prot_L-elsbetiae_contig15118.3662.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig15118.3662.1
Unique Nameprot_L-elsbetiae_contig15118.3662.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length129
Homology
BLAST of mRNA_L-elsbetiae_contig15118.3662.1 vs. uniprot
Match: D8LI54_ECTSI (USP domain-containing protein (Fragment) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI54_ECTSI)

HSP 1 Score: 100 bits (250), Expect = 3.340e-22
Identity = 59/125 (47.20%), Postives = 66/125 (52.80%), Query Frame = 0
Query:    1 MDNPAECTALVLYAAEEDRETLSTPTPARGN----ASNTXXXXXXXXXXXXXXXXXXXXXXRAGEHKAEXXXXXXXXXPA---KFVGLSNQGATCYMNSLLQTLYMTPEFRSALYEWKHDTALSS 118
            MDNPA CTALVLYAA+E+    + P  AR +    A N                         G  + +          A   +FVGLSNQGATCYMNSLLQTLYMTPEFRSALYEWKH    SS
Sbjct:    1 MDNPAACTALVLYAADENNTAATAPAAARDSSFDGAENRSAPAAVALGAVGDKIVGSAMKNGGGSEEVQKAAGLASTAVAAVPRFVGLSNQGATCYMNSLLQTLYMTPEFRSALYEWKHGPQSSS 125          
BLAST of mRNA_L-elsbetiae_contig15118.3662.1 vs. uniprot
Match: A0A7S2RKP4_9STRA (Ubiquitin carboxyl-terminal hydrolase (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RKP4_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 3.010e-12
Identity = 31/41 (75.61%), Postives = 37/41 (90.24%), Query Frame = 0
Query:   75 PAKFVGLSNQGATCYMNSLLQTLYMTPEFRSALYEWKHDTA 115
            P+ F GLSNQGATCY+NSLLQ+LYMTPEFR+ALY W++D A
Sbjct:   59 PSSFRGLSNQGATCYLNSLLQSLYMTPEFRAALYSWQYDEA 99          
BLAST of mRNA_L-elsbetiae_contig15118.3662.1 vs. uniprot
Match: A0A2P6NLB9_9EUKA (Ubiquitin carboxyl-terminal hydrolase 47 n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NLB9_9EUKA)

HSP 1 Score: 72.4 bits (176), Expect = 3.130e-12
Identity = 31/37 (83.78%), Postives = 35/37 (94.59%), Query Frame = 0
Query:   78 FVGLSNQGATCYMNSLLQTLYMTPEFRSALYEWKHDT 114
            +VGLSNQGATCYMNSL+QTLYMTPEFR+ALY+W  DT
Sbjct: 1064 YVGLSNQGATCYMNSLIQTLYMTPEFRAALYKWSFDT 1100          
BLAST of mRNA_L-elsbetiae_contig15118.3662.1 vs. uniprot
Match: A0A1R2ANJ0_9CILI (USP domain-containing protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2ANJ0_9CILI)

HSP 1 Score: 70.9 bits (172), Expect = 1.050e-11
Identity = 30/37 (81.08%), Postives = 33/37 (89.19%), Query Frame = 0
Query:   77 KFVGLSNQGATCYMNSLLQTLYMTPEFRSALYEWKHD 113
            KF GLSNQGATCYMNSLLQ+LYMTPEFR  +Y WK+D
Sbjct:   21 KFTGLSNQGATCYMNSLLQSLYMTPEFRQKIYNWKYD 57          
BLAST of mRNA_L-elsbetiae_contig15118.3662.1 vs. uniprot
Match: A0A7S3IYX4_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Euplotes harpa TaxID=151035 RepID=A0A7S3IYX4_9SPIT)

HSP 1 Score: 65.9 bits (159), Expect = 1.640e-11
Identity = 28/39 (71.79%), Postives = 32/39 (82.05%), Query Frame = 0
Query:   77 KFVGLSNQGATCYMNSLLQTLYMTPEFRSALYEWKHDTA 115
            K+ GL NQGATCY+NSL+QTLYMTPEFRS LY W +  A
Sbjct:   25 KYKGLQNQGATCYLNSLMQTLYMTPEFRSILYSWSYKEA 63          
BLAST of mRNA_L-elsbetiae_contig15118.3662.1 vs. uniprot
Match: A0A3Q0J283_DIACI (ubiquitin carboxyl-terminal hydrolase 47-like n=1 Tax=Diaphorina citri TaxID=121845 RepID=A0A3Q0J283_DIACI)

HSP 1 Score: 67.8 bits (164), Expect = 2.020e-11
Identity = 29/60 (48.33%), Postives = 39/60 (65.00%), Query Frame = 0
Query:   61 EHKAEXXXXXXXXXPAKFVGLSNQGATCYMNSLLQTLYMTPEFRSALYEWKHDTALSSPT 120
            EH  E         P  FVGL NQ  TCY+NSL+Q L+MTPEFR+A+Y+WK++  ++  T
Sbjct:   41 EHCEENQLDPSVSNPVNFVGLVNQAMTCYLNSLIQALFMTPEFRNAVYKWKYENDIAEET 100          
BLAST of mRNA_L-elsbetiae_contig15118.3662.1 vs. uniprot
Match: A0A1R2B0T9_9CILI (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2B0T9_9CILI)

HSP 1 Score: 68.6 bits (166), Expect = 6.680e-11
Identity = 30/37 (81.08%), Postives = 33/37 (89.19%), Query Frame = 0
Query:   77 KFVGLSNQGATCYMNSLLQTLYMTPEFRSALYEWKHD 113
            +F GLSNQGATCYMNSLLQTL+MTPEF S LY+WK D
Sbjct:    6 RFTGLSNQGATCYMNSLLQTLFMTPEFLSRLYQWKWD 42          
BLAST of mRNA_L-elsbetiae_contig15118.3662.1 vs. uniprot
Match: A0A1R2BIN5_9CILI (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2BIN5_9CILI)

HSP 1 Score: 68.6 bits (166), Expect = 6.690e-11
Identity = 30/41 (73.17%), Postives = 34/41 (82.93%), Query Frame = 0
Query:   78 FVGLSNQGATCYMNSLLQTLYMTPEFRSALYEWKHDTALSS 118
            FVGLSNQGATCYMNSLLQTLYMTPEFR  +Y+W ++    S
Sbjct:   12 FVGLSNQGATCYMNSLLQTLYMTPEFRREIYKWTYEARHGS 52          
BLAST of mRNA_L-elsbetiae_contig15118.3662.1 vs. uniprot
Match: A0A1R2BW28_9CILI (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2BW28_9CILI)

HSP 1 Score: 68.6 bits (166), Expect = 6.690e-11
Identity = 30/41 (73.17%), Postives = 34/41 (82.93%), Query Frame = 0
Query:   78 FVGLSNQGATCYMNSLLQTLYMTPEFRSALYEWKHDTALSS 118
            FVGLSNQGATCYMNSLLQTLYMTPEFR  +Y+W ++    S
Sbjct:   12 FVGLSNQGATCYMNSLLQTLYMTPEFRREIYKWTYEARHGS 52          
BLAST of mRNA_L-elsbetiae_contig15118.3662.1 vs. uniprot
Match: UPI0018D964EC (ubiquitin carboxyl-terminal hydrolase 47-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D964EC)

HSP 1 Score: 68.6 bits (166), Expect = 6.840e-11
Identity = 29/44 (65.91%), Postives = 36/44 (81.82%), Query Frame = 0
Query:   78 FVGLSNQGATCYMNSLLQTLYMTPEFRSALYEWKHDTALSSPTR 121
            +VGL NQ  TCY+NSLLQTLYMTPEFR+ALY+W  D ++  PT+
Sbjct:  188 YVGLINQAMTCYLNSLLQTLYMTPEFRNALYKWCFDESVEDPTK 231          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15118.3662.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LI54_ECTSI3.340e-2247.20USP domain-containing protein (Fragment) n=2 Tax=E... [more]
A0A7S2RKP4_9STRA3.010e-1275.61Ubiquitin carboxyl-terminal hydrolase (Fragment) n... [more]
A0A2P6NLB9_9EUKA3.130e-1283.78Ubiquitin carboxyl-terminal hydrolase 47 n=1 Tax=P... [more]
A0A1R2ANJ0_9CILI1.050e-1181.08USP domain-containing protein n=1 Tax=Stentor coer... [more]
A0A7S3IYX4_9SPIT1.640e-1171.79Hypothetical protein (Fragment) n=1 Tax=Euplotes h... [more]
A0A3Q0J283_DIACI2.020e-1148.33ubiquitin carboxyl-terminal hydrolase 47-like n=1 ... [more]
A0A1R2B0T9_9CILI6.680e-1181.08Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Sten... [more]
A0A1R2BIN5_9CILI6.690e-1173.17Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Sten... [more]
A0A1R2BW28_9CILI6.690e-1173.17Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Sten... [more]
UPI0018D964EC6.840e-1165.91ubiquitin carboxyl-terminal hydrolase 47-like n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001394Peptidase C19, ubiquitin carboxyl-terminal hydrolasePFAMPF00443UCHcoord: 79..115
e-value: 2.3E-10
score: 40.4
NoneNo IPR availableGENE3D3.90.70.10coord: 55..123
e-value: 3.0E-15
score: 57.8
NoneNo IPR availablePANTHERPTHR24006:SF702UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 47coord: 32..115
NoneNo IPR availablePANTHERPTHR24006FAMILY NOT NAMEDcoord: 32..115
IPR018200Ubiquitin specific protease, conserved sitePROSITEPS00972USP_1coord: 80..95
IPR028889Ubiquitin specific protease domainPROSITEPS50235USP_3coord: 79..129
score: 11.736
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 77..118

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig15118contigL-elsbetiae_contig15118:1926..2820 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig15118.3662.1mRNA_L-elsbetiae_contig15118.3662.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig15118 766..2820 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig15118.3662.1 ID=prot_L-elsbetiae_contig15118.3662.1|Name=mRNA_L-elsbetiae_contig15118.3662.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=129bp
MDNPAECTALVLYAAEEDRETLSTPTPARGNASNTTDTSATRAAVAAGPA
GKDGAEARAGEHKAEDAAAAAAAAPAKFVGLSNQGATCYMNSLLQTLYMT
PEFRSALYEWKHDTALSSPTRGDGEDTRN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001394Peptidase_C19_UCH
IPR018200USP_CS
IPR028889USP_dom
IPR038765Papain-like_cys_pep_sf