prot_L-elsbetiae_contig1508.3640.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1508.3640.1
Unique Nameprot_L-elsbetiae_contig1508.3640.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length614
Homology
BLAST of mRNA_L-elsbetiae_contig1508.3640.1 vs. uniprot
Match: D7FTW6_ECTSI (HTH La-type RNA-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW6_ECTSI)

HSP 1 Score: 598 bits (1543), Expect = 1.660e-207
Identity = 371/543 (68.32%), Postives = 404/543 (74.40%), Query Frame = 0
Query:    7 TAVVMPPSPEAAVGSSSGLPAKTFGGTHHVAGEAVPPAPASEEGSPSPCLPPSPAAAAAAVDGSVSPPAD------------TSGKEDAAE--GPLEQLSDETNAALVKQVEFYFSDENLPTDAFMKKKLKAGGVQGWVPLKVICNFPKVKKLSKDIRAIAAALEGSSSLVVSKATRVRRKTPYKFPDKDGMSDVTARTVVAVNIPAESTVESLTPFFSACGVAEAIRVVHKSKNDGS-----KNSEIQAPVGPNRDLYATCQFSTLEEAIRAVNELTDRKSWRGGLRVSLANGVTVEKALAKLKAAANKKARQEQKDRTTNSRPPAERVEPGGGNVRDGQMRSRSLTELELENAAGXXXXXXXXXXXXGTRMSPPHHTRASREDGXXXXXXXXXXXXXXXXXXXPRSVSNADALYSGSGGCAGGGVENGSPPRHAMGGAGDRLPRKGVVQTLSSEGWSWIKKDGTGSRKSGNRVPFAMADVVMKDGEQ-QPLQKGDHVEYRAWKDSEGRLMAVRVERVKERPRPAGXXXXXXXNRAAQAHFR 529
            TAVV+PPSPE  V SS+ +P  T         E V  APASEE S        P       +G ++P               TSGKED AE   P+E+L ++T AALVKQVEFYFSDENLPTDAFMKKK+KAGG QGWVPLKVIC+FPKVKK+SKDIRAIA ALE S +LVV+KATRVRRKTP+KFPDKDG +DVT+RTVVAVNIPAESTVESLTPFFS+CGVAE IRV+HKSK  G+     ++S IQAP GPNRDLYATCQFSTLEEAIRAVNELTDRKSWRGGLRVSLANGVTVEKALAKLKAA+NKKA+QEQK R  NSR P +R   G  NVRDGQMRSRSLTELELE  AG        XXXX                 XXXXXXXXXX         PRSVSN DAL+S S G +GGG+ENGSPPRH MG AGD LPRKGVVQTLSSEGWSWIKKDG GSRKSGNR+PF M DVVMKDGEQ QPLQKGDHVEYR WKD+EGR MAVRVER KERPRPAG       +R+ QAHFR
Sbjct:    7 TAVVVPPSPEPVVASSAKMPLDT---------ETVA-APASEEAS-------GPVVVEDGENG-LAPXXXXXXXXXXXXXXXTSGKEDTAEVAPPVEELPEDTKAALVKQVEFYFSDENLPTDAFMKKKVKAGGAQGWVPLKVICSFPKVKKMSKDIRAIALALEDSQALVVAKATRVRRKTPFKFPDKDGRADVTSRTVVAVNIPAESTVESLTPFFSSCGVAELIRVIHKSKTAGTTKTDNRSSGIQAPAGPNRDLYATCQFSTLEEAIRAVNELTDRKSWRGGLRVSLANGVTVEKALAKLKAASNKKAKQEQKQRV-NSRSPVDR---GQRNVRDGQMRSRSLTELELERTAGASGGASSRXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXGEAAPTTRKPRSVSNVDALFSSSTGGSGGGIENGSPPRHTMGSAGDGLPRKGVVQTLSSEGWSWIKKDGQGSRKSGNRIPFVMGDVVMKDGEQRQPLQKGDHVEYRVWKDTEGRSMAVRVERAKERPRPAGGAVGSG-SRSTQAHFR 525          
BLAST of mRNA_L-elsbetiae_contig1508.3640.1 vs. uniprot
Match: A0A6H5JW40_9PHAE (HTH La-type RNA-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW40_9PHAE)

HSP 1 Score: 157 bits (397), Expect = 1.500e-36
Identity = 95/139 (68.35%), Postives = 109/139 (78.42%), Query Frame = 0
Query:   44 APASEEGS--------PSPCLPPSPAAAAAAVDGSVSPPADTSGKEDAAEGP-LEQLSDETNAALVKQVEFYFSDENLPTDAFMKKKLKAGGVQGWVPLKVICNFPKVKKLSKDIRAIAAALEGSSSLVVSKATRVRRK 173
            APASEEGS         S   PP+  A++AAV  S     +T+GKED +E P +E+L ++T AALVKQVEFYFSDENLPTDAFMKKK+KAGG QGWVPLKVIC+FPKVKKLSKDIRAIA ALE S +LVV+KATRVRRK
Sbjct: 1116 APASEEGSGPVVAEDGESGLAPPAAMASSAAVVSSD----ETNGKEDTSEAPPVEELPEDTKAALVKQVEFYFSDENLPTDAFMKKKVKAGGAQGWVPLKVICSFPKVKKLSKDIRAIALALEDSQALVVAKATRVRRK 1250          
BLAST of mRNA_L-elsbetiae_contig1508.3640.1 vs. uniprot
Match: A0A5J4Y4J7_9CHLO (La-related 7 n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y4J7_9CHLO)

HSP 1 Score: 140 bits (352), Expect = 4.290e-33
Identity = 79/183 (43.17%), Postives = 115/183 (62.84%), Query Frame = 0
Query:   97 AALVKQVEFYFSDENLPTDAFMKKKLKAGGVQGWVPLKVICNFPKVKKLSKDIRAIAAALEGSSSLVVSKATRVRRKTPYKFPDKDGMSDVTARTVVAVNIPAESTVESLTPFFSACGVAEAIRVVHKSKNDGSKNSEIQ-APVGPNRDLYATCQFSTLEEAIRAVNELTDRKSWRGGLRVSL 278
            A +VKQV FYFSD NLPTD F+ K+++    +GWVP+++I +F ++K LSKDI+ IAAALE S+ LVVS   RVRRK P    D+   ++V  RT +  N+P ++T++SLT  FSA G  + +R+   +    S    I  A +  +R L+A  +F   E+   AV +LTD  +WR GLR ++
Sbjct:   50 AKIVKQVNFYFSDTNLPTDNFLLKEVRKTP-EGWVPIRLIASFKRMKSLSKDIKVIAAALETSTELVVS-GHRVRRKEPLPQVDE---TEVLYRTAIVDNLPDQATIDSLTGMFSAAGKVKMVRICQPNSGPRSIAQSIPGADLAVSRQLHALIEFENQEQVAAAVKQLTDSNNWRSGLRAAI 227          
BLAST of mRNA_L-elsbetiae_contig1508.3640.1 vs. uniprot
Match: C1E3K5_MICCC (Uncharacterized protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E3K5_MICCC)

HSP 1 Score: 134 bits (338), Expect = 8.870e-31
Identity = 88/196 (44.90%), Postives = 118/196 (60.20%), Query Frame = 0
Query:   91 LSDETNAALVKQVEFYFSDENLPTDAFMKKKLKAGGVQGWVPLKVICNFPKVKKLSKD---IRAIAAAL-EGSSSLVVSK-ATRVRRKTPYKFPDKDGMSDVTARTVVAVNIPAESTVESLTPFFSACGVAEAIRVVH---KSKNDGSKNSEIQAPVGPNRDLYATCQFSTLEEAIRAVNELTDRKSWRGGLRVSL 278
            L+DE    +VKQVEFYFSD NLPTDAF+ KK++A    G+VP+ V+C F ++K L K    I  +AA L + S +LVVS+   RVRR TP   PD D + DV ARTVVA N   + T+ES+   FSA G    +RV H   ++    +K S +     P+  ++A  +F+T ++A RA   L D K WR GLRV L
Sbjct:   59 LTDEQVDKIVKQVEFYFSDANLPTDAFLMKKVRADP-NGFVPIGVVCGFNRMKTLLKKHPPIETVAAILRQHSEALVVSEDGIRVRRATP--LPDID-LEDVQARTVVAENFKTQPTIESVRDLFSAAGDVAMVRVRHPGMQTPAGATKPSGLDLIATPSNAVHALIEFNTRDDAARAAETLNDDKDWRNGLRVRL 250          
BLAST of mRNA_L-elsbetiae_contig1508.3640.1 vs. uniprot
Match: D8QWC1_SELML (Uncharacterized protein (Fragment) n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8QWC1_SELML)

HSP 1 Score: 131 bits (329), Expect = 1.050e-30
Identity = 81/197 (41.12%), Postives = 119/197 (60.41%), Query Frame = 0
Query:   91 LSDETNAALVKQVEFYFSDENLPTDAFMKKKLKAGGVQGWVPLKVICNFPKVKKLSKDIRAIAAALEGSSSLVVSK-ATRVRRKTPYKFPDKDGMSDVTARTVVAVNIPAESTVESLTPFFSACGVAEAIRVVHKSKNDGSKNSEIQAPVGPN--------RDLYATCQFSTLEEAIRAVNELTDRKSWRGGLRVSL 278
            LS++T   +V+QVEFYFSD NLPTD ++ K +K    +G+VP+ +I +F K+K+L+K+  A+AAAL  SS LVVS+   +VRR  P    D D   ++  RTVVA N+P + +++SL   F   G  + +RV       GS NS   A +  +          L+A  ++ TLE+A +AV ELTD+++WR GL V L
Sbjct:   76 LSEDTRTQVVQQVEFYFSDANLPTDNYLMKFIKKDP-EGFVPIPIIGSFRKIKQLTKNYGALAAALRSSSKLVVSEDGKKVRRAEPLADIDLD---EIQGRTVVAENLPEDHSIQSLEKLFGTIGSVKMVRVCEP----GSANSVNSAALAKHSKTDRVVSNKLHALVEYETLEQAEKAVAELTDQRNWRSGLHVRL 264          
BLAST of mRNA_L-elsbetiae_contig1508.3640.1 vs. uniprot
Match: A0A7S0IBH0_MICPS (Hypothetical protein (Fragment) n=2 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0IBH0_MICPS)

HSP 1 Score: 131 bits (329), Expect = 2.080e-30
Identity = 86/196 (43.88%), Postives = 117/196 (59.69%), Query Frame = 0
Query:   91 LSDETNAALVKQVEFYFSDENLPTDAFMKKKLKAGGVQGWVPLKVICNFPKVKKLSKD---IRAIAAAL-EGSSSLVVSK-ATRVRRKTPYKFPDKDGMSDVTARTVVAVNIPAESTVESLTPFFSACGVAEAIRVVH---KSKNDGSKNSEIQAPVGPNRDLYATCQFSTLEEAIRAVNELTDRKSWRGGLRVSL 278
            L+DE    +VKQVEFYFSD NLPTDAF+ KK++A    G+VP+ V+C F ++K L K    I  +AA L + S +LVVS+   RV+R TP   PD D + DV ARTVVA N   + T+ES+   FSA G    +RV H   ++    +K S +     P+  ++A  +F T ++A RA   L D + WR GLRV L
Sbjct:   73 LTDEQVDKIVKQVEFYFSDANLPTDAFLMKKVRADP-NGFVPIGVVCGFNRMKTLLKKHPPIETVAAILRQHSEALVVSEDGIRVQRATP--LPDID-LEDVQARTVVAENFKTQPTIESVRDLFSAAGDVAMVRVRHPGMQTPAGATKPSGLDLIATPSNAVHALIEFKTRDDAARAAETLNDDEDWRNGLRVRL 264          
BLAST of mRNA_L-elsbetiae_contig1508.3640.1 vs. uniprot
Match: UPI000D1C965E (la-related protein 6C n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1C965E)

HSP 1 Score: 134 bits (336), Expect = 8.540e-30
Identity = 79/193 (40.93%), Postives = 119/193 (61.66%), Query Frame = 0
Query:   91 LSDETNAALVKQVEFYFSDENLPTDAFMKKKLKAGGVQGWVPLKVICNFPKVKKLSKDIRAIAAALEGSSSLVVSK-ATRVRRKTPYKFPDKDGMSDVTARTVVAVNIPAESTVESLTPFFSACGVAEAIRVVHKSKNDGSKNSEIQAPVGPNR----DLYATCQFSTLEEAIRAVNELTDRKSWRGGLRVSL 278
            LS++T A +V+QVEFYFSD NLPTD ++ K +K    +G+VP+ +I +F K+K+L+K+  A+AAAL  SS LVVS+   +VRR  P    D D   ++  RTVVA N+P + +++SL   F   G  + +RV      +   N+ +      +R     L+A  ++ TLE+A +AV ELTD+++WR GL V L
Sbjct:  173 LSEDTRAQVVQQVEFYFSDANLPTDNYLMKFIKKDP-EGFVPIPIIGSFRKIKQLTKNYGALAAALRSSSKLVVSEDGKKVRRAEPLADIDLD---EIQGRTVVAENLPEDHSIQSLEKLFGTIGSVKMVRVCEPGSANSVNNAALAKHSKTDRVVSNKLHALVEYETLEQAEKAVAELTDQRNWRSGLHVRL 361          
BLAST of mRNA_L-elsbetiae_contig1508.3640.1 vs. uniprot
Match: A0A2R6XE71_MARPO (Uncharacterized protein n=3 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XE71_MARPO)

HSP 1 Score: 133 bits (334), Expect = 1.960e-29
Identity = 76/191 (39.79%), Postives = 123/191 (64.40%), Query Frame = 0
Query:   91 LSDETNAALVKQVEFYFSDENLPTDAFMKKKLKAGGVQGWVPLKVICNFPKVKKLSKDIRAIAAALEGSSSLVVSK-ATRVRRKTPYKFPDKDGMSDVTARTVVAVNIPAESTVESLTPFFSACGVAEAIRVVHKSKNDGSKNS--EIQAPVGPNRDLYATCQFSTLEEAIRAVNELTDRKSWRGGLRVSL 278
            +++E  A +VKQVEFYFSD+NLPTD ++ K +K    +G+VP+ V+ +F K+K L K+   +AAAL  S+ LVVS+   +VRR  P   PD D + +V +RTVVA N+P + ++ES+   F + G  + +R+      +G+  +  + ++ +  +  L+A  +F T+E+A +AV+ LTD ++WR GLRV L
Sbjct:  195 VNEELKAKIVKQVEFYFSDQNLPTDNYLMKFVKKDP-EGFVPIPVVASFRKIKNLVKNHGIVAAALRNSTLLVVSEDGKKVRRAQP--LPDVD-LEEVQSRTVVAENLPEDHSIESVEQLFGSVGNVKMVRICQPEAANGASQTAAKFKSDMVVSNKLHALIEFETVEQAEKAVSALTDERNWRSGLRVRL 381          
BLAST of mRNA_L-elsbetiae_contig1508.3640.1 vs. uniprot
Match: A0A2K1LA96_PHYPA (Uncharacterized protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1LA96_PHYPA)

HSP 1 Score: 132 bits (332), Expect = 5.660e-29
Identity = 78/192 (40.62%), Postives = 118/192 (61.46%), Query Frame = 0
Query:   91 LSDETNAALVKQVEFYFSDENLPTDAFMKKKLKAGGVQGWVPLKVICNFPKVKKLSKDIRAIAAALEGSSSLVVSK-ATRVRRKTPYKFPDKDGMSDVTARTVVAVNIPAESTVESLTPFFSACGVAEAIRVVHKSKNDGSKNSEIQAPVGP---NRDLYATCQFSTLEEAIRAVNELTDRKSWRGGLRVSL 278
            L++ET A +VKQVEFYFSD NLPTD ++ K +K    +G+VP+ V+ +F K+K L K+   +AA L  S+ LVVS+   +VRR  P   P+ D + ++ ARTVVA N+P + ++ESL   F   G  + +R+      +G+  +  + P      +  L+A  ++ T+E A +AV ELTD ++WR GLRV L
Sbjct:  241 LTEETKAKIVKQVEFYFSDTNLPTDNYLMKFVKKDS-EGFVPIPVVASFRKIKNLVKNHGVLAATLRNSTQLVVSEDGKKVRRAHP--LPEVD-LEEIQARTVVAENLPEDHSIESLEQLFGKVGTVKMVRICSPEAANGANATGAKHPKTDMLVSNKLHALVEYETVELAEKAVAELTDERNWRSGLRVRL 428          
BLAST of mRNA_L-elsbetiae_contig1508.3640.1 vs. uniprot
Match: C1N3J9_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1N3J9_MICPC)

HSP 1 Score: 128 bits (322), Expect = 2.020e-28
Identity = 82/201 (40.80%), Postives = 114/201 (56.72%), Query Frame = 0
Query:   91 LSDETNAALVKQVEFYFSDENLPTDAFMKKKLKAGGVQGWVPLKVICNFPKVKKLSK----DIRAIAAALEGSSSLVVSKA-TRVRRKTPYKFPDKDGMSDVTARTVVAVNIPAES-----TVESLTPFFSACGVAEAIRVVHKSKND-----GSKNSEIQAPVGPNRDLYATCQFSTLEEAIRAVNELTDRKSWRGGLRV 276
            L+ E    +  QVEFYFSD NLPTDAF+ KK++AGG +GWVPL VIC+F ++K+L K     +     A  GS+ LV   A T VRR  P   PD D + +V +RTV+A N P  +     T+E++   F++ G    +RV H           +K+S +     PN  ++A  +F T EEA+RAV  L + + WR GLRV
Sbjct:   73 LTAEQKEKIFAQVEFYFSDANLPTDAFLMKKVRAGGDEGWVPLDVICSFNRMKQLLKKRPHSVVCDVLAELGSALLVSDDAKTAVRRVAP--LPDVD-LEEVQSRTVLAENFPGVNAGEAPTIEAVRELFASAGEVLVVRVRHPGMTQPAGVAAAKSSGLDLIQTPNAHVHALVEFKTAEEALRAVTTLNNDRDWRNGLRV 270          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1508.3640.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTW6_ECTSI1.660e-20768.32HTH La-type RNA-binding domain-containing protein ... [more]
A0A6H5JW40_9PHAE1.500e-3668.35HTH La-type RNA-binding domain-containing protein ... [more]
A0A5J4Y4J7_9CHLO4.290e-3343.17La-related 7 n=1 Tax=Trebouxia sp. A1-2 TaxID=2608... [more]
C1E3K5_MICCC8.870e-3144.90Uncharacterized protein n=1 Tax=Micromonas commoda... [more]
D8QWC1_SELML1.050e-3041.12Uncharacterized protein (Fragment) n=2 Tax=Selagin... [more]
A0A7S0IBH0_MICPS2.080e-3043.88Hypothetical protein (Fragment) n=2 Tax=Micromonas... [more]
UPI000D1C965E8.540e-3040.93la-related protein 6C n=2 Tax=Selaginella moellend... [more]
A0A2R6XE71_MARPO1.960e-2939.79Uncharacterized protein n=3 Tax=Marchantia polymor... [more]
A0A2K1LA96_PHYPA5.660e-2940.63Uncharacterized protein n=1 Tax=Physcomitrium pate... [more]
C1N3J9_MICPC2.020e-2840.80Predicted protein n=1 Tax=Micromonas pusilla (stra... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 284..304
NoneNo IPR availableGENE3D2.40.50.140coord: 433..508
e-value: 6.0E-6
score: 28.1
NoneNo IPR availablePANTHERPTHR22792:SF102LA-RELATED PROTEIN 6Acoord: 86..311
NoneNo IPR availablePANTHERPTHR22792LUPUS LA PROTEIN-RELATEDcoord: 86..311
IPR006630La-type HTH domainSMARTSM00715lacoord: 93..173
e-value: 6.5E-29
score: 112.1
IPR006630La-type HTH domainPFAMPF05383Lacoord: 99..157
e-value: 1.4E-22
score: 79.5
IPR006630La-type HTH domainPROSITEPS50961HTH_LAcoord: 89..182
score: 24.387
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 181..286
e-value: 8.3E-8
score: 34.3
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 91..179
e-value: 9.7E-27
score: 94.6
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 92..180
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 187..280

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1508contigL-elsbetiae_contig1508:2960..11760 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1508.3640.1mRNA_L-elsbetiae_contig1508.3640.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1508 2900..11953 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1508.3640.1 ID=prot_L-elsbetiae_contig1508.3640.1|Name=mRNA_L-elsbetiae_contig1508.3640.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=614bp
MEAGSGTAVVMPPSPEAAVGSSSGLPAKTFGGTHHVAGEAVPPAPASEEG
SPSPCLPPSPAAAAAAVDGSVSPPADTSGKEDAAEGPLEQLSDETNAALV
KQVEFYFSDENLPTDAFMKKKLKAGGVQGWVPLKVICNFPKVKKLSKDIR
AIAAALEGSSSLVVSKATRVRRKTPYKFPDKDGMSDVTARTVVAVNIPAE
STVESLTPFFSACGVAEAIRVVHKSKNDGSKNSEIQAPVGPNRDLYATCQ
FSTLEEAIRAVNELTDRKSWRGGLRVSLANGVTVEKALAKLKAAANKKAR
QEQKDRTTNSRPPAERVEPGGGNVRDGQMRSRSLTELELENAAGGGGGSG
GGGGRGGTRMSPPHHTRASREDGGSSGDGDGGEETPAATRRKPRSVSNAD
ALYSGSGGCAGGGVENGSPPRHAMGGAGDRLPRKGVVQTLSSEGWSWIKK
DGTGSRKSGNRVPFAMADVVMKDGEQQPLQKGDHVEYRAWKDSEGRLMAV
RVERVKERPRPAGGGGGGGGNRAAQAHFRMAAGPEEGKSGFAAGRGRPIV
VAPSPAGGGVGGTAGNDVLRRPRGSSMGGVDSKVFVPSSPPVAVVVVPAE
VPVPSPQQFEDAD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006630La_HTH
IPR012677Nucleotide-bd_a/b_plait_sf
IPR036388WH-like_DNA-bd_sf
IPR036390WH_DNA-bd_sf
IPR035979RBD_domain_sf