prot_L-elsbetiae_contig1510.3658.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1510.3658.1
Unique Nameprot_L-elsbetiae_contig1510.3658.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length646
Homology
BLAST of mRNA_L-elsbetiae_contig1510.3658.1 vs. uniprot
Match: D7G2Z3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z3_ECTSI)

HSP 1 Score: 296 bits (759), Expect = 2.270e-83
Identity = 258/651 (39.63%), Postives = 324/651 (49.77%), Query Frame = 0
Query:   14 LDYEFASSTRGLDILTGDQHIRAGVLVVALVRPTPTPGMPRAVASFPEKALMNLVTDLCDSRYLFSLPRHARLSPRAFQAVKTQLRVGDQRP----RSPSS-PPKTTSAARRDDPRSGDATGDS-GPVTLVVPFDRTTQGGPFPGGGNAAATGPLAAAVAGAPNSDRSVNNSKNHAATFREVGPGSAAAMAAAAEDAARKTGLALEQARATLAAAKKAEVTAAKAAVAAEGTAAVAHQXXXXXXXXXXXXXXXXXXXXXXXXXXXNRDNTSGSATFS---------------GGGPQKGSVNSGEGSPEMGGPRPAGERTTGSPLKISFLAPTHGELLEELAAATSYSSGDTETMTPAEIETMMSRLSSRRRYGHAVDTPGLSTPTARHQGGQEREKPRLLPHHVAKTPTSSNRRGLGWGGWRGGDD-PATSAASGSSSAVARAAGRVPPVADIKTRRL--SLMTRLGRSVEAAWRIPG-GSGKXXXXXXXXXXXXXXXXXXXXXXXXXEGQEETEGVRSLLFSGPGTPGLVVDLWSPGPIFLRHVEEFGDSGCMDAAYALGLWRAGSSFEVVKDATLSSTAPSASKIQSDVYGASRRAFTSEEAMANKLSVSGGECLRNEAVANTASIYSAFLLQVANVYRRPWSEMAGR 639
            L  E  ++TR +D L G ++IR GVL+ ALVRP P+P +PR +A+FP KALMNLVTDLC++RYL +LP  ARLSPRA QAV  QLR   + P    +SP S PP  T+ A    PR+   T D+ GP+TLVVPF    +   FP    A  + P        P     ++N+ N  A        S      AA+DAAR T LA       L +A  A  T        E +A    Q                           + + +S + T+S               GGG     V  G  +  +G     G +   +PLKISFLAP               + G   ++T  E  T+     + RR G AVD+P  ++ T   Q   E+++   L  H A    S +R GLG GGW GG D P T+ AS S S        +P   D    +L   +  RLG S       PG G+G                XX          Q+E + V  LLFSGPGTPGLVVDLWSPGPIFLRHVEEFGD+GCM+AAYALGLWRAGSSF+VV+ A L++        QS  Y   RRAFTS++       V GG CLR++AVA+TASIYSAFL QV NVYRRPWS   GR
Sbjct:  832 LGGEDLAATREMDALKGAKYIRGGVLIAALVRPPPSPDVPRMIATFPRKALMNLVTDLCETRYLLTLPASARLSPRASQAVSAQLRSNRRPPYPVRQSPDSRPPPETNNAGTGGPRAPRRTPDTLGPITLVVPFKTAGEAPQFPKEREAGTSAPYPGDSP--PAGSGGISNTSNKDALPGMGSVSSNVVNDIAAQDAARATSLASGHVGVALGSAPSAGGTIGSG----ENSAVGIGQAAVKDSAAASAGGWGNGFGITSFSDTGSNEASSRTRTYSTALGGDAVGSRLRDQGGGVLPVEVEGGT-TRSVGAGAGVGRQRAATPLKISFLAPA------------GRAPGSNGSVTGRETRTLSRH--NVRRQGPAVDSPRPASVT---QWRTEQQRRGPLESHAAIPSKSGDRAGLGRGGWEGGPDVPVTTTASASLS--------LPGFDDDGEAQLIRDVRRRLGSS-------PGDGAGGQASGSVSDSAVAVGGXXVEME------QDEADWVWELLFSGPGTPGLVVDLWSPGPIFLRHVEEFGDTGCMEAAYALGLWRAGSSFQVVQGARLTTXXXXXXXXQSHDYSRDRRAFTSDQEE-RLFRVPGGACLRSDAVASTASIYSAFLRQVENVYRRPWSRRTGR 1436          
BLAST of mRNA_L-elsbetiae_contig1510.3658.1 vs. uniprot
Match: A0A6H5L1U3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1U3_9PHAE)

HSP 1 Score: 204 bits (520), Expect = 4.980e-52
Identity = 224/651 (34.41%), Postives = 287/651 (44.09%), Query Frame = 0
Query:   14 LDYEFASSTRGLDILTGDQHIRAGVLVVALVRPTPTPGMPRAVASFPEKALMNLVTDLCDSRYLFSLPRHARLSPRAFQAVKTQLRVGDQRP---RSP--------SSPPKTTSAARRDDPRSGDATGDS-GPVTLVVPFDRTTQGGPFPGGGNAAATGPLAAAVAGAPNSDRSVNNSKNHAATFREVGPGSAAAMAAAAEDAARKTGLALEQARATLAAAKKA-------EVTAAKAAVAAEGTAAVAHQXXXXXXXXXXXXXXXXXXXXXXXXXXXN------------RDNTSGSATFSGGGPQKGSVNSGEGSPEMGGPRPAGERTTGSPLKISFLAPTHGELLEELAAATSYSSGDTETMTPAEIETMMSRLSSRRRYGHAVDTPGLSTPTARHQGGQEREKPRLLPHHVAKTPTSS-NRRGLGWGGWRGGDD-PATSAASGSSSAVA-RAAGRVPPVADIKTRRLSLM-----TRLGRSVEAAWRIPGGSGKXXXXXXXXXXXXXXXXXXXXXXXXXEGQEETEGVRSLLFSGPGTPGLVVDLWSPGPIFLRHVEEFGDSGCMDAAYALGLWRAGSSFEVVKDATLSSTAPSASKIQSDVYGASRRAFTSEEAMANKLSVSGGECLRNEAVANTASIYSAFLLQV 625
            LD +  ++TR +D   G +++R GVL+VAL RP P P +PR +A+FP KALMNLVTDLC++RYL +LP  ARL+PRA QAV  QLR   + P   R P        S PP   ++A    PR+   T D+ GP TLVVPF+   +   FP    A  +   A ++   P     ++N+ N           S  A  AAAEDAAR T LA       L +A  A       E +A     AA   +AVA                             +            RD   G       G    S  SG G         AG R   +PLKISFLAP     ++      S +  DT T++   +          RR G  VD+P  ++ T + +  Q R  P   P  +A  P+   +R GLG GG  GG D P T+ AS S S       G    + D++ R  S       +R   SV  +    GG G                             +E + V  LLFSGPGTPGLVVDLWSPGP+FLRHVE                        VV+ A L+ TA     +QS  Y   RRAFTS++       V GG CLR+EAVA+TASIYS FL QV
Sbjct:  766 LDGDDLTATREMDAQKGAKYVRGGVLIVALARPPPRPDVPRMIATFPRKALMNLVTDLCETRYLLALPASARLNPRASQAVSAQLRSNRRPPYPVRQPYPVWQSQDSRPPSKPNSAGTGSPRAPRRTPDTLGPFTLVVPFETAGEAPQFPEEREAGTSASYAWSLYSPPADSGGISNTSNTGELPGIGSVSSTVANDAAAEDAARATSLASRHIGVALGSAPTAGGAIGSGEKSAVGLGQAAVKDSAVASASGWGNGFGITSFSNTGSDETSSRMRGYSTALGGDAVRSRLRDRGGGMLPVEVEGGTIRSAGSGAG---------AGRRRAATPLKISFLAPA----VKAPGRNGSVTGRDTRTLSRHYV----------RRQGPTVDSPRPASVT-QWRTEQLRRGP---PESLATIPSKGGDRAGLGRGGGEGGPDVPITTTASASLSLPGFDDDGEAQLIRDVRRRLGSSPGDGAGSRASGSVSDSAVAAGGGGVF---------------------------DEADWVWELLFSGPGTPGLVVDLWSPGPLFLRHVE------------------------VVQGARLTPTAAVPPPLQSHDYSRDRRAFTSDQEE-RLFRVPGGACLRSEAVASTASIYSVFLRQV 1337          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1510.3658.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G2Z3_ECTSI2.270e-8339.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L1U3_9PHAE4.980e-5234.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1510contigL-elsbetiae_contig1510:20291..24945 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1510.3658.1mRNA_L-elsbetiae_contig1510.3658.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1510 18777..24945 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1510.3658.1 ID=prot_L-elsbetiae_contig1510.3658.1|Name=mRNA_L-elsbetiae_contig1510.3658.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=646bp
MRRSGTGLRQASSLDYEFASSTRGLDILTGDQHIRAGVLVVALVRPTPTP
GMPRAVASFPEKALMNLVTDLCDSRYLFSLPRHARLSPRAFQAVKTQLRV
GDQRPRSPSSPPKTTSAARRDDPRSGDATGDSGPVTLVVPFDRTTQGGPF
PGGGNAAATGPLAAAVAGAPNSDRSVNNSKNHAATFREVGPGSAAAMAAA
AEDAARKTGLALEQARATLAAAKKAEVTAAKAAVAAEGTAAVAHQAAEAA
AAAAAAAAATAVTGRSGGGSHGNRDNTSGSATFSGGGPQKGSVNSGEGSP
EMGGPRPAGERTTGSPLKISFLAPTHGELLEELAAATSYSSGDTETMTPA
EIETMMSRLSSRRRYGHAVDTPGLSTPTARHQGGQEREKPRLLPHHVAKT
PTSSNRRGLGWGGWRGGDDPATSAASGSSSAVARAAGRVPPVADIKTRRL
SLMTRLGRSVEAAWRIPGGSGKGAAPAAAAAADTDTDADADAEAEVEEGQ
EETEGVRSLLFSGPGTPGLVVDLWSPGPIFLRHVEEFGDSGCMDAAYALG
LWRAGSSFEVVKDATLSSTAPSASKIQSDVYGASRRAFTSEEAMANKLSV
SGGECLRNEAVANTASIYSAFLLQVANVYRRPWSEMAGRHDDLDR*
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