC LLRWSL  +++D+VDL +G L++ETGA EEAT  RR +++LL R+L G G D   ++P   ++  YRAL+  A    D V R HA+ GL  +D  +  QL   GGG
Sbjct:  579 AALAEAEALADTAAEALGQLGEDSQVGGRVFGGLLRRHLALRSGGGGDGEG---------------------GAVAEQH-VMVALAVLGEKLGPSLLTTGLQILQCLRAVIDFNAQRHASRAAPFLHAPPTSDE--------------------------------PQTASGQLEVEV-------EDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAELRAMLPALAALSERG-GAEAADMAAALRVSILTRDLTLEQRSQETSRAQRMRGTAG----GGDSAASLEERMAAALVDVQEDLSSAQVPLRARGVVTLTRLLRELTAESTRVASLDVLDKFVDIYVLMAQDEESYVYLAAVQGLSVLSDVSPGYVIPTLVSIFCGARAGSADHSAPPLTLAQRLKVGEAVMFAARRCGEAAPKYAQHFVGAFVVAARERVGGDSGSVETRERIHFRASCLSNLAEVCALLRWSLRPYARDVVDLALGALTLETGAGEEATHVRRASAYLLSRILAGTGSDAATIMPDL-IKPVYRALRIVASTVSDGVARFHAKAGLAEIDAIMMQQL---GGG 1084          
BLAST of mRNA_L-elsbetiae_contig15350.3792.1 vs. uniprot
Match: A0A024U9C1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U9C1_9STRA)

HSP 1 Score: 201 bits (511), Expect = 8.060e-52
Identity = 141/367 (38.42%), Postives = 197/367 (53.68%), Query Frame = 0
Query:  200 GEDGDSGDTLCSVVLALLTTILELGEEERTPEEETELRAMLGPLKGLAARHRSAEVAEMSALLSASILSRGLSPEERREERERVKLGGGSGGDDVEGGETPTAKMLLALDAAEEDLKSEAVPMRARGVVTLTSRGGGVRDRVNIIVAQRLMDTFARMAGDGDSYVYLAAVQGLAALADALPGWCIP----PVAKAPLPLSQRLKIGEAVLLSARRCGDAMPKYAHLYVNAFVLAARERKGSATSLESKERYHFRASCLSNLAEVCQLLRWSLGRFSQDIVDLGVGILSMETGASEEATLARRGASFLLGRLLRGAGGDVLQVIPAAELRTAYRALKRCAERDPDEVTRSHARNGLGCLDVAIRGQLF 562
            G+D ++ D L SV L++ TTI++ G   RTP+EE  L  ML PL+ LAA H +A +AEM++ LS  ILSR  +P++                    G ++        +  +  DL+S  VP+RARG+  LT     +R R  +     L+        D DSYVYLAAVQ LA L D      IP     V    + + QR+K+GEA++ +ARRCG  MPKY   +V+ ++   R    +    +S E   FRASCLSNLAEVC LL+W++  +  D+V    GIL  E   ++     RRGA F+L  +L+  G D+L+ IP A +   YR LK  A  + D V R HA NG+  LD  +RG+LF
Sbjct:  597 GDDAENLDVL-SVGLSMATTIVQAGASARTPDEEALLTKMLVPLEQLAA-HPNAPIAEMASDLSLHILSRSAAPDD--------------------GAQSAVVTFDDMMARSNADLQSTQVPLRARGLARLTK---WIRRRKPVNNVDALVQLCIHHLTDADSYVYLAAVQALAGLGDVFADKTIPLLLDAVQDVKVSIEQRIKVGEALVFTARRCGAMMPKYGRAFVHGYLGCIRRHPQATKMQDSLEEATFRASCLSNLAEVCGLLQWAIHPYITDVVACVRGILDTERLTTDAHIALRRGAVFVLYHMLQLFGRDILEAIPDA-MTPIYRLLKHEAASETDPVCRFHAENGVKELDTIMRGELF 937          
BLAST of mRNA_L-elsbetiae_contig15350.3792.1 vs. uniprot
Match: A0A6A5B0I4_9STRA (RTP1_C1 domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5B0I4_9STRA)

HSP 1 Score: 186 bits (473), Expect = 9.910e-50
Identity = 137/362 (37.85%), Postives = 185/362 (51.10%), Query Frame = 0
Query:  211 SVVLALLTTILELGEEERTPEEETELRAMLGPLKGLAARHRSAEVAEMSALLSASILSRGLSPEERREERERVKLGGGSGGDDVEGGETPTAKMLLALDAAEEDLKSEAVPMRARGVVTLTSRGGGVRDRVNIIVAQRLMDTFARMAGDGDSYVYLAAVQGLAALADALPGWCIPPVAKA-----PLPLSQRLKIGEAVLLSARRCGDAMPKYAHLYVNAFVLAARERK--GSATSLESKERYHFRASCLSNLAEVCQLLRWSLGRFSQDIVDLGVGILSMETGASEEATLARRGASFLLGRLLRGAGGDVLQVIPAAELRTAYRALKRCAERDPDEVTRSHARNGLGCLDVAIRGQLFPAG 565
            SV L++ TTI++ G   R+ +EE  L  ML PL+ LA RH  A +AEM++ L   IL+R                   S  D  +   T        LD ++ DL+S  VP+RARG+  LT     +R R  +   + L+        D DSYVYLAAVQ LA L D      IP +  A        + QR+K+ EA+L +ARRCGD MPKY   +V  ++   R R     A  +E       RASCLSNLAEVC LL W++  +  D+V    GIL  E  A++     RRGA F+L  +L+  G D+L+ +P A +   YR LK  A  + D V R HA N +  LD  +RG+LF  G
Sbjct:   57 SVGLSMATTIVQAGAAARSADEEALLTQMLVPLEQLA-RHPKAPIAEMASDLCLHILAR-------------------SADDHKQDVMTAAQSFAEMLDRSKADLQSAQVPLRARGLARLTR---WIRRRQPVDNVEALVALCVHHLADADSYVYLAAVQALAGLGDVYADKTIPLLLDALAQDATYSVEQRIKLSEALLFTARRCGDVMPKYGRAFVFGYLRCIRSRTLPNDANDIEEAT---LRASCLSNLAEVCGLLHWAISPYITDVVGCVRGILETERLATDAHIALRRGAVFVLYNMLQLMGRDILEAVPDA-MTPIYRLLKMEASTEKDAVCRFHAENSVKALDTIMRGELFNVG 391          
BLAST of mRNA_L-elsbetiae_contig15350.3792.1 vs. uniprot
Match: A0A397BHA7_9STRA (RTP1_C1 domain-containing protein n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397BHA7_9STRA)

HSP 1 Score: 190 bits (482), Expect = 6.750e-49
Identity = 140/360 (38.89%), Postives = 190/360 (52.78%), Query Frame = 0
Query:  211 SVVLALLTTILELGEEERTPEEETELRAMLGPLKGLAARHRSAEVAEMSALLSASILSRGLSPEERREERERVKLGGGSGGDDVEGGETPTAKMLLALDAAEEDLKSEAVPMRARGVVTLTSRGGGVRDRVNIIVAQRLMDTFARMAGDGDSYVYLAAVQGLAALADALPGWCIPPVAKA-----PLPLSQRLKIGEAVLLSARRCGDAMPKYAHLYVNAFVLAARERKGSATSLESKERYHFRASCLSNLAEVCQLLRWSLGRFSQDIVDLGVGILSMETGASEEATLARRGASFLLGRLLRGAGGDVLQVIPAAELRTAYRALKRCAERDPDEVTRSHARNGLGCLDVAIRGQLFPAG 565
            SV L++ TTI++ G   R+ +EE  L  ML PL+ LA RH  A +AEM++ L   IL+R     E+                DV       A+ML   D ++ DL+S  VP+RARG+  LT     +R R  +   + L+        D DSYVYLAAVQ LA L D      IP +  A        + QR+K+ EA+L +ARRCGD MPKY   +V  ++   R RK    + E +E    RASCLSNLAEVC LL W++  +  D+V    GIL  E  A++     RRGA F+L  +L+  G D+L+ +P A +   YR LK  A  + D V R HA N +  LD  +RG+LF  G
Sbjct:  326 SVGLSMATTIVQAGAAARSADEEALLTQMLVPLEQLA-RHPKAPIAEMASDLCLHILARSADDHEQ----------------DVMTAAQSFAEML---DRSKADLQSAQVPLRARGLARLTR---WIRRRQPVDNVEALVALCVHHLADADSYVYLAAVQALAGLGDVYADKTIPLLLDALAQDATYSVEQRIKLSEALLFTARRCGDVMPKYGRAFVFGYLRCIRSRKLPNDANEIEEAT-LRASCLSNLAEVCGLLHWAISPYITDVVGCVRGILETERLATDAHIALRRGAVFVLYNMLQLMGRDILEAVPDA-MTPIYRLLKMEASTEKDAVCRFHAENSVKALDTIMRGELFNVG 660          
BLAST of mRNA_L-elsbetiae_contig15350.3792.1 vs. uniprot
Match: A0A1V9ZHW9_9STRA (RTP1_C1 domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZHW9_9STRA)

HSP 1 Score: 193 bits (491), Expect = 6.800e-49
Identity = 147/367 (40.05%), Postives = 202/367 (55.04%), Query Frame = 0
Query:  201 EDGDSGDTLCSVVLALLTTILELGEEERTPEEETELRAMLGPLKGLAARHRSAEVAEMSALLSASILSRGLSPEERREERERVKLGGGSGGDDVEGGETPTAKMLLALDAAEEDLKSEAVPMRARGVVTLTSRGGGVRDRVNIIVAQRLMDTFARMAGDGDSYVYLAAVQGLAALADALPGWCIPPVAKAPLP-----LSQRLKIGEAVLLSARRCGDAMPKYAHLYVNAFVLAARERKGSATSLESKERYHFRASCLSNLAEVCQLLRWSLGRFSQDIVDLGVGILSMETGASEEATLARRGASFLLGRLLRGAGGDVLQVIPAAELRTAYRALKRCAERDPDEVTRSHARNGLGCLDVAIRGQLF 562
            ++ D+ D L  V L ++TTILE+G  ER   EE  LR ML  L+ L++ H   ++AEM+A L   +L+R    EE+ +    +               T T   +LAL  +E+DL S  VP+RARG+V LT     +R R  + VA  LM  F     D +SYVYLA++Q LA+LAD  P   IP +           + QR+K+ EA++ +ARRCG+ +P YA  +V A++ A R       SLE      FRASCLSNLAEVC LLRW++  F  D++    G+L +E G S+     RRGA F+L +LL   G +V + I A  +   YR LK  A  D D V+R HA   L  LDV +RG+LF
Sbjct:  612 DEEDAWDVL-GVCLGMVTTILEVGVRERPAAEEALLRQMLPALEALSS-HTKTDIAEMAAELRLQLLAR----EEQAQPEPTLT--------------TLTFANVLAL--SEKDLASPNVPLRARGLVRLTKL---IRSRQPVDVAA-LMQLFLAQLLDAESYVYLASIQALASLADMHPATAIPLLLATAADTTQHSIDQRIKLSEALMFAARRCGEVLPAYARGFVYAYLHAIRTPTRDVESLEDAT---FRASCLSNLAEVCGLLRWAIHPFLADVLLCVKGVLEVERGRSDAHVALRRGAVFVLHQLLTLMGREVFE-IAAEHMTPIYRMLKLVAT-DSDRVSRFHAEQALSELDVLMRGELF 947          
BLAST of mRNA_L-elsbetiae_contig15350.3792.1 vs. uniprot
Match: K3X8E9_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X8E9_GLOUD)

HSP 1 Score: 190 bits (482), Expect = 7.040e-48
Identity = 175/583 (30.02%), Postives = 268/583 (45.97%), Query Frame = 0
Query:   39 EGSPVAGKVFDMLLRRYLSLRDGGEASVAGDS----AAAVEER--------TNFQSEPPVSAEGAAAEQHAVMASVVVLAERLGARVFGTGMQMLSCIRLVLE-HEQPRGAVVGAAGGGPSSDSGDGYVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAESGLDLGLGRAGAGGE-----DGDSGDTLCSVVLALLTTILELGEEERTPEEETELRAMLGPLKGLAARHRSAEVAEMSALLSASILSRGLSPEERREERERVKLGGGSGGDDVEGGETPTAKMLLALDAAEEDLKSEAVPMRARGVVTLTS---RGGGVR-DRVNIIVAQRLMDTFARMAGDGDSYVYLAAVQGLAALADALPGWCIPPVAKA----PLPLSQRLKIGEAVLLSARRCGDAMPKYAHLYVNAFVLAARERKGSATSLESKERYHF--------------------------------RASCLSNLAEVCQLLRWSLGRFSQDIVDLGVGILSMETGASEEATLARRGASFLLGRLLRGAGGDVLQVIPAAELRTAYRALKRCAERDPDEVTRSHARNGLGCLDVAIRGQLFP 563
            E S V G++F  LL  Y+ +R     S + DS     A +  R        T       +  + A  E   +++ ++ + E LG  V  +   +LSCI  VL  + +P+ ++V         DS D  +                                   ++G G A + G+     +G+S D + ++ L ++ TILE G  +R+  EE +L+AML P+  + + H   E+AE+++     IL+RG   ++ R   +  K                       L  A++DL+S  VP+RARGVV+LT    +   VR D       Q+L+  F     DG+SYV+LAAVQGL+ L+DA P   I  +  A       L +R+K+ EA+L +A+RCG+ +PKYA ++V A++   R  +G +T     +R+                                  RASCLSNLAEVC LL+WSL  F  D++    GIL +E  A+E     RRGA+FLL  L++  G  +L+V+P  +L+  Y  LK     D D V   HAR  L  L+  +R +LFP
Sbjct:  505 ESSEVVGELFSSLLLTYMEVRKQTMPSPSHDSDKEEEAPLSPRKLKDSNSVTQLYKSAKIPTDVAGVEM--ILSLLLAIIESLGPSVLRSAEAILSCIGTVLATYNEPKASIV---------DSTDDSMQSNTLIE----------------------------EVGGGLAASAGKXXXXXEGES-DEILAICLGVVMTILEAGATKRSAAEEAQLQAML-PVLEVLSHHTRPEIAELASDARVKILARGNEDDDNRNASQSTK------------------SFSQVLQEAQDDLRSNLVPLRARGVVSLTKLVRKSQQVRHDPEWTPRIQQLVQIFLTHLEDGESYVFLAAVQGLSTLSDAHPDVAISLLVSALRDRDNSLEKRIKLSEALLFTAKRCGETLPKYAKVFVYAYLDCIRPPRGQSTRRTPSKRFQLIQEIDSSEDKEPEEASVETDAGGDNTLVEATLRASCLSNLAEVCVLLQWSLQPFLVDVMTCVFGILQLELDATESVVAVRRGAAFLLKYLVQLMGWKMLEVMPD-QLKPMYHMLKVVERTDKDSVVVFHARKALEALNDVMRTELFP 1027          
BLAST of mRNA_L-elsbetiae_contig15350.3792.1 vs. uniprot
Match: W4FL01_9STRA (RTP1_C1 domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FL01_9STRA)

HSP 1 Score: 189 bits (481), Expect = 7.820e-48
Identity = 138/360 (38.33%), Postives = 187/360 (51.94%), Query Frame = 0
Query:  211 SVVLALLTTILELGEEERTPEEETELRAMLGPLKGLAARHRSAEVAEMSALLSASILSRGLSPEERREERERVKLGGGSGGDDVEGGETPTAKMLLALDAAEEDLKSEAVPMRARGVVTLTSRGGGVRDRVNIIVAQRLMDTFARMAGDGDSYVYLAAVQGLAALADALPGWCIPPVAKA-----PLPLSQRLKIGEAVLLSARRCGDAMPKYAHLYVNAFVLAARERKGSATSLESKERYHFRASCLSNLAEVCQLLRWSLGRFSQDIVDLGVGILSMETGASEEATLARRGASFLLGRLLRGAGGDVLQVIPAAELRTAYRALKRCAERDPDEVTRSHARNGLGCLDVAIRGQLFPAG 565
            SV L++ TTI++ G   R+ +EE  L  ML PL+ LA RH  A +AEM++ L   IL+R                   S  D  +   T        LD ++ DL+S  VP+RARG+  LT     +R R  +   + L+        D DSYVYLAAVQ LA L D      IP +  A        + QR+K+ EA+L +ARRCGD MPKY   +V  ++   R RK    + E +E    RASCLSNLAEVC LL W++  +  D+V    GIL  E  A++     RRGA F+L  +L+  G D+L+ +P A +   YR LK  A  + D V R HA N +  LD  +RG+LF  G
Sbjct:  612 SVGLSMATTIVQAGAAARSADEEALLTQMLVPLEQLA-RHPKAPIAEMASDLCLHILAR-------------------SADDHKQDVMTAAQSFAEMLDRSKADLQSAQVPLRARGLARLTR---WIRRRQPVDNVEALVALCVHHLADADSYVYLAAVQALAGLGDVYADKTIPLLLDALAQDATYSVEQRIKLSEALLFTARRCGDVMPKYGRAFVFGYLRCIRSRKLPNDANEIEETT-LRASCLSNLAEVCGLLHWAISPYITDVVGCVRGILETERLATDAHIALRRGAVFVLYNMLQLMGRDILEAVPDA-MTPIYRLLKMEASTEKDAVCRFHAENSVKALDTIMRGELFNVG 946          
BLAST of mRNA_L-elsbetiae_contig15350.3792.1 vs. uniprot
Match: A0A5D6Y2F3_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y2F3_9STRA)

HSP 1 Score: 189 bits (479), Expect = 1.800e-47
Identity = 189/595 (31.76%), Postives = 264/595 (44.37%), Query Frame = 0
Query:   39 EGSPVAGKVFDMLLRRYLSLRDGGEASVAGDSAAAVEERTNFQSEP------------PVSAEGAAAEQHAVMASVVVLAERLGARVFGTGMQMLSCIRLVLE-HEQPRGAVVGAAGGGPSSDSGDGYVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAESGLDLGLGRAGAGGEDGDS-----GDTLCSVVLALLTTILELGEEERTPEEETELRAMLGPLKGLAARHRSAEVAEMSALLSASILSRG----LSPEERREERERVKLGGGSGGDDVEGGETPTAKMLLALDAAEEDLKSEAVPMRARGVVTLTSRGGGVR----DRVNIIVAQRLMDTFARMAGDGDSYVYLAAVQGLAALADALPGWCIPPVAKA----PLPLSQRLKIGEAVLLSARRCGDAMPKYAHLYVNAFVLAARERKGSATSLESKERYHF--------------------------------------RASCLSNLAEVCQLLRWSLGRFSQDIVDLGVGILSMETGASEEATLA-RRGASFLLGRLLRGAGGDVLQVIPAAELRTAYRALKRCAERDPDEVTRSHARNGLGCLDVAIRGQLFPA 564
            E S V G++F  LL  YL++R   +A    +S     +R+   S P            P  A G       V++ ++ + E LG  V  +   +LSCI  VLE + + + +VV A      SD                                             G A +   DGDS     GD + ++ L ++ TILE G   R+  EE +LRAML P+  + +RH   E+AE+++     IL RG     SP    +   R   GG    DDV             L  A+ DLKS  VP+RARGVVTLT      +    D       QRL+  F     D +SYV+LAAVQGLAALADA     IP +  A      PL++R+K+ EA+L SA+RCG+ +P +A  +V A++   R    ++  + + +R+                                        RASCLSNLAEVC LL+W L  F  D++    GIL +E  A++    A RRGA F+L  +++  G  VL+V+P  +LR  Y  LK  A  D D V   HA   L  LD  +R +LFPA
Sbjct:  526 ESSEVVGELFASLLLTYLAVRRATDAGEKDES-----DRSPAPSPPAGALSLFEAAKVPTDASGV----EMVLSLLLAIIESLGPSVLRSAGAVLSCIGTVLETYNEAKLSVVDAIHDPQRSD---------------------------------------------GAAISADSDGDSDAQDDGDEMLTICLGVVATILEAGASNRSDAEEAQLRAML-PVLEVLSRHPRPEIAELASDTRVKILVRGGSGGHSPASATDATRR--RGGDRSFDDV-------------LSDAQTDLKSTLVPLRARGVVTLTKLVRASQQQRCDPAWTPRVQRLVGLFLAHLDDPESYVFLAAVQGLAALADAHADVAIPLLVAALRDRSEPLARRIKLSEALLFSAKRCGETLPVHAKTFVFAYLDCIRPPAAASARVGASKRFQLIQEIGGEREGEREEGDGRVAAAVGPGSDGSDPLAEATLRASCLSNLAEVCVLLQWGLQPFVADVMTCVFGILQLELDATQRGAAAVRRGAVFVLKYVVQLLGWKVLEVMPE-QLRPLYHTLKVAARTDSDAVVVFHATQALEALDHVMRAELFPA 1049          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15350.3792.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JPL2_9PHAE2.520e-21063.05RTP1_C1 domain-containing protein n=1 Tax=Ectocarp... [more]
D7FHX3_ECTSI1.670e-20556.98RTP1_C1 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A835YW23_9STRA5.200e-8039.24RTP1_C1 domain-containing protein n=1 Tax=Tribonem... [more]
A0A024U9C1_9STRA8.060e-5238.42Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A6A5B0I4_9STRA9.910e-5037.85RTP1_C1 domain-containing protein n=2 Tax=Aphanomy... [more]
A0A397BHA7_9STRA6.750e-4938.89RTP1_C1 domain-containing protein n=6 Tax=Aphanomy... [more]
A0A1V9ZHW9_9STRA6.800e-4940.05RTP1_C1 domain-containing protein n=1 Tax=Achlya h... [more]
K3X8E9_GLOUD7.040e-4830.02Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
W4FL01_9STRA7.820e-4838.33RTP1_C1 domain-containing protein n=3 Tax=Aphanomy... [more]
A0A5D6Y2F3_9STRA1.800e-4731.76Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019451RNA polymerase II assembly factor Rtp1, C-terminalPFAMPF10363RTP1_C1coord: 309..413
e-value: 6.7E-16
score: 58.5
IPR039600TANGO6/Rtp1PANTHERPTHR20959UNCHARACTERIZEDcoord: 201..565
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 309..554

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig15350contigL-elsbetiae_contig15350:30..3274 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig15350.3792.1mRNA_L-elsbetiae_contig15350.3792.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig15350 3..3274 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig15350.3792.1 ID=prot_L-elsbetiae_contig15350.3792.1|Name=mRNA_L-elsbetiae_contig15350.3792.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=567bp
MELGGEGGAGAGLISALAGLQEAEGRGRAVAELLEGLGEGSPVAGKVFDM
LLRRYLSLRDGGEASVAGDSAAAVEERTNFQSEPPVSAEGAAAEQHAVMA
SVVVLAERLGARVFGTGMQMLSCIRLVLEHEQPRGAVVGAAGGGPSSDSG
DGYVGAAARVARMEAAEAEDAAAAAAAAAGGAGPAESGLDLGLGRAGAGG
EDGDSGDTLCSVVLALLTTILELGEEERTPEEETELRAMLGPLKGLAARH
RSAEVAEMSALLSASILSRGLSPEERREERERVKLGGGSGGDDVEGGETP
TAKMLLALDAAEEDLKSEAVPMRARGVVTLTSRGGGVRDRVNIIVAQRLM
DTFARMAGDGDSYVYLAAVQGLAALADALPGWCIPPVAKAPLPLSQRLKI
GEAVLLSARRCGDAMPKYAHLYVNAFVLAARERKGSATSLESKERYHFRA
SCLSNLAEVCQLLRWSLGRFSQDIVDLGVGILSMETGASEEATLARRGAS
FLLGRLLRGAGGDVLQVIPAAELRTAYRALKRCAERDPDEVTRSHARNGL
GCLDVAIRGQLFPAGGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019451Rtp1_C1
IPR039600TANGO6/Rtp1
IPR016024ARM-type_fold